BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0187100 Os05g0187100|AK067988
(374 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497 442 e-124
AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503 436 e-122
AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494 353 6e-98
AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503 324 5e-89
AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499 320 5e-88
AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494 226 1e-59
>AT4G29130.1 | chr4:14352338-14354865 REVERSE LENGTH=497
Length = 496
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/341 (62%), Positives = 264/341 (77%), Gaps = 1/341 (0%)
Query: 16 LREECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLG 75
E+CATP ++L V SK+KM++SYVDNLP+G E+GLFYALDLG
Sbjct: 44 FEEDCATPISKLRQVADAMTVEMHAGLASDGGSKLKMLISYVDNLPSGDEKGLFYALDLG 103
Query: 76 GTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVADEGHNAV 135
GTNFRV+RV L GK++RVVK+E EVSIPPHLM+G S ELF FIA ALAKFVA E +
Sbjct: 104 GTNFRVMRVLLGGKQERVVKQEFEEVSIPPHLMTGGSDELFNFIAEALAKFVATECEDFH 163
Query: 136 FND-RQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMR 194
+ RQRELGFTFSFPV+QTS++SG+LIKWTK FSI++AVG+DVV L A+E+ GLDMR
Sbjct: 164 LPEGRQRELGFTFSFPVKQTSLSSGSLIKWTKGFSIEEAVGQDVVGALNKALERVGLDMR 223
Query: 195 VSALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINT 254
++AL+NDTVGTLA G YY+ D+V VILGTG+NAAY+E+A AIPK G LPKSG MVIN
Sbjct: 224 IAALVNDTVGTLAGGRYYNPDVVAAVILGTGTNAAYVERATAIPKWHGLLPKSGEMVINM 283
Query: 255 EWGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGN 314
EWGNF SS LP+TE+D LD ESLNPGEQI EK+ISGMYLGEI+RRVLLK++ ++ FG+
Sbjct: 284 EWGNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAEDAAFFGD 343
Query: 315 LDQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLADNLKV 355
+KL+ FI+RTP +S MH+D +PDL+IV K+ D L+V
Sbjct: 344 TVPSKLRIPFIIRTPHMSAMHNDTSPDLKIVGSKIKDILEV 384
>AT2G19860.1 | chr2:8570818-8573762 FORWARD LENGTH=503
Length = 502
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/339 (63%), Positives = 258/339 (76%), Gaps = 1/339 (0%)
Query: 18 EECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLGGT 77
E+CATP A+L V SK+KM++SYVDNLP+G E G FYALDLGGT
Sbjct: 46 EDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDETGFFYALDLGGT 105
Query: 78 NFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVADEGHN-AVF 136
NFRV+RV L GK RVVKRE +E SIPPHLM+G S ELF FI LAKFVA EG + +
Sbjct: 106 NFRVMRVLLGGKHDRVVKREFKEESIPPHLMTGKSHELFDFIVDVLAKFVATEGEDFHLP 165
Query: 137 NDRQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMRVS 196
RQRELGFTFSFPV+Q S++SGTLI WTK FSIDD V +DVV EL AME+ GLDM V+
Sbjct: 166 PGRQRELGFTFSFPVKQLSLSSGTLINWTKGFSIDDTVDKDVVGELVKAMERVGLDMLVA 225
Query: 197 ALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINTEW 256
AL+NDT+GTLA G Y + D+VV VILGTG+NAAY+E+A+AIPK G LPKSG MVIN EW
Sbjct: 226 ALVNDTIGTLAGGRYTNPDVVVAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEW 285
Query: 257 GNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGNLD 316
GNF SS LP+TEYD +LD +SLNPGEQI EK+ISGMYLGEI+RRVLLK++ +++ FG++
Sbjct: 286 GNFRSSHLPLTEYDHSLDVDSLNPGEQILEKIISGMYLGEILRRVLLKMAEEAAFFGDIV 345
Query: 317 QTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLADNLKV 355
KLK FI+RTP++S MH D +PDL++V KL D L+V
Sbjct: 346 PPKLKIPFIIRTPNMSAMHSDTSPDLKVVGSKLKDILEV 384
>AT1G47840.1 | chr1:17616243-17618859 REVERSE LENGTH=494
Length = 493
Score = 353 bits (907), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 188/342 (54%), Positives = 228/342 (66%), Gaps = 4/342 (1%)
Query: 16 LREECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLG 75
+++CATP L V ++MI+++VD LP+G EEGLFYALDLG
Sbjct: 47 FQKDCATPTPYLRNVANAIADDMRDGLAVEGGGDLEMILTFVDALPSGNEEGLFYALDLG 106
Query: 76 GTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVADE--GHN 133
GTNFRV VQL GK++RV+ ES ++SI LM G S ELFGFIAS LA FVA E G
Sbjct: 107 GTNFRVRSVQLGGKKERVLATESEQISISQKLMIGTSEELFGFIASKLANFVAKEKPGRF 166
Query: 134 AVFNDRQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDM 193
+ R+RELGFTFSFPV+QTSI SGTL KWTK F + G++VVA L AME GLDM
Sbjct: 167 LLEEGRKRELGFTFSFPVKQTSIDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEAHGLDM 226
Query: 194 RVSALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVIN 253
RVSAL+ND VGTLA Y+DED++VGVILGTG+NA Y+E+ +AIPKL + SG +IN
Sbjct: 227 RVSALVNDGVGTLAGARYWDEDVMVGVILGTGTNACYVEQKHAIPKLRSK-SSSGTTIIN 285
Query: 254 TEWGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFG 313
TEWG F S LP T +D +D+ SLNPGE ++EK+ISGMYLGEIVRRVLL + S +FG
Sbjct: 286 TEWGGF-SKILPQTIFDLEMDETSLNPGEHLYEKMISGMYLGEIVRRVLLHMCETSDLFG 344
Query: 314 NLDQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLADNLKV 355
+ KL T LRT + M D T DLR V L D L V
Sbjct: 345 HFAPAKLSTPLALRTEHLCKMQEDNTDDLRDVGSILYDFLDV 386
>AT3G20040.1 | chr3:6995317-6998064 FORWARD LENGTH=503
Length = 502
Score = 324 bits (830), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/337 (48%), Positives = 223/337 (66%), Gaps = 2/337 (0%)
Query: 16 LREECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLG 75
L E C TP RL + SK+KM++++VD+LPNG+E G +YAL LG
Sbjct: 44 LEEACETPLGRLRQMVDAIAVEMQAGLVSEGGSKLKMLLTFVDDLPNGSETGTYYALHLG 103
Query: 76 GTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVADEGHN-A 134
G+ FR+++V L G+ + ++ SIP LM+ S LF F+AS+L +F+ EG++ +
Sbjct: 104 GSYFRIIKVHLGGQRSSLEVQDVERHSIPTSLMNSTSEVLFDFLASSLQRFIEKEGNDFS 163
Query: 135 VFNDRQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMR 194
+ +REL FTFSFPV+QTSI+SG LIKWTK F+I + GED+ LQ A+ K+GLD+R
Sbjct: 164 LSQPLKRELAFTFSFPVKQTSISSGVLIKWTKGFAISEMAGEDIAECLQGALNKRGLDIR 223
Query: 195 VSALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINT 254
V+AL+NDTVG L+ G ++D D + V+ GTGSNA YLE+ +AI K + SG+MV+N
Sbjct: 224 VAALVNDTVGALSFGHFHDPDTIAAVVFGTGSNACYLERTDAIIKCQNPRTTSGSMVVNM 283
Query: 255 EWGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGN 314
EWGNF SS LP T YD LD ES+N + FEK+I GMYLG+IVRRV+L++S +S IFG
Sbjct: 284 EWGNFWSSRLPRTSYDLELDAESMNSNDMGFEKMIGGMYLGDIVRRVILRMSQESDIFGP 343
Query: 315 LDQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLAD 351
+ L T F+LRT +S MH D T +L+ VA L D
Sbjct: 344 ISSI-LSTPFVLRTNSVSAMHEDDTSELQEVARILKD 379
>AT1G50460.1 | chr1:18694031-18697429 FORWARD LENGTH=499
Length = 498
Score = 320 bits (821), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/336 (48%), Positives = 218/336 (64%), Gaps = 1/336 (0%)
Query: 16 LREECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLG 75
L ++C TP RL V SK+KM++++VD+LP G E+G +YAL LG
Sbjct: 44 LEDDCDTPVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTFVDDLPTGREKGTYYALHLG 103
Query: 76 GTNFRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVADEGHNAV 135
GT FR+LRV L + + ++ IP HLM+ S LF F+A +L +F+ E + +
Sbjct: 104 GTYFRILRVLLGDQRSYLDVQDVERHPIPSHLMNSTSEVLFNFLAFSLERFIEKEENGSD 163
Query: 136 FNDRQRELGFTFSFPVRQTSIASGTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMRV 195
+REL FTFSFPV+ TSI+SG LIKWTK F I + VG+D+ LQ A+ ++GLDM V
Sbjct: 164 SQGVRRELAFTFSFPVKHTSISSGVLIKWTKGFEISEMVGQDIAECLQGALNRRGLDMHV 223
Query: 196 SALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINTE 255
+AL+NDTVG L+ G Y+D D VV V+ GTGSNA YLE+ +AI K +G L SG+MV+N E
Sbjct: 224 AALVNDTVGALSLGYYHDPDTVVAVVFGTGSNACYLERTDAIIKCQGLLTTSGSMVVNME 283
Query: 256 WGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGNL 315
WGNF SS LP T YD LD ES N + FEK+ISGMYLG+IVRRV+L++S S IFG +
Sbjct: 284 WGNFWSSHLPRTSYDIDLDAESSNANDMGFEKMISGMYLGDIVRRVILRMSEDSDIFGPI 343
Query: 316 DQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLAD 351
L ++LRT +S +H D TP+L+ VA L D
Sbjct: 344 SPV-LSEPYVLRTNSVSAIHEDDTPELQEVARILKD 378
>AT4G37840.1 | chr4:17790147-17792198 REVERSE LENGTH=494
Length = 493
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 204/336 (60%), Gaps = 6/336 (1%)
Query: 19 ECATPAARLDGVXXXXXXXXXXXXXXXXXSKIKMIVSYVDNLPNGTEEGLFYALDLGGTN 78
ECATP ++L V + M+VS+ +LP+G E+G+ Y ++L G
Sbjct: 48 ECATPVSKLWAVADALVADMTASLTAECCGSLNMLVSFTGSLPSGDEKGVHYGVNLRGKE 107
Query: 79 FRVLRVQLAGKEKRVVKRESREVSIPPHLMSGNSSELFGFIASALAKFVA-DEGHNAVFN 137
+LR L G E+ + + E+ IP +++G+ EL FI+ L KF+A + G A
Sbjct: 108 LLLLRGTLGGNEEPISDVQKHEIPIPDDVLNGSFKELCDFISLELVKFLAMNPGGEA--- 164
Query: 138 DRQRELGFTFSFPVRQTSIAS-GTLIKWTKAFSIDDAVGEDVVAELQMAMEKQGLDMRV- 195
+ + LGFT + V Q S ++ + + A D+ V +D+V ++ ++E GL +R+
Sbjct: 165 EEVKNLGFTLTRSVEQIGSHSISSIHRKSLANDDDEKVLKDLVNDMNESLETHGLKIRMN 224
Query: 196 SALINDTVGTLAAGSYYDEDIVVGVILGTGSNAAYLEKANAIPKLEGELPKSGNMVINTE 255
+AL+++T+G LA G YY +D V V LG G+NAAY+E+A I + + + + +V++TE
Sbjct: 225 TALVDNTIGELAGGRYYHKDTVAAVSLGMGTNAAYIEQAQEISRWKSAIREPQEIVVSTE 284
Query: 256 WGNFSSSCLPITEYDEALDKESLNPGEQIFEKLISGMYLGEIVRRVLLKISLQSSIFGNL 315
WG+F S LPITE+D +LD ESLNPG +IFEK++SG YLGEIVRRVLLK+S +S++FG+
Sbjct: 285 WGDFRSCHLPITEFDASLDAESLNPGHRIFEKMVSGRYLGEIVRRVLLKMSEESALFGDT 344
Query: 316 DQTKLKTRFILRTPDISVMHHDGTPDLRIVAEKLAD 351
KL +IL +PD++ MH D + + V +KL +
Sbjct: 345 LPPKLTIPYILWSPDMAAMHQDISEERETVNKKLKE 380
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,142,407
Number of extensions: 285983
Number of successful extensions: 672
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 662
Number of HSP's successfully gapped: 6
Length of query: 374
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,364,969
Effective search space: 2292001506
Effective search space used: 2292001506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)