BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0172300 Os05g0172300|J065178A08
(86 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39790.1 | chr4:18462316-18464584 REVERSE LENGTH=658 100 2e-22
AT2G27090.1 | chr2:11567691-11570345 REVERSE LENGTH=744 97 2e-21
AT1G77500.1 | chr1:29121753-29124937 FORWARD LENGTH=880 74 2e-14
AT1G21740.1 | chr1:7641580-7645078 FORWARD LENGTH=954 71 1e-13
AT4G35240.1 | chr4:16761334-16764324 REVERSE LENGTH=866 69 4e-13
AT4G30130.1 | chr4:14735401-14737793 FORWARD LENGTH=726 67 2e-12
AT2G19090.1 | chr2:8265178-8267879 REVERSE LENGTH=815 64 1e-11
AT2G17110.1 | chr2:7443366-7445969 REVERSE LENGTH=734 63 3e-11
AT5G25590.1 | chr5:8906684-8909847 REVERSE LENGTH=776 57 3e-09
AT5G54480.1 | chr5:22118004-22120166 FORWARD LENGTH=721 53 3e-08
AT3G60320.1 | chr3:22292073-22295228 REVERSE LENGTH=797 49 7e-07
AT3G51290.1 | chr3:19039980-19042437 FORWARD LENGTH=635 45 8e-06
AT1G02110.1 | chr1:392939-395434 FORWARD LENGTH=704 45 1e-05
>AT4G39790.1 | chr4:18462316-18464584 REVERSE LENGTH=658
Length = 657
Score = 100 bits (248), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 62/75 (82%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
ASE +RK YD KC LR+QFA+ +A+ +DKTRA KDLHSR+ VAIQ+V++ISKRIE+I
Sbjct: 393 ASEMIRKEYDRKCEQLRNQFAKDHSAKSMDKTRAAAKDLHSRIRVAIQSVESISKRIERI 452
Query: 61 RDEELQPQLVELIQG 75
RD+EL PQL+E +QG
Sbjct: 453 RDDELHPQLLEFLQG 467
>AT2G27090.1 | chr2:11567691-11570345 REVERSE LENGTH=744
Length = 743
Score = 96.7 bits (239), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
S+ VR+ YDEKC +LR + G +Q IDKTRA+VKDLHSR+ VAI +D+IS+RIE++
Sbjct: 446 GSQTVRREYDEKCRILRELESEGKGSQRIDKTRAVVKDLHSRIRVAIHRIDSISRRIEEL 505
Query: 61 RDEELQPQLVELIQG 75
RD ELQPQL ELI+G
Sbjct: 506 RDNELQPQLEELIEG 520
>AT1G77500.1 | chr1:29121753-29124937 FORWARD LENGTH=880
Length = 879
Score = 73.6 bits (179), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 3 EHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRD 62
E +R Y+EKC L+ + G + ID TRA ++ L +++ V I++VD+IS RI K+RD
Sbjct: 564 EKLRAIYEEKCRRLKKMDSHGAESIKIDATRAAIRKLLTKIDVCIRSVDSISSRIHKLRD 623
Query: 63 EELQPQLVELIQG 75
EELQPQL++LI G
Sbjct: 624 EELQPQLIQLIHG 636
>AT1G21740.1 | chr1:7641580-7645078 FORWARD LENGTH=954
Length = 953
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 3 EHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRD 62
E +R Y+EKC L+ + G + ID TRA ++ L +++ V I++VD+IS RI K+RD
Sbjct: 612 EKLRVVYEEKCRTLKKLDSLGAESSKIDTTRAAIRKLLTKLDVCIRSVDSISSRIHKLRD 671
Query: 63 EELQPQLVELIQG 75
EELQPQL +LI G
Sbjct: 672 EELQPQLTQLIHG 684
>AT4G35240.1 | chr4:16761334-16764324 REVERSE LENGTH=866
Length = 865
Score = 69.3 bits (168), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
A E +R +++K L+ RG A +DKTR +V+D+ +++ +AIQ VD IS I KI
Sbjct: 524 AEEKLRLAHEKKLRKLKRLDQRGAEAIKVDKTRKLVRDMSTKIRIAIQVVDKISVTINKI 583
Query: 61 RDEELQPQLVELIQG 75
RDE+L PQL LIQG
Sbjct: 584 RDEDLWPQLNALIQG 598
>AT4G30130.1 | chr4:14735401-14737793 FORWARD LENGTH=726
Length = 725
Score = 66.6 bits (161), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 60/75 (80%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
+ + +R Y++KC +LR+Q +G ++ +DKTRA ++DLH+++ V+I ++++IS+RIE +
Sbjct: 419 SGDRIRIAYEKKCLVLRNQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETL 478
Query: 61 RDEELQPQLVELIQG 75
RD+EL PQL+EL+QG
Sbjct: 479 RDQELLPQLLELVQG 493
>AT2G19090.1 | chr2:8265178-8267879 REVERSE LENGTH=815
Length = 814
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 58/75 (77%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
+ E VR+ Y++KC LR+Q +G + +DKTRA ++DL +++ V+I ++++ISKRIE +
Sbjct: 500 SGERVRRAYEKKCMQLRNQDVKGDDPLAVDKTRATIRDLDTQIKVSIHSIESISKRIETL 559
Query: 61 RDEELQPQLVELIQG 75
RD+EL PQL+EL++G
Sbjct: 560 RDQELLPQLLELVEG 574
>AT2G17110.1 | chr2:7443366-7445969 REVERSE LENGTH=734
Length = 733
Score = 62.8 bits (151), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
A E +R +++K L+ RG Q +D TR +V+ L +++ +AIQ VD IS I KI
Sbjct: 421 AEEKMRVNHEKKLRKLKRMDERGAENQKVDSTRKLVRSLSTKIRIAIQVVDKISVTINKI 480
Query: 61 RDEELQPQLVELIQG 75
RDEEL QL ELIQG
Sbjct: 481 RDEELWLQLNELIQG 495
>AT5G25590.1 | chr5:8906684-8909847 REVERSE LENGTH=776
Length = 775
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 9 YDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRDEELQPQ 68
Y +K +LL RG +A+ ++KT+A V LH+R V +Q++D+ + ++RD++L P+
Sbjct: 439 YQKKVSLLNRHKKRGASAETVEKTKAAVSHLHTRYIVDMQSMDSTVSEVNRLRDDQLYPR 498
Query: 69 LVELIQG 75
LV L++G
Sbjct: 499 LVALVEG 505
>AT5G54480.1 | chr5:22118004-22120166 FORWARD LENGTH=721
Length = 720
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
A E +R Y++ +L + G + + + +VK S+V+V+++AV++IS RI KI
Sbjct: 418 AEEKLRVAYEKAYKILNNLDQNGAESSELYEAETLVKLHLSKVNVSVRAVESISMRIHKI 477
Query: 61 RDEELQPQLVELIQGYKLKHHLVA 84
RDEEL Q++E+I G+K +A
Sbjct: 478 RDEELSFQVIEIINGFKTMWRFLA 501
>AT3G60320.1 | chr3:22292073-22295228 REVERSE LENGTH=797
Length = 796
Score = 48.5 bits (114), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
A E + +++K + L+ Q +G + +DKT+A + L S + V QAV S I ++
Sbjct: 460 AREGFKIEHEKKLSQLQSQEYKGEDEAKLDKTKASITRLQSLIIVTSQAVTTTSTAIIRL 519
Query: 61 RDEELQPQLVELIQGY 76
RD +L PQLVEL G+
Sbjct: 520 RDTDLVPQLVELCHGF 535
>AT3G51290.1 | chr3:19039980-19042437 FORWARD LENGTH=635
Length = 634
Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 29 IDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRDEELQPQLVELIQGYKLKHHLV 83
+K + V+ L S++SV+ QA+ + S I K+R+ EL PQLVEL++G + H V
Sbjct: 337 TEKAKKDVEKLESQLSVSSQAIQSASNEIIKLRETELYPQLVELVKGSMYESHQV 391
>AT1G02110.1 | chr1:392939-395434 FORWARD LENGTH=704
Length = 703
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 1 ASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKI 60
A E V+ +++K + L+ Q +G + +DKT+ + L S + V+ +AV S I ++
Sbjct: 376 AREGVKIEHEKKLSALQSQEYKGGDESKLDKTKTSITRLQSLIIVSSEAVLTTSNAILRL 435
Query: 61 RDEELQPQLVELIQG 75
RD +L PQLVEL G
Sbjct: 436 RDTDLVPQLVELCHG 450
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,585,712
Number of extensions: 45468
Number of successful extensions: 220
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 14
Length of query: 86
Length of database: 11,106,569
Length adjustment: 57
Effective length of query: 29
Effective length of database: 9,543,857
Effective search space: 276771853
Effective search space used: 276771853
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 104 (44.7 bits)