BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0224800 Os05g0224800|AK111685
(304 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19020.1 | chr4:10414526-10420936 FORWARD LENGTH=1296 335 3e-92
AT1G69770.1 | chr1:26248496-26253519 REVERSE LENGTH=840 298 2e-81
AT1G80740.1 | chr1:30342394-30346831 FORWARD LENGTH=792 244 4e-65
AT4G08990.1 | chr4:5764781-5770496 FORWARD LENGTH=1513 129 2e-30
AT4G14140.2 | chr4:8146345-8152131 FORWARD LENGTH=1546 129 2e-30
AT5G49160.1 | chr5:19932501-19938186 FORWARD LENGTH=1535 122 3e-28
AT4G13610.1 | chr4:7915022-7921231 FORWARD LENGTH=1405 106 2e-23
>AT4G19020.1 | chr4:10414526-10420936 FORWARD LENGTH=1296
Length = 1295
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/297 (55%), Positives = 213/297 (71%), Gaps = 2/297 (0%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQ 60
M AGCYGL QFR RVF+ G + LPPFPLPTH+ IV+ G PL FERN+V + P +
Sbjct: 990 MTAGCYGLSQFRSRVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRK 1049
Query: 61 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSKS 120
L + +VL+D +SDLP V+N E R+++ Y P+T+FQRYIRS ++ G A + ++
Sbjct: 1050 LEKALVLKDAISDLPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGS-AIDNCNKRT 1108
Query: 121 SKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPSGRP 180
L+DHRP ++ D+Y R+ QIPKRKGANFRDL G+IV + V R DP+ E V+LPSG+P
Sbjct: 1109 MLLHDHRPFHINEDDYARVCQIPKRKGANFRDLPGLIVRNNTVCR-DPSMEPVILPSGKP 1167
Query: 181 LVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESARLQG 240
LV + ++ GKS RPF R+WWDE V TVLTVP QAL+HP QDR+LTIRESARLQG
Sbjct: 1168 LVPGYVFTFQQGKSKRPFARLWWDETVPTVLTVPTCHSQALLHPEQDRVLTIRESARLQG 1227
Query: 241 FPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAYLKKSGDDPLMLLPPNFAFS 297
FPD ++F GT+K+RY QIGNAVAV V RALGY+L MA+ + D+ L+ LP NF+ S
Sbjct: 1228 FPDYFQFCGTIKERYCQIGNAVAVSVSRALGYSLGMAFRGLARDEHLIKLPQNFSHS 1284
>AT1G69770.1 | chr1:26248496-26253519 REVERSE LENGTH=840
Length = 839
Score = 298 bits (763), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 200/297 (67%), Gaps = 3/297 (1%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQ 60
MAAG YGL QFR+R FL G E +P FPLPTH+ + + F+ N+V + ++
Sbjct: 535 MAAGAYGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVK 594
Query: 61 LARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKDSKS 120
LA ++L+D++SDLP VAN E RDE+ Y K P T FQ++IR E + SK
Sbjct: 595 LADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDE--ASGSQSKSKSKK 652
Query: 121 SKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPSGRP 180
LYDH PL L+ ++Y+R+ Q+PKRKGANFRD GVIVGP NV +L+ KERV L SG+
Sbjct: 653 HVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKT 712
Query: 181 LVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESARLQG 240
LV D L Y +GKS +PFGR+WWDE+V TV+T Q +IHP Q+R+L+IRE+ARLQG
Sbjct: 713 LVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQG 772
Query: 241 FPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAYLKKS-GDDPLMLLPPNFAF 296
FPD+Y+ G K +Y Q+GNAVAVPV +ALGYAL A+ + G DPL+ LP FAF
Sbjct: 773 FPDDYKLFGPPKQKYIQVGNAVAVPVAKALGYALGTAFQGLAVGKDPLLTLPEGFAF 829
>AT1G80740.1 | chr1:30342394-30346831 FORWARD LENGTH=792
Length = 791
Score = 244 bits (623), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 185/292 (63%), Gaps = 6/292 (2%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKNGCPLAFERNLVGWPNDTPMQ 60
MAAG YGLPQ R RVFL EKLPP+PLPTHE K P F+ VG ++
Sbjct: 492 MAAGSYGLPQLRNRVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQVGRIQMEFLK 551
Query: 61 LARPIVLEDILSDLPEVANGESRDEMLYVKG-PQTEFQRYIRSFNVEVHGPRAHVTKDSK 119
L + L D +SDLP V N + D M Y P+TEF+ +I E P
Sbjct: 552 LDNALTLADAISDLPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLP---AFGGDP 608
Query: 120 SSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPSGR 179
+ +L+DH+PLVL +D+ +R+ IPK+KGAN+RD+ GV+V +N A ++P + R L SG+
Sbjct: 609 TRRLFDHQPLVLGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINP-RFRAKLKSGK 666
Query: 180 PLVLDCILAYENGKSLRPFGRVWWDEVVGTVLTVPNARMQALIHPAQDRLLTIRESARLQ 239
+V +++ GKS +PFGR+W DE+V TV+T Q +IHP Q+R+L++RE+ARLQ
Sbjct: 667 NVVPAYAISFIKGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVLSVRENARLQ 726
Query: 240 GFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMAYLKKSGDDPLMLLP 291
GFPD Y+ GT+K++Y Q+GNAVAVPVG ALGYA MA + D+P++ LP
Sbjct: 727 GFPDCYKLCGTIKEKYIQVGNAVAVPVGVALGYAFGMASQGLTDDEPVIKLP 778
>AT4G08990.1 | chr4:5764781-5770496 FORWARD LENGTH=1513
Length = 1512
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 141/297 (47%), Gaps = 53/297 (17%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKN-GCPLAFERNLVGWPNDTPM 59
+ AG YG+ Q R RV + +E LP +P P H + N G ++ R G DT
Sbjct: 1249 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMH--VFDNPGSKISLPR---GLHYDTVR 1303
Query: 60 QLA-----RPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHV 114
R I + D + DLP V NGES+ Y P + FQ+ IR N+ V
Sbjct: 1304 NTKFGAPFRSITVRDTIGDLPLVENGESKINKEYRTTPVSWFQKKIRG-NMSV------- 1355
Query: 115 TKDSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVL 174
L DH L+ N R +IPKR GA++RDL PD E V
Sbjct: 1356 --------LTDHICKGLNELNLIRCKKIPKRPGADWRDL------PD---------ENVT 1392
Query: 175 LPSG-----RPLVLDCILAYENG-KSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQ 226
L +G RPL L N K L +GR+ W + +T P ++ HP Q
Sbjct: 1393 LSNGLVEKLRPLALSKTAKNHNEWKGL--YGRLDWQGNLPISITDPQPMGKVGMCFHPEQ 1450
Query: 227 DRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA-YLKKS 282
DR++T+RE AR QGFPD+Y F GT K ++RQIGNAV P+ ALG L A YLK S
Sbjct: 1451 DRIITVRECARSQGFPDSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLKEALYLKSS 1507
>AT4G14140.2 | chr4:8146345-8152131 FORWARD LENGTH=1546
Length = 1545
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 139/289 (48%), Gaps = 37/289 (12%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKN-GCPLAFERNLV--GWPNDT 57
+ AG YG+ Q R RV + +E LP +P P H + N G ++ R L N
Sbjct: 1282 LEAGTYGVSQPRKRVIIWAASPEEVLPEWPEPMH--VFDNPGSKISLPRGLRYDAGCNTK 1339
Query: 58 PMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKD 117
R I + D + DLP V NGES+ Y P + FQ+ IR N+ V
Sbjct: 1340 FGAPFRSITVRDTIGDLPPVENGESKINKEYGTTPASWFQKKIRG-NMSV---------- 1388
Query: 118 SKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPS 177
L DH L+ N R +IPKR GA++RDL PD + T L+
Sbjct: 1389 -----LTDHICKGLNELNLIRCKKIPKRPGADWRDL------PDE----NVTLSNGLVEK 1433
Query: 178 GRPLVLDCILAYENG-KSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHPAQDRLLTIRE 234
RPL L N K L +GR+ W + +T P ++ HP QDR++T+RE
Sbjct: 1434 LRPLALSKTAKNHNEWKGL--YGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRE 1491
Query: 235 SARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA-YLKKS 282
AR QGFPD+Y F GT K ++RQIGNAV P+ ALG L A YLK S
Sbjct: 1492 CARSQGFPDSYEFSGTTKHKHRQIGNAVPPPLAFALGRKLKEALYLKSS 1540
>AT5G49160.1 | chr5:19932501-19938186 FORWARD LENGTH=1535
Length = 1534
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 134/299 (44%), Gaps = 57/299 (19%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTH-------EAIVKNGCPLAFERNL-VG 52
+ AG YG+ Q R R F+ +E LP +P P H + + G A R+ +G
Sbjct: 1271 LEAGAYGVSQSRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALG 1330
Query: 53 WPNDTPMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRA 112
P RPI + D + DLP V NG+SR Y + + FQ+ IR +
Sbjct: 1331 AP-------FRPITVRDTIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNTI------- 1376
Query: 113 HVTKDSKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKER 172
L DH ++ N R IP R GA++ DL K +
Sbjct: 1377 ---------ALTDHICKAMNELNLIRCKLIPTRPGADWHDLP---------------KRK 1412
Query: 173 VLLPSGR-----PLVLDCILAYENG-KSLRPFGRVWWDEVVGTVLTVPN--ARMQALIHP 224
V L GR P L NG K L +GR+ W T +T P ++ HP
Sbjct: 1413 VTLSDGRVEEMIPFCLPNTAERHNGWKGL--YGRLDWQGNFPTSVTDPQPMGKVGMCFHP 1470
Query: 225 AQDRLLTIRESARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA-YLKKS 282
Q R+LT+RE AR QGFPD+Y F G + ++RQIGNAV P+ ALG L A +LKKS
Sbjct: 1471 EQHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKLKEALHLKKS 1529
>AT4G13610.1 | chr4:7915022-7921231 FORWARD LENGTH=1405
Length = 1404
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 46/282 (16%)
Query: 1 MAAGCYGLPQFRMRVFLLGCHSKEKLPPFPLPTHEAIVKN---GCPLAFERNLVGWPNDT 57
+ AG YG+ Q R R F+ E LP +P P H + N PL+ + +
Sbjct: 1158 LEAGAYGISQPRKRAFIWAAAPNEVLPEWPEPMH--VFNNPGFKIPLSQGLHYAAVQSTK 1215
Query: 58 PMQLARPIVLEDILSDLPEVANGESRDEMLYVKGPQTEFQRYIRSFNVEVHGPRAHVTKD 117
R I + D + DLP + +GES+ ++G T
Sbjct: 1216 FGAPFRSITVRDAIGDLPPIESGESKINKEEMRGSMT----------------------- 1252
Query: 118 SKSSKLYDHRPLVLDNDNYQRILQIPKRKGANFRDLSGVIVGPDNVARLDPTKERVLLPS 177
L DH ++ N R +IPK GA++RDL PD L + ++P+
Sbjct: 1253 ----VLTDHICKKMNELNLIRCKKIPKTPGADWRDL------PDEHVNLSNGIVKNIVPN 1302
Query: 178 GRPLVLDCILAYENGKSLRPFGRVWWDEVVGTVLT--VPNARMQALIHPAQDRLLTIRES 235
+L+ + K L +GR+ W + T +T P + HP QDR++++RE
Sbjct: 1303 ----LLNKAKDHNGYKGL--YGRLDWHGNLPTCITNLQPMGLVGMCFHPDQDRIISVREC 1356
Query: 236 ARLQGFPDNYRFRGTVKDRYRQIGNAVAVPVGRALGYALAMA 277
AR QGFPD+Y+F G +KD++RQ+GNAV P+ ALG L A
Sbjct: 1357 ARSQGFPDSYKFSGNIKDKHRQVGNAVPPPLAFALGRKLKEA 1398
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.141 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,145,062
Number of extensions: 312776
Number of successful extensions: 643
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 627
Number of HSP's successfully gapped: 7
Length of query: 304
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 206
Effective length of database: 8,419,801
Effective search space: 1734479006
Effective search space used: 1734479006
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)