BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0185800 Os05g0185800|AK065050
         (617 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G52080.1  | chr1:19369788-19371862 FORWARD LENGTH=574          204   1e-52
AT3G25690.1  | chr3:9354061-9357757 FORWARD LENGTH=1005           178   6e-45

>AT1G52080.1 | chr1:19369788-19371862 FORWARD LENGTH=574
          Length = 573

 Score =  204 bits (518), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/372 (39%), Positives = 209/372 (56%), Gaps = 25/372 (6%)

Query: 102 ALVPLPPK--CRTLDDDEEFLLPEFNE-------IVLKEFGRDMGNIATSPAPRVSEEDA 152
            L+ + P+  C  LD+ + FLLPEF E       +V  +      +I T+P    SEE+A
Sbjct: 78  TLIGVSPRREC-DLDEKDVFLLPEFEEEAKKLDLLVCDDCETPRSDI-TAPLAFPSEEEA 135

Query: 153 TKTPEIFELREMVRSLQEREKTLELQLLESYGLQEQDVAVRELENQLKINTVESKLYTLK 212
               EI  LR  VR+L+ERE+ LE +LLE Y L+EQ     EL ++LK+N +E+K++  K
Sbjct: 136 DHENEINRLRNTVRALRERERCLEDKLLEYYSLKEQQKIAMELRSRLKLNQMETKVFNFK 195

Query: 213 IESLQSENERLQAQLTESSKLASELEAARMXXXXXXXXXRQDAEQAKERIASLQEMADSW 272
           I+ LQ+ENE+L+A+  E SK+  EL+ A+            + +Q   +I SL++     
Sbjct: 196 IKKLQAENEKLKAECFEHSKVLLELDMAKSQVQVLKKKLNINTQQHVAQILSLKQRVARL 255

Query: 273 QCKEIITEGKFSAXXXXXXXXXXXXXXXXXXXXV-----VNSRLQQENAHLARRLELTRL 327
           Q +EI       A                    +      N+RLQ EN  L+ +LE  ++
Sbjct: 256 QEEEI------KAVLPDLEADKMMQRLRDLESEINELTDTNTRLQFENFELSEKLESVQI 309

Query: 328 PPVPKPINNMEVKALQE-ADHLRQENDKLAKEVEQLKTDRFSDVEELVYLKWINACLRYE 386
               K     E++ L+E  + LR EN++L K+VEQL+ DR +D+E+LVYL+WINACLRYE
Sbjct: 310 IANSKLEEPEEIETLREDCNRLRSENEELKKDVEQLQGDRCTDLEQLVYLRWINACLRYE 369

Query: 387 LRNQDAPSGKNVARDLSKTLSPQSEEKAKQLIMEYANAGPDEKNFDHIEFCSEYSSSRAS 446
           LR    P+GK VARDLS TLSP SEEKAKQLI+EYA++  D  ++D      E SS    
Sbjct: 370 LRTYQPPAGKTVARDLSTTLSPTSEEKAKQLILEYAHS-EDNTDYDRWSSSQEESSMITD 428

Query: 447 SLGEPDDASIDV 458
           S+   DD+S+D 
Sbjct: 429 SMF-LDDSSVDT 439



>AT3G25690.1 | chr3:9354061-9357757 FORWARD LENGTH=1005
          Length = 1004

 Score =  178 bits (452), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/360 (36%), Positives = 195/360 (54%), Gaps = 29/360 (8%)

Query: 113 LDDDEEFLLPEFNEIVLKEFGR----DMGNIATSPAPRVSE-EDATKTPEIFELREMVRS 167
           LDDD   +LPEF +++  E       D  N+  +   R  E E A    E+  L+++V+ 
Sbjct: 84  LDDD---ILPEFEDLLSGEIEYPLPDDDNNLEKAEKERKYEVEMAYNDGELERLKQLVKE 140

Query: 168 LQEREKTLELQLLESYGLQEQDVAVRELENQLKINTVESKLYTLKIESLQSENERLQAQL 227
           L+ERE  LE +LLE YGL+EQ+  + EL+ QLKI TVE  +  + I SLQ+E ++LQ +L
Sbjct: 141 LEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEEL 200

Query: 228 TESSKLASELEAARMXXXXXXXXXRQDAEQAKERIASLQEMADSWQCKE-------IITE 280
           +++  +  ELE AR          + DA Q K ++  L++   S Q KE          E
Sbjct: 201 SQNGIVRKELEVARNKIKELQRQIQLDANQTKGQLLLLKQHVSSLQMKEEEAMNKDTEVE 260

Query: 281 GKFSAXXXXXXXXXXXXXXXXXXXXVVNSRLQQENAHLARRLELT--RLPPVPKPINNME 338
            K  A                      N  LQ E   L+ +L+    R+  +     + +
Sbjct: 261 RKLKAVQDLEVQVMELKRK--------NRELQHEKRELSIKLDSAEARIATLSNMTESDK 312

Query: 339 V-KALQEADHLRQENDKLAKEVEQLKTDRFSDVEELVYLKWINACLRYELRNQDAPSGKN 397
           V K  +E ++L+  N+ L K+VE L+ +RFS+VEELVYL+W+NACLRYELRN   P+GK 
Sbjct: 313 VAKVREEVNNLKHNNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKI 372

Query: 398 VARDLSKTLSPQSEEKAKQLIMEYANAGPDEKNFDHIEFCSEYSSSRASSLGEPDDASID 457
            ARDLSK LSP+S+ KAK+L++EYA +   E+     +  S YS   +    + D+AS+D
Sbjct: 373 SARDLSKNLSPKSQAKAKRLMLEYAGS---ERGQGDTDLESNYSQPSSPGSDDFDNASMD 429



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.310    0.128    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,048,308
Number of extensions: 430114
Number of successful extensions: 1471
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1468
Number of HSP's successfully gapped: 3
Length of query: 617
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 513
Effective length of database: 8,255,305
Effective search space: 4234971465
Effective search space used: 4234971465
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)