BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0189900 Os05g0189900|AK061489
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261 207 6e-54
AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258 202 1e-52
AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256 199 1e-51
AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257 193 7e-50
AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271 179 1e-45
AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266 178 2e-45
AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252 165 2e-41
AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272 145 2e-35
AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273 134 3e-32
AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284 58 5e-09
>AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261
Length = 260
Score = 207 bits (526), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 142/213 (66%), Gaps = 1/213 (0%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
+C S R A E +N+ WKT+PA+CA YV DY+ G+ Y D + V EA YA S + +G
Sbjct: 47 HCTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFESNGD 106
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
GK++W+FD+DET LS +PY +HG G++ +DH+ F +V G APA+ +L+LYQ+++ L
Sbjct: 107 GKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHL 166
Query: 158 GIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQTSTQA-FKTSERKKLVDAG 216
G K + LT R E+ IT NL + G+ +W+KL+L+ + + T +K+ +R+++V G
Sbjct: 167 GYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKEG 226
Query: 217 YVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
Y I GN GDQWSD+L S R+FK P+PMYY+
Sbjct: 227 YRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYI 259
>AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258
Length = 257
Score = 202 bits (514), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 138/213 (64%), Gaps = 1/213 (0%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
+C + R A E +N+ WKT+P +CA YV DY+ G Y D + V EA+ +A S++ SG
Sbjct: 44 HCTTWRFAAEMNNLAPWKTIPVECADYVKDYVMGKGYLTDLERVSEEALIFARSIEFSGD 103
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
GK++W+FD+DET LS +PY HG+G++ +DH+ F ++V G APA+ +L+LYQR+L L
Sbjct: 104 GKDIWIFDIDETLLSNLPYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLDL 163
Query: 158 GIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQ-PIGLQTSTQAFKTSERKKLVDAG 216
G K LT R E +T NL++ G+ +W+KL+L+ P +K+ +R ++V G
Sbjct: 164 GYKVFLLTGRKESHRLVTVENLINAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVKEG 223
Query: 217 YVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
Y I GN GDQWSD+L + R+FK +PMYY+
Sbjct: 224 YRIRGNSGDQWSDLLGTSMSQRSFKLANPMYYI 256
>AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256
Length = 255
Score = 199 bits (506), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
YC S R A E +N+ W +P+ C VA+Y+ GD++ D V+++ A+A+A+S+++SG
Sbjct: 42 YCDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYSVIVDYALAFAKSVEISGD 101
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
GK+VW+FD+DET L+ + Y HGYG +PYD F ++V G+APA +LRLY L +L
Sbjct: 102 GKDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDASLRLYNALKKL 161
Query: 158 GIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQ-PIGLQTSTQAFKTSERKKLVDAG 216
G + LT R E Q T NL GYS WE+LLL+ P S +K+ +R KL++ G
Sbjct: 162 GFTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPNDQGKSATNYKSEQRSKLIEEG 221
Query: 217 YVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
+ I GN GDQWSD+ R+FK P+PMYY+
Sbjct: 222 FKIRGNSGDQWSDLQGFAVADRSFKVPNPMYYI 254
>AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257
Length = 256
Score = 193 bits (491), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 3/215 (1%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
YC S R A E +N+ WK +P+ C Y+ +YI G ++ +D DVV + A+ YA+++K+ G
Sbjct: 43 YCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVGGD 102
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
GK+ WVFD+DET LS + Y +GYG +PYD + + V G P +LRLY+ L +L
Sbjct: 103 GKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKKL 162
Query: 158 GIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQ--TSTQAFKTSERKKLVDA 215
G + LT R E ++T NL GY W +LLL+ Q T+TQ +K+ +R ++V
Sbjct: 163 GFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQ-YKSEQRSQVVKE 221
Query: 216 GYVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYVA 250
GY I GN GDQWSD+L R+FK P+PMYYVA
Sbjct: 222 GYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA 256
>AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271
Length = 270
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 39 CGSVRTAVEAHNIIGWKTLPADCAKYVADY-ITGDRYGRDSDVVINEAVAYAESLKLSGS 97
C S VE NII + T+PA+C YV DY IT +Y DS V EA YA+ L L
Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKND 116
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQ---PYDHANFLQYVAGGSAPALQGTLRLYQRL 154
VW+FD+D+T LS++PY AK+GYG + P + ++L+ +G S P L TL LY+ L
Sbjct: 117 TVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLE--SGESTPGLPETLHLYENL 174
Query: 155 LQLGIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQTSTQAFKTSERKKLVD 214
L+LGI+P+ ++DR + +T NL + G + W+ L+L+P G + + +K+ R LV
Sbjct: 175 LELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVK 234
Query: 215 AGYVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
GY I+GNIGDQW+D++ G R FK P+P+YYV
Sbjct: 235 KGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 268
>AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266
Length = 265
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Query: 39 CGSVRTAVEAHNIIGWKTLPADCAKYVADY-ITGDRYGRDSDVVINEAVAYAESLKLSGS 97
C S VE NII + T+PA+C YV DY IT +Y DS V EA YA+ L L
Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYV-AGGSAPALQGTLRLYQRLLQ 156
VW+FD+D+T LS++PY AK+GYG + D + ++ G S P L L LYQ +++
Sbjct: 112 TVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIE 171
Query: 157 LGIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQTSTQAFKTSERKKLVDAG 216
LGI+P+ L+DR + +T NL + G + W+ L+L+P G +K+ RK LV G
Sbjct: 172 LGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQVVYKSKVRKSLVKKG 231
Query: 217 YVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
Y I+GNIGDQW+D++ G R FK P+P+YYV
Sbjct: 232 YNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 263
>AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252
Length = 251
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
YC S R AVE +N+ W+ +P C +YV Y+ +Y RD + +++ Y + L G
Sbjct: 37 YCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEIILPGD 96
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
G + W+ DVD+T S V Y YG PYD F + G +PA+Q L L+ +L++
Sbjct: 97 GMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLIET 156
Query: 158 GIKPVFLTDRTEDQI-AITTHNLLSQGYSSWEKLLLQPI-GLQTSTQAFKTSERKKLVDA 215
G K +T R E+ + T NL +QG++ +E+L+++ + S +KT RK++++
Sbjct: 157 GFKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMRTADNKRQSATTYKTRIRKEMMEE 216
Query: 216 GYVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYV 249
GY I GN+GDQWSD+ G RTFK P+PMY+V
Sbjct: 217 GYRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYFV 250
>AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272
Length = 271
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
YC S R VE HNI + +P +C ++ DY+T +Y D ++E + + S+ S S
Sbjct: 54 YCESWRINVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVDEVILHFGSMCCSKS 113
Query: 98 ---GKEVWVFDVDETALSTVPYQAKHGY-GVQPYDHANFLQYVAGGSAPALQGTLRLYQR 153
G + W+FD+D+T LST+PY K+G+ G + + F ++ APA+ +LY
Sbjct: 114 KCDGMDAWIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKKKAPAVPHMKKLYHD 173
Query: 154 LLQLGIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPI-GLQTSTQAFKTSERKKL 212
+ + GIK ++ R E + T NL+ GY W L+L+ + Q + +K+ +RK L
Sbjct: 174 IRERGIKIFLISSRKEYLRSATVDNLIQAGYYGWSNLMLRGLEDQQKEVKQYKSEKRKWL 233
Query: 213 VDAGYVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYVA 250
+ GY + G +GDQWS P RTFK P+ +YYVA
Sbjct: 234 MSLGYRVWGVMGDQWSSFAGCPLPRRTFKLPNSIYYVA 271
>AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273
Length = 272
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESL---KL 94
YC S R VE +NI +K +P +C +V Y+T +Y D + ++EA+ Y K
Sbjct: 55 YCESWRVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVDEAILYLGKTCCEKK 114
Query: 95 SGSGKEVWVFDVDETALSTVPYQAKHG-YGVQPYDHANFLQYVAGGSAPALQGTLRLYQR 153
+ G + W+FD+D+T LST+PY +G +G + + F ++ G APA+ ++LY
Sbjct: 115 TCDGMDAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSGKAPAVPHMVKLYHE 174
Query: 154 LLQLGIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQ-PIGLQTSTQAFKTSERKKL 212
+ + G K ++ R E + T NL+ GY SW LLL+ + S +K R L
Sbjct: 175 IRERGFKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLRGEDDEKKSVSQYKADLRTWL 234
Query: 213 VDAGYVIIGNIGDQWSDILRSPEGCRTFKYPSPMYYVA 250
GY + G +G QW+ P RTFK P+ +YYVA
Sbjct: 235 TSLGYRVWGVMGAQWNSFSGCPVPKRTFKLPNSIYYVA 272
>AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284
Length = 283
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 38 YCGSVRTAVEAHNIIGWKTLPADCAKYVADYITGDRYGRDSDVVINEAVAYAESLKLSGS 97
YC + + +++ LP C I Y R+ + I A+ Y +++K
Sbjct: 87 YCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPMND 146
Query: 98 GKEVWVFDVDETALSTVPYQAKHGYGVQPYDHANFLQYVAGGSAPALQGTLRLYQRLLQL 157
+V V D+D+T L + Y +++Y+ L LY +L
Sbjct: 147 NCDVVVIDIDDTNL-----LEQDSY---------YMKYIEEAKHQKSILILALYSKLRSQ 192
Query: 158 GIKPVFLTDRTEDQIAITTHNLLSQGYSSWEKLLLQPIGLQTSTQAFKTSERKKLVDAGY 217
G V L+ R E + T L S+GYS W L++ + + + +K+ ++ G+
Sbjct: 193 GYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIM----------SREDTRQKEELERGH 242
Query: 218 VIIGNIGDQWSDILRSP---EGCRTFKYPSPMY 247
+IG IG+ D+LR + R FK PS Y
Sbjct: 243 RVIGVIGNHM-DVLRGQWNWQSKRLFKLPSLTY 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,934,622
Number of extensions: 192106
Number of successful extensions: 472
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 454
Number of HSP's successfully gapped: 10
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)