BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0213500 Os05g0213500|AK065280
(209 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53160.2 | chr5:21561026-21561953 FORWARD LENGTH=189 274 2e-74
AT1G01360.1 | chr1:142138-142914 FORWARD LENGTH=188 270 4e-73
AT4G01026.1 | chr4:447180-448109 FORWARD LENGTH=212 259 7e-70
AT4G27920.1 | chr4:13901220-13901939 FORWARD LENGTH=184 256 6e-69
AT2G40330.1 | chr2:16845177-16845824 REVERSE LENGTH=216 177 4e-45
AT2G38310.1 | chr2:16050251-16050874 FORWARD LENGTH=208 174 3e-44
AT5G05440.1 | chr5:1609374-1609985 FORWARD LENGTH=204 168 2e-42
AT2G26040.1 | chr2:11094832-11095404 REVERSE LENGTH=191 161 2e-40
AT4G17870.1 | chr4:9928792-9929367 FORWARD LENGTH=192 151 3e-37
AT5G45860.1 | chr5:18604101-18604586 REVERSE LENGTH=162 137 3e-33
AT1G73000.1 | chr1:27463092-27463721 FORWARD LENGTH=210 137 6e-33
AT5G45870.1 | chr5:18606564-18607043 REVERSE LENGTH=160 136 7e-33
AT5G46790.1 | chr5:18984063-18984728 REVERSE LENGTH=222 132 9e-32
AT4G18620.1 | chr4:10254359-10254853 FORWARD LENGTH=165 125 2e-29
>AT5G53160.2 | chr5:21561026-21561953 FORWARD LENGTH=189
Length = 188
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 153/169 (90%), Gaps = 1/169 (0%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEI 95
E +RR H H ++QCSS LVKHI APVH+VWSLVR FDQPQ+YKPF+SRCVV+G ++EI
Sbjct: 17 EFIRRHHKHELVDNQCSSTLVKHINAPVHIVWSLVRRFDQPQKYKPFISRCVVKG-NMEI 75
Query: 96 GSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRP 155
G+VREV+VK+GLPAT STERLELLDD+EHILS++ VGGDHRL+NYSSI+++HPE+I+GR
Sbjct: 76 GTVREVDVKSGLPATRSTERLELLDDNEHILSIRIVGGDHRLKNYSSIISLHPETIEGRI 135
Query: 156 GTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQSPT 204
GTLVIESFVVDVP+GNTKDETCYFVEA+IKCNL SLA++SERLAVQ T
Sbjct: 136 GTLVIESFVVDVPEGNTKDETCYFVEALIKCNLKSLADISERLAVQDTT 184
>AT1G01360.1 | chr1:142138-142914 FORWARD LENGTH=188
Length = 187
Score = 270 bits (690), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/169 (76%), Positives = 149/169 (88%), Gaps = 1/169 (0%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEI 95
+++R H H E+QC+SALVKHIKAP+HLVWSLVR FDQPQ+YKPFVSRC V G D EI
Sbjct: 19 QYVRTHHQHLCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTVIG-DPEI 77
Query: 96 GSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRP 155
GS+REVNVK+GLPATTSTERLELLDD+EHIL +K +GGDHRL+NYSSI+TVHPE I+GR
Sbjct: 78 GSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYSSILTVHPEIIEGRA 137
Query: 156 GTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQSPT 204
GT+VIESFVVDVP GNTKDETCYFVEA+I+CNL SLA+VSERLA Q T
Sbjct: 138 GTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSERLASQDIT 186
>AT4G01026.1 | chr4:447180-448109 FORWARD LENGTH=212
Length = 211
Score = 259 bits (662), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 145/172 (84%), Gaps = 1/172 (0%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEI 95
+ +R H H E+QC+S LVK+I+APVHLVWSLVR FDQPQ+YKPF+SRC V GD EI
Sbjct: 21 QSLRLRHLHHCRENQCTSVLVKYIQAPVHLVWSLVRRFDQPQKYKPFISRCTV-NGDPEI 79
Query: 96 GSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRP 155
G +REVNVK+GLPATTSTERLE LDD+EHIL + +GGDHRL+NYSSI+TVHPE IDGR
Sbjct: 80 GCLREVNVKSGLPATTSTERLEQLDDEEHILGINIIGGDHRLKNYSSILTVHPEMIDGRS 139
Query: 156 GTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQSPTSPL 207
GT+V+ESFVVDVP GNTKD+TCYFVE++IKCNL SLA VSERLA Q T+ +
Sbjct: 140 GTMVMESFVVDVPQGNTKDDTCYFVESLIKCNLKSLACVSERLAAQDITNSI 191
>AT4G27920.1 | chr4:13901220-13901939 FORWARD LENGTH=184
Length = 183
Score = 256 bits (654), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 146/167 (87%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEI 95
E++++ H H E QCSS LVKHIKAP+HLVWS+VR FD+PQ+YKPF+SRCVV+G LE+
Sbjct: 12 EYIKKHHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVVQGKKLEV 71
Query: 96 GSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRP 155
GSVREV++K+GLPAT STE LE+LDD+EHIL ++ VGGDHRL+NYSS +++H E+IDG+
Sbjct: 72 GSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKT 131
Query: 156 GTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQS 202
GTL IESFVVDVP+GNTK+ETC+FVEA+I+CNL SLA+V+ERL +S
Sbjct: 132 GTLAIESFVVDVPEGNTKEETCFFVEALIQCNLNSLADVTERLQAES 178
>AT2G40330.1 | chr2:16845177-16845824 REVERSE LENGTH=216
Length = 215
Score = 177 bits (449), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 114/164 (69%), Gaps = 3/164 (1%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRC-VVRGGDLE 94
EH+ H+H G QC S +V+ ++APV VWS++ F+ PQ YK FV C VV G E
Sbjct: 46 EHVELSHTHVVGPSQCFSVVVQDVEAPVSTVWSILSRFEHPQAYKHFVKSCHVVIGDGRE 105
Query: 95 IGSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVH--PESID 152
+GSVREV V +GLPA S ERLE++DDD H++S VGGDHRL NY S+ TVH E D
Sbjct: 106 VGSVREVRVVSGLPAAFSLERLEIMDDDRHVISFSVVGGDHRLMNYKSVTTVHESEEDSD 165
Query: 153 GRPGTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSE 196
G+ T V+ES+VVDVP GN K+ETC F + +++CNL SLA+++E
Sbjct: 166 GKKRTRVVESYVVDVPAGNDKEETCSFADTIVRCNLQSLAKLAE 209
>AT2G38310.1 | chr2:16050251-16050874 FORWARD LENGTH=208
Length = 207
Score = 174 bits (440), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 123/164 (75%), Gaps = 4/164 (2%)
Query: 40 RLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLE-IGSV 98
R H+H G +QC SA+++ I AP+ VWS+VR FD PQ YK F+ C V GGD + +GS+
Sbjct: 41 RFHTHEVGPNQCCSAVIQEISAPISTVWSVVRRFDNPQAYKHFLKSCSVIGGDGDNVGSL 100
Query: 99 REVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRPGTL 158
R+V+V +GLPA +STERL++LDD+ H++S VGGDHRL NY S+ T+HP I GT+
Sbjct: 101 RQVHVVSGLPAASSTERLDILDDERHVISFSVVGGDHRLSNYRSVTTLHPSPIS---GTV 157
Query: 159 VIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQS 202
V+ES+VVDVP GNTK+ETC FV+ +++CNL SLA+++E A +S
Sbjct: 158 VVESYVVDVPPGNTKEETCDFVDVIVRCNLQSLAKIAENTAAES 201
>AT5G05440.1 | chr5:1609374-1609985 FORWARD LENGTH=204
Length = 203
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 116/163 (71%), Gaps = 4/163 (2%)
Query: 36 EHMRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRC-VVRGGDLE 94
EH+ H+H G QC S++V+ I AP VW+LVR FD P+ YK F+ +C +V+G L
Sbjct: 43 EHVAMHHTHDVGPDQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLH 102
Query: 95 IGSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGR 154
+G +REV V +GLPA +STERLE+LD++ H++S VGGDHRL+NY S+ T+H +
Sbjct: 103 VGDLREVMVVSGLPAVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDDE-- 160
Query: 155 PGTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSER 197
GT+V+ES++VDVP GNT++ET FV+ +++CNL SLA + R
Sbjct: 161 -GTVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQSLARSTNR 202
>AT2G26040.1 | chr2:11094832-11095404 REVERSE LENGTH=191
Length = 190
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 115/172 (66%), Gaps = 9/172 (5%)
Query: 38 MRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEIGS 97
++ H P C+S + + I AP +VW L+R FD P+RYK FV RC + GD ++GS
Sbjct: 22 IKTYHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGDGDVGS 81
Query: 98 VREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHP--ESIDGRP 155
VREV V +GLPA+TSTERLE +DDD +LS + VGG+HRL+NY S+ +V+ G+
Sbjct: 82 VREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKV 141
Query: 156 GTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQSPTSPL 207
T+V+ES+ VD+P+GNT+++T FV+ V+K NL ++L V + ++P+
Sbjct: 142 YTVVLESYTVDIPEGNTEEDTKMFVDTVVKLNL-------QKLGVAATSAPM 186
>AT4G17870.1 | chr4:9928792-9929367 FORWARD LENGTH=192
Length = 191
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Query: 41 LHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVV-RGGDLEIGSVR 99
H++ CSS + I AP LVWS+VR FD+PQ YK F+ C V + ++ +G R
Sbjct: 20 FHTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTR 79
Query: 100 EVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRPGTLV 159
+V V +GLPA TSTERL++LDD+ + +GG+HRL NY S+ TVH + R T+V
Sbjct: 80 DVIVISGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRFEKENRIWTVV 139
Query: 160 IESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERLAVQS 202
+ES+VVD+P+GN++D+T F + V+K NL LA V+E +A S
Sbjct: 140 LESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMARNS 182
>AT5G45860.1 | chr5:18604101-18604586 REVERSE LENGTH=162
Length = 161
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 49 HQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEIGSVREVNVKTGLP 108
H C S LV+ I AP+ LVWS++R FD PQ YK FV C + GD GSVREV V +GLP
Sbjct: 8 HTCGSTLVQTIDAPLSLVWSILRRFDNPQAYKQFVKTCNLSSGDGGEGSVREVTVVSGLP 67
Query: 109 ATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRPGTLVIESFVVDVP 168
A S ERL+ LDD+ H++ + +GGDHRL NY S T+ + D T+V+ES+VVDVP
Sbjct: 68 AEFSRERLDELDDESHVMMISIIGGDHRLVNYRS-KTMAFVAADTEEKTVVVESYVVDVP 126
Query: 169 DGNTKDETCYFVEAVIKCNLTSLAEVSERLA 199
+GN+++ET F + ++ NL SLA++SER+A
Sbjct: 127 EGNSEEETTSFADTIVGFNLKSLAKLSERVA 157
>AT1G73000.1 | chr1:27463092-27463721 FORWARD LENGTH=210
Length = 209
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 108/168 (64%), Gaps = 10/168 (5%)
Query: 38 MRRLHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGG-----D 92
+R H+ + C+S + + AP H +W VR F P +YK F+ C +R +
Sbjct: 37 IRTHHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKE 96
Query: 93 LEIGSVREVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESI- 151
+++G++REV+V +GLPA+TS E LE+LD+++ ILS + +GG+HRL NY S+ +V+ +
Sbjct: 97 IKVGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVL 156
Query: 152 ----DGRPGTLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVS 195
R ++V+ES++VD+P GNT+++T FV+ V+K NL +LA +S
Sbjct: 157 EKDKKKRVYSVVLESYIVDIPQGNTEEDTRMFVDTVVKSNLQNLAVIS 204
>AT5G45870.1 | chr5:18606564-18607043 REVERSE LENGTH=160
Length = 159
Score = 136 bits (343), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
Query: 48 EHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEIGSVREVNVKTGL 107
+H C S +V+ I AP+ LVWS++R FD P+ +K FV C +R GD GSVREV V + L
Sbjct: 7 QHVCGSTVVQTINAPLPLVWSILRRFDNPKTFKHFVKTCKLRSGDGGEGSVREVTVVSDL 66
Query: 108 PATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRPGTLVIESFVVDV 167
PA+ S ERL+ LDD+ H++ + +GGDHRL NY S TV + + + T+V+ES+VVDV
Sbjct: 67 PASFSLERLDELDDESHVMVISIIGGDHRLVNYQSKTTVFVAAEEEK--TVVVESYVVDV 124
Query: 168 PDGNTKDETCYFVEAVIKCNLTSLAEVSERL 198
P+GNT++ET F + ++ CNL SLA++SE++
Sbjct: 125 PEGNTEEETTLFADTIVGCNLRSLAKLSEKM 155
>AT5G46790.1 | chr5:18984063-18984728 REVERSE LENGTH=222
Length = 221
Score = 132 bits (333), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 106/162 (65%), Gaps = 4/162 (2%)
Query: 41 LHSHAPGEHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRC-VVRGGDLEIGSVR 99
H++ G +CSS L + I AP VWS+VR FD+PQ YK F+ C V ++ +G R
Sbjct: 47 FHTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTR 106
Query: 100 EVNVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVH---PESIDGRPG 156
+VNV +GLPA TS ERL+LLDDD + GG+HRLRNY S+ TVH E + R
Sbjct: 107 DVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIW 166
Query: 157 TLVIESFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERL 198
T+V+ES+VVDVP+GN++++T F + VI+ NL LA ++E +
Sbjct: 167 TVVLESYVVDVPEGNSEEDTRLFADTVIRLNLQKLASITEAM 208
>AT4G18620.1 | chr4:10254359-10254853 FORWARD LENGTH=165
Length = 164
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 48 EHQCSSALVKHIKAPVHLVWSLVRSFDQPQRYKPFVSRCVVRGGDLEIG------SVREV 101
+ +C S++V+ I+AP+ LVWS++RSFD+PQ Y+ FV C +R G SVR+V
Sbjct: 6 QKRCRSSVVETIEAPLPLVWSILRSFDKPQAYQRFVKSCTMRSGGGGGKGGEGKGSVRDV 65
Query: 102 NVKTGLPATTSTERLELLDDDEHILSVKFVGGDHRLRNYSSIVTVHPESIDGRPGTLVIE 161
+ +G PA STERLE LDD+ H++ V +GG+HRL NY S V D T+V+E
Sbjct: 66 TLVSGFPADFSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKVVASPEDMAKKTVVVE 125
Query: 162 SFVVDVPDGNTKDETCYFVEAVIKCNLTSLAEVSERL 198
S+VVDVP+G ++++T +FV+ +I+ NLTSLA++++++
Sbjct: 126 SYVVDVPEGTSEEDTIFFVDNIIRYNLTSLAKLTKKM 162
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,950,381
Number of extensions: 157253
Number of successful extensions: 362
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 344
Number of HSP's successfully gapped: 14
Length of query: 209
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 115
Effective length of database: 8,529,465
Effective search space: 980888475
Effective search space used: 980888475
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)