BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0189300 Os05g0189300|AK060874
(251 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258 207 5e-54
AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261 205 2e-53
AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256 201 2e-52
AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257 190 8e-49
AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271 175 3e-44
AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266 171 3e-43
AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252 165 2e-41
AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272 144 6e-35
AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273 142 2e-34
AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284 57 1e-08
>AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258
Length = 257
Score = 207 bits (526), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 138/213 (64%), Gaps = 1/213 (0%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
+C + R A E N+ WKT+P CA YV DY+ G+ Y D + V EA+ +A S++ SG
Sbjct: 44 HCTTWRFAAEMNNLAPWKTIPVECADYVKDYVMGKGYLTDLERVSEEALIFARSIEFSGD 103
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQL 158
GK+IW+FD+D+T LS +PY +HG+G++ FD+ F K+V +G APA+ +L+LY+R+L L
Sbjct: 104 GKDIWIFDIDETLLSNLPYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLDL 163
Query: 159 GIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQ-PVRLQTSTLAFKTCERQKLVNDG 217
G K LT R E R VT NLI G+ NW+KL+L+ P +K+ +R ++V +G
Sbjct: 164 GYKVFLLTGRKESHRLVTVENLINAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVKEG 223
Query: 218 YIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
Y I GN GDQW+D+ + R+FK NPMYY+
Sbjct: 224 YRIRGNSGDQWSDLLGTSMSQRSFKLANPMYYI 256
>AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261
Length = 260
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 142/214 (66%), Gaps = 3/214 (1%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
+C S R A E N+ WKT+P CA YV DY+ GE Y D + V EA YA S + +G
Sbjct: 47 HCTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFESNGD 106
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQL 158
GK+IW+FD+D+T LS +PY HG G++ FD+ F +V +G APA+ +L+LY++++ L
Sbjct: 107 GKDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHL 166
Query: 159 GIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPV--RLQTSTLAFKTCERQKLVND 216
G K + LT R E+ R +T NL G+ NW+KL+L+ + R +T+T+ +K+ +R+++V +
Sbjct: 167 GYKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATM-YKSEKREEMVKE 225
Query: 217 GYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
GY I GN GDQW+D+ S R+FK PNPMYY+
Sbjct: 226 GYRIRGNSGDQWSDLLGSAMSERSFKLPNPMYYI 259
>AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256
Length = 255
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 138/213 (64%), Gaps = 1/213 (0%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
YC S R A E N+ W +P C VA+Y+ G+++ D V+++ A+A+A+S+++SG
Sbjct: 42 YCDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYSVIVDYALAFAKSVEISGD 101
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQL 158
GK++W+FD+D+T L+ + Y HGYG +P+D+ F ++V QG+APA ++LRLY L +L
Sbjct: 102 GKDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDASLRLYNALKKL 161
Query: 159 GIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQ-PVRLQTSTLAFKTCERQKLVNDG 217
G + LT R E QRT T NL GY WE+L+L+ P S +K+ +R KL+ +G
Sbjct: 162 GFTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPNDQGKSATNYKSEQRSKLIEEG 221
Query: 218 YIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
+ I GN GDQW+D++ R+FK PNPMYY+
Sbjct: 222 FKIRGNSGDQWSDLQGFAVADRSFKVPNPMYYI 254
>AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257
Length = 256
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 1/214 (0%)
Query: 38 PYCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSG 97
YC S R A E N+ WK +P C Y+ +YI G ++ +D DVV + AI YA+++K+ G
Sbjct: 42 SYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVGG 101
Query: 98 TGKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQ 157
GK+ WVFD+D+T LS + Y +GYG +P+D+ + + V +G P ++LRLY+ L +
Sbjct: 102 DGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKK 161
Query: 158 LGIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLA-FKTCERQKLVND 216
LG + LT R E R+VT NL GY W +L+L+ Q T +K+ +R ++V +
Sbjct: 162 LGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQRSQVVKE 221
Query: 217 GYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
GY I GN GDQW+D+ R+FK PNPMYYV
Sbjct: 222 GYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYV 255
>AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271
Length = 270
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 38 PYCGSLRTAVEARNIIGWKTVPPPCAKYVADY-ITGERYGRDADVVINEAIAYAESLKLS 96
P C S VE NII + TVP C YV DY IT ++Y D+ V EA YA+ L L
Sbjct: 55 PNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALK 114
Query: 97 GTGKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQG-SAPALQSTLRLYRRL 155
+W+FD+DDT LS++PY A +GYG + ++ ++ G S P L TL LY L
Sbjct: 115 NDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENL 174
Query: 156 LQLGIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLAFKTCERQKLVN 215
L+LGI+P+ ++DR + VT NL G W+ L+L+P + + + +K+ R LV
Sbjct: 175 LELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVK 234
Query: 216 DGYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
GY IVGNIGDQW D+ G R FK PNP+YYV
Sbjct: 235 KGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 268
>AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266
Length = 265
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 40 CGSLRTAVEARNIIGWKTVPPPCAKYVADY-ITGERYGRDADVVINEAIAYAESLKLSGT 98
C S VE NII + TVP C YV DY IT ++Y D+ V EA YA+ L L
Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKND 111
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQG-SAPALQSTLRLYRRLLQ 157
+W+FD+DDT LS++PY A +GYG + D ++ ++ G S P L L LY+ +++
Sbjct: 112 TVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIE 171
Query: 158 LGIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLAFKTCERQKLVNDG 217
LGI+P+ L+DR + + VT +NL G W+ L+L+P + +K+ R+ LV G
Sbjct: 172 LGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQVVYKSKVRKSLVKKG 231
Query: 218 YIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
Y IVGNIGDQW D+ G R FK PNP+YYV
Sbjct: 232 YNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 263
>AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252
Length = 251
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
YC S R AVE N+ W+ VP C +YV Y+ +Y RD + +++ Y + L G
Sbjct: 37 YCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEIILPGD 96
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQL 158
G + W+ DVDDT S V Y YG P+D F + ++G +PA+Q L L+ +L++
Sbjct: 97 GMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLIET 156
Query: 159 GIKPVFLTDRTEDQ-RTVTTNNLIKQGYCNWEKLVLQPV-RLQTSTLAFKTCERQKLVND 216
G K +T R E+ R T NL QG+ +E+L+++ + S +KT R++++ +
Sbjct: 157 GFKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMRTADNKRQSATTYKTRIRKEMMEE 216
Query: 217 GYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
GY I GN+GDQW+D++ G RTFK PNPMY+V
Sbjct: 217 GYRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYFV 250
>AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272
Length = 271
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 121/217 (55%), Gaps = 5/217 (2%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
YC S R VE NI + VP C ++ DY+T +Y D ++E I + S+ S +
Sbjct: 54 YCESWRINVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVDEVILHFGSMCCSKS 113
Query: 99 ---GKEIWVFDVDDTALSTVPYQANHGY-GVQPFDNQSFLKYVVQGSAPALQSTLRLYRR 154
G + W+FD+DDT LST+PY +G+ G + ++ F ++ + APA+ +LY
Sbjct: 114 KCDGMDAWIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKKKAPAVPHMKKLYHD 173
Query: 155 LLQLGIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLA-FKTCERQKL 213
+ + GIK ++ R E R+ T +NLI+ GY W L+L+ + Q + +K+ +R+ L
Sbjct: 174 IRERGIKIFLISSRKEYLRSATVDNLIQAGYYGWSNLMLRGLEDQQKEVKQYKSEKRKWL 233
Query: 214 VNDGYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
++ GY + G +GDQW+ P RTFK PN +YYV
Sbjct: 234 MSLGYRVWGVMGDQWSSFAGCPLPRRTFKLPNSIYYV 270
>AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273
Length = 272
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 5/223 (2%)
Query: 33 APPPPPYCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAES 92
AP YC S R VE NI +K VP C +V Y+T +Y D + ++EAI Y
Sbjct: 49 APNLNGYCESWRVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVDEAILYLGK 108
Query: 93 L---KLSGTGKEIWVFDVDDTALSTVPYQANHG-YGVQPFDNQSFLKYVVQGSAPALQST 148
K + G + W+FD+DDT LST+PY ++G +G + + F ++ G APA+
Sbjct: 109 TCCEKKTCDGMDAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSGKAPAVPHM 168
Query: 149 LRLYRRLLQLGIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLA-FKT 207
++LY + + G K ++ R E R+ T NLI+ GY +W L+L+ + +++ +K
Sbjct: 169 VKLYHEIRERGFKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLRGEDDEKKSVSQYKA 228
Query: 208 CERQKLVNDGYIIVGNIGDQWNDIRRSPDGCRTFKFPNPMYYV 250
R L + GY + G +G QWN P RTFK PN +YYV
Sbjct: 229 DLRTWLTSLGYRVWGVMGAQWNSFSGCPVPKRTFKLPNSIYYV 271
>AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284
Length = 283
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 39 YCGSLRTAVEARNIIGWKTVPPPCAKYVADYITGERYGRDADVVINEAIAYAESLKLSGT 98
YC L + ++ +P C I Y R+ + I A+ Y +++K
Sbjct: 87 YCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPMND 146
Query: 99 GKEIWVFDVDDTALSTVPYQANHGYGVQPFDNQSFLKYVVQGSAPALQSTLRLYRRLLQL 158
++ V D+DDT L + ++KY+ + L LY +L
Sbjct: 147 NCDVVVIDIDDTNLLE--------------QDSYYMKYIEEAKHQKSILILALYSKLRSQ 192
Query: 159 GIKPVFLTDRTEDQRTVTTNNLIKQGYCNWEKLVLQPVRLQTSTLAFKTCERQKLVNDGY 218
G V L+ R E +R T L +GY +W L++ + T + ER G+
Sbjct: 193 GYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIMS----REDTRQKEELER------GH 242
Query: 219 IIVGNIGDQWNDIRRSPD--GCRTFKFPNPMY 248
++G IG+ + +R + R FK P+ Y
Sbjct: 243 RVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,739,539
Number of extensions: 239763
Number of successful extensions: 774
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 756
Number of HSP's successfully gapped: 10
Length of query: 251
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 155
Effective length of database: 8,474,633
Effective search space: 1313568115
Effective search space used: 1313568115
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)