BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0195700 Os05g0195700|AK065594
(287 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366 150 7e-37
AT5G56840.1 | chr5:22980789-22982152 FORWARD LENGTH=234 150 8e-37
AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388 136 1e-32
AT1G70000.1 | chr1:26363674-26364635 REVERSE LENGTH=262 135 3e-32
AT5G61620.1 | chr5:24772383-24773507 FORWARD LENGTH=318 132 2e-31
AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315 125 3e-29
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 121 5e-28
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 117 8e-27
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 117 9e-27
AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216 113 1e-25
AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268 112 2e-25
AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264 112 3e-25
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 109 2e-24
AT1G19000.1 | chr1:6561335-6562684 REVERSE LENGTH=286 103 1e-22
AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288 100 1e-21
AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266 100 2e-21
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 99 3e-21
AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201 94 7e-20
AT3G10590.1 | chr3:3310424-3311311 REVERSE LENGTH=207 78 7e-15
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 52 3e-07
AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373 50 2e-06
AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337 50 2e-06
>AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366
Length = 365
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 108/191 (56%), Gaps = 33/191 (17%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
M R+CS C +NGHNSRTC + V +LFGV+L G
Sbjct: 1 MTRRCSHCNHNGHNSRTCPNRGV------------------------KLFGVRLTEGS-- 34
Query: 61 SPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLSDGLMG---RVQ 117
++K SM + ++ +GY S+ + +
Sbjct: 35 --IRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHV--AGDGYASEDFVAGSSSSR 90
Query: 118 ERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQ 177
ERKKG PWTEEEH+MFL GL KLGKGDWRGISR++VTTRTPTQVASHAQKYF+RQ+++++
Sbjct: 91 ERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSR 150
Query: 178 KKRRSSLFDVV 188
+KRRSSLFD+V
Sbjct: 151 RKRRSSLFDMV 161
>AT5G56840.1 | chr5:22980789-22982152 FORWARD LENGTH=234
Length = 233
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 105/202 (51%), Gaps = 55/202 (27%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGG- 59
M R+CS CGN GHNSRTCS + +RLFGV L
Sbjct: 1 MGRRCSHCGNVGHNSRTCSSYQT---------------------RVVRLFGVHLDTTSSS 39
Query: 60 ----------SSPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLS 109
++ +KK SM+C GYLS
Sbjct: 40 PPPPPPPSILAAAIKKSFSMDCLPACSSSSSSFA----------------------GYLS 77
Query: 110 DGLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYF 169
DGL + +RKKGVPWT EEH+ FL GL+KLGKGDWRGISR+FV T++PTQVASHAQKYF
Sbjct: 78 DGLAHKTPDRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYF 137
Query: 170 LRQ-NSMTQKKRRSSLFDVVEG 190
LRQ ++ K+RR+SLFD+V
Sbjct: 138 LRQTTTLHHKRRRTSLFDMVSA 159
>AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388
Length = 387
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 108/205 (52%), Gaps = 20/205 (9%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
M R+CS C NNGHNSRTC + ++LFGV+L G
Sbjct: 1 MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDG--- 57
Query: 61 SPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTE------RVSN-----GYLS 109
S +KK SM N R SN GYLS
Sbjct: 58 SIIKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLS 117
Query: 110 D------GLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVAS 163
D G R ERK+GVPWTEEEH++FL GL KLGKGDWRGISR++VT+RTPTQVAS
Sbjct: 118 DDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVAS 177
Query: 164 HAQKYFLRQNSMTQKKRRSSLFDVV 188
HAQKYF+R S +++KRRSSLFD+V
Sbjct: 178 HAQKYFIRHTSSSRRKRRSSLFDMV 202
>AT1G70000.1 | chr1:26363674-26364635 REVERSE LENGTH=262
Length = 261
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 103/191 (53%), Gaps = 31/191 (16%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
M+R CS CGNNGHNSRTC + LFGV++ S
Sbjct: 1 MSRSCSQCGNNGHNSRTCP---------TDITTTGDNNDKGGGEKAIMLFGVRV-TEASS 50
Query: 61 SPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLSDGLM---GRVQ 117
S +K +SM + GY SD ++ GR +
Sbjct: 51 SCFRKSVSMN------------------NLSQFDQTPDPNPTDDGGYASDDVVHASGRNR 92
Query: 118 ERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQ 177
ERK+G PWTEEEH++FL GL K+GKGDWRGISR+FV TRTPTQVASHAQKYFLR+ + +
Sbjct: 93 ERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNR 152
Query: 178 KKRRSSLFDVV 188
++RRSSLFD+
Sbjct: 153 RRRRSSLFDIT 163
>AT5G61620.1 | chr5:24772383-24773507 FORWARD LENGTH=318
Length = 317
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 99/191 (51%), Gaps = 30/191 (15%)
Query: 1 MARKCSSCGNNGHNSRTCSGQRVLDHSIXXXXXXXXXXXXXXXXXXLRLFGVQLQVGGGS 60
+A+ CS CG+NGHN+RTC ++LFGV +
Sbjct: 8 VAKTCSHCGHNGHNARTC--------------------LNGVNKASVKLFGVNISSDPIR 47
Query: 61 SP----LKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNGYLSDGLMGRV 116
P L+K LS+ ++T S+G +
Sbjct: 48 PPEVTALRKSLSLGNLDALLANDESNGSGDPIAAV------DDTGYHSDGQIHSKKGKTA 101
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
E+KKG PWTEEEH+ FL GL+KLGKGDWRGI++ FV+TRTPTQVASHAQKYF+R N
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVND 161
Query: 177 QKKRRSSLFDV 187
++KRR+SLFD+
Sbjct: 162 KRKRRASLFDI 172
>AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315
Length = 314
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QER+KG+PWTEEEH++FL GLDK GKGDWR ISR+FV +RTPTQVASHAQKYF+R NSM
Sbjct: 128 QERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN 187
Query: 177 QKKRRSSLFDVVEGIKRAAAMPISGSASELQI 208
+ +RRSS+ D+ +A A ++G + Q+
Sbjct: 188 RDRRRSSIHDITTVNNQAPA--VTGGGQQPQV 217
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 62/72 (86%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
QER+KG+ WTE+EH++FL GLDK GKGDWR ISR+FV TRTPTQVASHAQKYF+R NSM
Sbjct: 112 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN 171
Query: 177 QKKRRSSLFDVV 188
+ +RRSS+ D+
Sbjct: 172 KDRRRSSIHDIT 183
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 60/71 (84%)
Query: 118 ERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQ 177
ERKKGVPWTEEEH++FL GL K GKGDWR ISR+FV TRTPTQVASHAQKYF+RQ S +
Sbjct: 136 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 195
Query: 178 KKRRSSLFDVV 188
KRR+S+ D+
Sbjct: 196 DKRRASIHDIT 206
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
ERKKGVPWTEEEH+ FL GL K GKGDWR I+R+FVTTRTPTQVASHAQKYF+RQ +
Sbjct: 135 HERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGG 194
Query: 177 QKKRRSSLFDVV 188
+ KRRSS+ D+
Sbjct: 195 KDKRRSSIHDIT 206
>AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216
Length = 215
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 118 ERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQ 177
ERK+G PWTE EH++FL GL + GKGDWR ISR+ V TRTPTQVASHAQKYFLRQNS+ +
Sbjct: 94 ERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKK 153
Query: 178 KKRRSSLFDVVEGIKRAAAMP 198
+++RSS+ D+ + AMP
Sbjct: 154 ERKRSSIHDITT-VDATLAMP 173
>AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268
Length = 267
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 59/72 (81%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
+ERKKGVPWTE+EH FL GL K GKGDWR I++ FVTTRTPTQVASHAQKYFLRQ +
Sbjct: 140 KERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDG 199
Query: 177 QKKRRSSLFDVV 188
+ KRRSS+ D+
Sbjct: 200 KDKRRSSIHDIT 211
>AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264
Length = 263
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 61/80 (76%)
Query: 111 GLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFL 170
G G Q+RKKGVPWTEEEH+ FL GL K GKGDWR ISR+FV ++TPTQVASHAQKY+
Sbjct: 115 GARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQ 174
Query: 171 RQNSMTQKKRRSSLFDVVEG 190
RQ S + KRR S+ D+ G
Sbjct: 175 RQLSGAKDKRRPSIHDITTG 194
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 62/81 (76%)
Query: 108 LSDGLMGRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQK 167
L +G G Q+R+KGVPWTEEEH+ FL GL K GKGDWR ISR+FV ++TPTQVASHAQK
Sbjct: 116 LPNGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQK 175
Query: 168 YFLRQNSMTQKKRRSSLFDVV 188
Y+ RQ S + KRR S+ D+
Sbjct: 176 YYQRQLSGAKDKRRPSIHDIT 196
>AT1G19000.1 | chr1:6561335-6562684 REVERSE LENGTH=286
Length = 285
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 47 LRLFGVQLQVGGGSSPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEEN----TER 102
+ LFGV++ V P++KC+S+ ++N T
Sbjct: 22 IMLFGVRVVV----DPMRKCVSLNNLSDYEKSSPEDEIPKIVTAGAGDGEDKNETDATVI 77
Query: 103 VSNGYLSDGLMGRVQE----RKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTP 158
V++GY S ++ RK+GVPWTE EH+ FL GL K+GKGDW+GISR+FV +RTP
Sbjct: 78 VADGYASANDAVQISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTP 137
Query: 159 TQVASHAQKYFLRQNSMTQKKRRSSLFDVVEGIKRAAAMPISGSASELQIPGMSIGVG 216
TQVASHAQKYFLR+ ++ +++RRSSLFD+ AM + +P +I G
Sbjct: 138 TQVASHAQKYFLRRTNLNRRRRRSSLFDITTETVTEMAMEQDPTQENSPLPETNISSG 195
>AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
Query: 119 RKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQK 178
+KKG+PW+ EEH++FL GL+K GKGDW+ ISR VT+R+P QVASHAQKYFLRQ + +K
Sbjct: 91 KKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKN--KK 148
Query: 179 KRRSSLFDVVEGIKRAAAMPISGSASELQIP 209
+R S+ D+ G +P+S S Q P
Sbjct: 149 GKRFSIHDMTLGDAENVTVPVSNLNSMGQQP 179
>AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266
Length = 265
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 93/149 (62%), Gaps = 18/149 (12%)
Query: 47 LRLFGVQLQVGGGSSPLKKCLSMECXXXXXXXXXXXXXXXXXXXXXXXXIEENTERVSNG 106
+ LFGV++ + P++KC+S+ E++ + G
Sbjct: 24 IMLFGVRVVL----DPMRKCVSLNNLSDYEQTAETPKIDGEDRD------EQDMNKTPAG 73
Query: 107 YLS-DGLM------GRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPT 159
Y S D + G++ ERK+GVPWTEEEH++FL GL ++GKGDW+GISR+FV TRT T
Sbjct: 74 YASADEALPMSSSNGKI-ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTST 132
Query: 160 QVASHAQKYFLRQNSMTQKKRRSSLFDVV 188
QVASHAQKYFLR++++ +++RRSSLFD+
Sbjct: 133 QVASHAQKYFLRRSNLNRRRRRSSLFDMT 161
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 117 QERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
Q+R++GVPW EH+ FL GL K GKGDWR ISRH V TRT TQVASHAQKYF NS
Sbjct: 114 QKRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSED 173
Query: 177 QKKRRSSLFDVV 188
+K++R S+ D+
Sbjct: 174 KKRKRPSIHDIT 185
>AT4G09450.1 | chr4:5983277-5984500 FORWARD LENGTH=201
Length = 200
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 119 RKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMTQK 178
+K G+PW+EEE ++FL GL+K GKGDW+ ISR+ V +RT TQVASHAQKYF RQ +
Sbjct: 87 KKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTN 146
Query: 179 KRRSSLFDVVEGIKRAAAMPISGSASELQIP 209
+R S+ D+ G+ A +P S S Q P
Sbjct: 147 TKRPSIHDMTLGV--AVNVPGSNLESTGQQP 175
>AT3G10590.1 | chr3:3310424-3311311 REVERSE LENGTH=207
Length = 206
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 119 RKKGVP--WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQNSMT 176
RKK P WTEEEH++FL GL K G+G S +FV T+TP QV+SHAQ Y+ RQ S
Sbjct: 105 RKKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDN 163
Query: 177 QKKRRSSLFDVVEGIKRAAAMPISGSASELQIPGMSIGVGV 217
+K++R S+FD+ ++ P SG+ + S G G
Sbjct: 164 KKEKRRSIFDIT--LESTEGNPDSGNQNPPDDDDPSQGQGT 202
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 125 WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLR 171
WTEEEH FL L +L DW+ I FV ++T Q+ SHAQKYFL+
Sbjct: 46 WTEEEHDKFLEAL-QLFDRDWKKI-EDFVGSKTVIQIRSHAQKYFLK 90
>AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 125 WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYF 169
W+EEEH FL + G+G WR I H + T+T Q+ SHAQK+F
Sbjct: 79 WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFF 121
>AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 125 WTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLR 171
W+EEEH FL + G+G WR I H + T+T Q+ SHAQK+F +
Sbjct: 68 WSEEEHDRFLEAIKLYGRG-WRQIQEH-IGTKTAVQIRSHAQKFFSK 112
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,000,321
Number of extensions: 156197
Number of successful extensions: 676
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 683
Number of HSP's successfully gapped: 22
Length of query: 287
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 189
Effective length of database: 8,419,801
Effective search space: 1591342389
Effective search space used: 1591342389
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)