BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0219900 Os05g0219900|AK120886
(622 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G24030.1 | chr5:8118618-8120993 REVERSE LENGTH=636 568 e-162
AT4G27970.1 | chr4:13918290-13920122 REVERSE LENGTH=520 529 e-150
AT1G12480.1 | chr1:4257427-4259249 REVERSE LENGTH=557 412 e-115
AT1G62280.1 | chr1:23007309-23008540 REVERSE LENGTH=386 217 2e-56
AT1G62262.1 | chr1:23000318-23001491 REVERSE LENGTH=366 210 2e-54
>AT5G24030.1 | chr5:8118618-8120993 REVERSE LENGTH=636
Length = 635
Score = 568 bits (1463), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/410 (67%), Positives = 326/410 (79%), Gaps = 7/410 (1%)
Query: 175 RDKRYDSFKTWSGKLERQLTHL-AGVGPEAPVDKERGDAIGSHHTSSLPKVDRFFAALEG 233
+D RY+SFKTWSGKLERQ T A V PEAP + ++P VDR++ ALEG
Sbjct: 178 KDNRYNSFKTWSGKLERQFTRKPASVEPEAPNRNNQNLNT----NEAMP-VDRYYDALEG 232
Query: 234 PELDQLKSEEELVLPSDKTWPFLLRFPVSAFGMCLGVSSQAILWKTIATSGPTAFLHVTT 293
PEL+ L+ +EE+VLP+DK WPFLLR+P+S FGMCLGVSSQAI+WKT+AT+ PT FLHV
Sbjct: 233 PELETLRPQEEIVLPNDKKWPFLLRYPISTFGMCLGVSSQAIMWKTLATAEPTKFLHVPL 292
Query: 294 KVNLVLWCVSVALMCAISATYGAKVVFFFEAVRREYYHPIRVNFFFAPWIACLFLTIGVP 353
+N LW +SVAL+ I+ Y K++ FFEAVRREYYHPIR+NFFFAP+I+ LFL +GVP
Sbjct: 293 WINQGLWFISVALILTIATIYLLKIILFFEAVRREYYHPIRINFFFAPFISLLFLALGVP 352
Query: 354 DSVAPTLLPHWLWYALMAPVLCLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALL 413
S+ T LPH+LWY LM P +CLELKIYGQWMSGGQRRLS+VANP+NHLSVVGNFVGALL
Sbjct: 353 PSII-TDLPHFLWYLLMFPFICLELKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALL 411
Query: 414 GASMGLREGPVFFFAVGMAHYSVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAW 473
GASMGLREGP+FF+AVGMAHY VLFVTLYQRLPTNETLPK+LHPVFFLFVAAPSVASMAW
Sbjct: 412 GASMGLREGPIFFYAVGMAHYLVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASMAW 471
Query: 474 ARITGEFGLGSRVAYFIAMFLYASLAVRINFFRGFRFSLAWWAYTFPMTGAAIASIRYST 533
A++TG F GS+V YFIA+FLY SLAVRINFFRG +FSL+WWAYTFPMTGAAIA+IRY+T
Sbjct: 472 AKVTGSFDYGSKVCYFIAIFLYFSLAVRINFFRGIKFSLSWWAYTFPMTGAAIATIRYAT 531
Query: 534 EVDNALTRXXXXXXXXXXXXXXXXXXXXXMIHAFVLHKLFPNDIAIAITD 583
V + +T+ +IHAFVL LFPND+AIAI++
Sbjct: 532 VVKSTMTQIMCVVLCAIATLVVFALLVTTIIHAFVLRDLFPNDLAIAISN 581
>AT4G27970.1 | chr4:13918290-13920122 REVERSE LENGTH=520
Length = 519
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/472 (57%), Positives = 332/472 (70%), Gaps = 23/472 (4%)
Query: 125 PLHSPASQAK--------GGGNGVRF---VQPERMMFLSQPIPGGQPSXXXXXXXXXXXM 173
PL SPA+ + G G+ R + +M F S+ +P G
Sbjct: 9 PLVSPANHSDLLENQRQSGSGDFSRLEKRIGARKMKFHSKSMPRG----AMFLDQEASRN 64
Query: 174 CRDKRYDSFKTWSGKLERQLTHLAGVGPEAPVDKERGDAIGSHHTSSLPKVDRFFAALEG 233
DKRYD F+T SGKLERQ+++L G E+ + + T SL DR+F AL+G
Sbjct: 65 FHDKRYDLFRTMSGKLERQISNLRGKPTESSLQDHK------EITESL-TADRYFDALQG 117
Query: 234 PELDQLKSEEELVLPSDKTWPFLLRFPVSAFGMCLGVSSQAILWKTIATSGPTAFLHVTT 293
PEL+ LK +E++VLP DKTWPFLLRFP++++GMCLGVSSQAI+WKT+AT+ FLHVT
Sbjct: 118 PELETLKEKEKIVLPEDKTWPFLLRFPITSYGMCLGVSSQAIMWKTLATTEAEKFLHVTQ 177
Query: 294 KVNLVLWCVSVALMCAISATYGAKVVFFFEAVRREYYHPIRVNFFFAPWIACLFLTIGVP 353
+N VLW +S+ L+ A+S TY K + FFEAVRRE+ HPIRVNFFFAP I+ LFL +G+P
Sbjct: 178 VINHVLWWISLLLLLAVSITYLFKTILFFEAVRREFRHPIRVNFFFAPLISILFLALGIP 237
Query: 354 DSVAPTLLPHWLWYALMAPVLCLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALL 413
S+ + LP LWY LMAP+L LE+KIYGQWMSGGQRRLSKVANP+NHLS+VGNF GALL
Sbjct: 238 HSII-SHLPSTLWYFLMAPILFLEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALL 296
Query: 414 GASMGLREGPVFFFAVGMAHYSVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAW 473
GASMGL+EGP+FFFA+G+A+Y VLFVTLYQRLPTNETLPKELHPVFFLFVAAP+VASMAW
Sbjct: 297 GASMGLKEGPIFFFAIGLAYYLVLFVTLYQRLPTNETLPKELHPVFFLFVAAPAVASMAW 356
Query: 474 ARITGEFGLGSRVAYFIAMFLYASLAVRINFFRGFRFSLAWWAYTFPMTGAAIASIRYST 533
+I+ F LGSR+AYFI++FLY SL RIN FRGF+FSLAWWAYTFPMT A A+I+YS
Sbjct: 357 TKISASFDLGSRLAYFISLFLYFSLVCRINLFRGFKFSLAWWAYTFPMTAVASATIKYSD 416
Query: 534 EVDNALTRXXXXXXXXXXXXXXXXXXXXXMIHAFVLHKLFPNDIAIAITDGQ 585
EV T+ ++HAFV LFPND+ IAI+ Q
Sbjct: 417 EVTGVATKILSVVMSGAATLTVIAVLGLTVMHAFVQRDLFPNDVVIAISAEQ 468
>AT1G12480.1 | chr1:4257427-4259249 REVERSE LENGTH=557
Length = 556
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/413 (51%), Positives = 278/413 (67%), Gaps = 6/413 (1%)
Query: 175 RDKRYDSFKTWSGKLERQLTHLAGVGPEAPVDKERGDAIGSHHTSSLPK---VDRFFAAL 231
R + F+T S L +Q + L + E ++ G S+ + R+FAAL
Sbjct: 102 RKTDFSMFRTKS-TLSKQKSLLPSIIRERDIENSLRTEDGETKDDSINENVSAGRYFAAL 160
Query: 232 EGPELDQLKSEEELVLPSDKTWPFLLRFPVSAFGMCLGVSSQAILWKTIATSGPTAFLHV 291
GPELD++K E+++LP ++ WPFLLRFP+ FG+CLG+SSQA+LW +A S T FLH+
Sbjct: 161 RGPELDEVKDNEDILLPKEEQWPFLLRFPIGCFGICLGLSSQAVLWLALAKSPATNFLHI 220
Query: 292 TTKVNLVLWCVSVALMCAISATYGAKVVFFFEAVRREYYHPIRVNFFFAPWIACLFLTIG 351
T +NLV+W S+ ++ ++S TY K +F+FEAV+REY+HP+RVNFFFAPW+ C+FL I
Sbjct: 221 TPLINLVVWLFSLVVLVSVSFTYILKCIFYFEAVKREYFHPVRVNFFFAPWVVCMFLAIS 280
Query: 352 VPDSVAPT--LLPHWLWYALMAPVLCLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFV 409
VP +P L +W M P LELKIYGQW+SGG+RRL KVANPS+HLSVVGNFV
Sbjct: 281 VPPMFSPNRKYLHPAIWCVFMGPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFV 340
Query: 410 GALLGASMGLREGPVFFFAVGMAHYSVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVA 469
GA+L + +G E F +AVG AHY V+FVTLYQRLPT+E LPKELHPV+ +F+AAPS A
Sbjct: 341 GAILASKVGWDEVAKFLWAVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAA 400
Query: 470 SMAWARITGEFGLGSRVAYFIAMFLYASLAVRINFFRGFRFSLAWWAYTFPMTGAAIASI 529
S+AW I G+F SR +FIA+FLY SL RINFF GF+FS+AWW+YTFPMT A++A+I
Sbjct: 401 SIAWNTIYGQFDGCSRTCFFIALFLYISLVARINFFTGFKFSVAWWSYTFPMTTASVATI 460
Query: 530 RYSTEVDNALTRXXXXXXXXXXXXXXXXXXXXXMIHAFVLHKLFPNDIAIAIT 582
+Y+ V +R ++HAFV LFPND+AIAIT
Sbjct: 461 KYAEAVPGYPSRALALTLSFISTAMVCVLFVSTLLHAFVWQTLFPNDLAIAIT 513
>AT1G62280.1 | chr1:23007309-23008540 REVERSE LENGTH=386
Length = 385
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 173/280 (61%), Gaps = 6/280 (2%)
Query: 264 FGMCLGVSSQAILWKTIATSGPTAFLHVTTKV----NLVLWCVSVALMCAISATYGAKVV 319
F + L + SQA+LWK + + H+ +K+ +LW +++ ++ Y K +
Sbjct: 46 FRISLSLCSQALLWKIMIAPESPSMSHMHSKLPSMAFHLLWYLALVTQVSLCFLYALKCI 105
Query: 320 FFFEAVRREYYHPIRVNFFFAPWIACLFLTIGVPDSVAPTLLPHWLWYALMAPVLCLELK 379
FFF+ V+ E+ H I VN+ +AP I+ L + P ++L L++ PVL L++K
Sbjct: 106 FFFDKVKEEFLHYIGVNYLYAPSISWLLMLQSAPMMEPNSVLYQTLFWIFAVPVLTLDIK 165
Query: 380 IYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLREGPVFFFAVGMAHYSVLFV 439
+YGQW + +R LS +ANP++ +SV+ N V A A MG E + F++GM HY V+FV
Sbjct: 166 LYGQWFTTEKRFLSMLANPASQVSVIANLVAARGAAEMGWNECALCMFSLGMVHYLVIFV 225
Query: 440 TLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWARITGEFGLGSRVAYFIAMFLYASLA 499
TLYQRLP P +L P+FFLFVAAP++AS+AW I G F +++ +F+++F++ SL
Sbjct: 226 TLYQRLPGGNNFPAKLRPIFFLFVAAPAMASLAWNSICGTFDAVAKMLFFLSLFIFMSLV 285
Query: 500 VRINFFRGF--RFSLAWWAYTFPMTGAAIASIRYSTEVDN 537
R N F+ RF++AWWAY+FP+T A+ S++Y+ EV +
Sbjct: 286 CRPNLFKKSMKRFNVAWWAYSFPLTFLALDSVQYAQEVKD 325
>AT1G62262.1 | chr1:23000318-23001491 REVERSE LENGTH=366
Length = 365
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 168/278 (60%), Gaps = 10/278 (3%)
Query: 264 FGMCLGVSSQAILWKTIATSGPTAFLH--VTTKVNLVLWCVSVALMCAISATYGAKVVFF 321
F + L + SQA+LWK + LH + + +LW +++A ++ Y K +F
Sbjct: 46 FRISLSLCSQALLWKIMVH------LHSELPSMAYYLLWYLALATQVSLCFLYAFKCIFL 99
Query: 322 FEAVRREYYHPIRVNFFFAPWIACLFLTIGVPDSVAPTLLPHWLWYALMAPVLCLELKIY 381
F+ V+ E+ H I VN+ +AP I+CL L P ++L L++ PVL L+ K+Y
Sbjct: 100 FDMVKEEFSHYIGVNYLYAPSISCLLLLQSAPMIEPHSVLYQTLFWIFAVPVLTLDTKLY 159
Query: 382 GQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLREGPVFFFAVGMAHYSVLFVTL 441
GQW + +R LS +ANP++ +SV+ N V A A MG +E + F++GM HY V+FVTL
Sbjct: 160 GQWFTTEKRFLSIMANPASQVSVIANLVAARGAAEMGWKECALCLFSLGMVHYLVIFVTL 219
Query: 442 YQRLPTNETLPKELHPVFFLFVAAPSVASMAWARITGEFGLGSRVAYFIAMFLYASLAVR 501
YQRLP P L PVFFLF AAP+ AS+AW I G F +++ +F+++F++ SL R
Sbjct: 220 YQRLPGGNNFPTTLRPVFFLFFAAPATASLAWNSICGNFDTIAKMLFFLSLFIFISLVCR 279
Query: 502 INFFRGF--RFSLAWWAYTFPMTGAAIASIRYSTEVDN 537
N + RF++AWWAY+FP+T A+ S++Y+ EV +
Sbjct: 280 PNLLKKSIKRFNVAWWAYSFPITFLALNSVQYAQEVKD 317
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,334,894
Number of extensions: 499160
Number of successful extensions: 1092
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1080
Number of HSP's successfully gapped: 5
Length of query: 622
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 517
Effective length of database: 8,227,889
Effective search space: 4253818613
Effective search space used: 4253818613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 115 (48.9 bits)