BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0169200 Os05g0169200|AK069215
(382 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392 447 e-126
AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394 446 e-126
AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426 374 e-104
AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375 303 9e-83
AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313 103 1e-22
AT1G54710.1 | chr1:20417019-20420733 REVERSE LENGTH=928 55 7e-08
AT1G03380.1 | chr1:836155-840362 FORWARD LENGTH=960 50 2e-06
>AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392
Length = 391
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/367 (58%), Positives = 267/367 (72%), Gaps = 10/367 (2%)
Query: 11 DDDGVELLSVSWNQDNSCFIAATTNGFRVFSCKPFHETMRRMFGPNGGIGIAEMLFRTSI 70
+ D EL+SVSWNQD SCF A T++GFR+++C+PF ET RR +GG I EMLFR++I
Sbjct: 30 ESDEAELVSVSWNQDYSCFAAGTSHGFRIYNCEPFKETFRREL-KDGGFKIVEMLFRSNI 88
Query: 71 FGLAGAESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVVLEKTINVYRF 130
L G N+++P + +WDD+ R I ++ F SEIRAV+L +D VVVLE I VY F
Sbjct: 89 LALVGGGPNSQYPSNKVLIWDDHQGRCISEFTFRSEIRAVKLRRDRIVVVLEHKIYVYNF 148
Query: 131 KDLRLFYQARTVSNPNGLCCLSHHANASVFACPGTSKGQVLIEHFGLKETRFIAAHDSPL 190
DLRL +Q ++NP GLCCLSHH N SV ACPG +G+V +EHFGL + I AHDS +
Sbjct: 149 MDLRLLHQIENMANPRGLCCLSHHMNTSVLACPGIRRGEVRVEHFGLNMVQIINAHDSNI 208
Query: 191 SCMTMALDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIALSPNVQWLAVS 250
+CMT+ LDG LLATAS +GTLIRIFNT DGT +QEVRRG+DRA+IYSIALSPNVQWLAVS
Sbjct: 209 ACMTLTLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVS 268
Query: 251 SDKGTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYGSTVPVTQTKIGSNTSSSLSFM 310
SDKGTVH+FSLRV+ EDA E T+ S P+ G+N SSLSF+
Sbjct: 269 SDKGTVHIFSLRVRVIGEDAYSTEHETSS---------NSLQPLVSPASGANPGSSLSFL 319
Query: 311 KGILPKYFSSEWSFAQFRLPEITRYIMAFGDQDTVMMIGLDGSFYRYSFDPVNGGEMMLK 370
+G+LPKYFSSEWSF+QF +PE+T+Y AFG Q+T+ +IGLDGSFYR +FDPVNGGEM
Sbjct: 320 RGVLPKYFSSEWSFSQFHVPEVTQYFAAFGAQNTIAIIGLDGSFYRCNFDPVNGGEMTQL 379
Query: 371 EYHLFLK 377
E+ FLK
Sbjct: 380 EHFHFLK 386
>AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394
Length = 393
Score = 446 bits (1147), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/374 (57%), Positives = 273/374 (72%), Gaps = 4/374 (1%)
Query: 4 VEEASGSDDDGVELLSVSWNQDNSCFIAATTNGFRVFSCKPFHETMRRMFGPNGGIGIAE 63
+ E+ + EL+SV WNQD+SCF A T++GFR+++C+PF ET RR +GG I E
Sbjct: 19 LPESESMKKEEAELVSVCWNQDSSCFAAGTSHGFRIYNCEPFKETFRREL-KDGGFKIVE 77
Query: 64 MLFRTSIFGLAGAESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVVLEK 123
MLFR++I L G N+++P + + +WDD+ R I ++ F SEIRAV+L +D VVVLE
Sbjct: 78 MLFRSNILALVGGGPNSQYPSSKVLIWDDHQSRCISEFAFRSEIRAVKLRRDRIVVVLEH 137
Query: 124 TINVYRFKDLRLFYQARTVSNPNGLCCLSHHANASVFACPGTSKGQVLIEHFGLKETRFI 183
I VY F DLRL +Q T +NP GLCCLSHH+N SV ACPG ++G++ +EHFGL + I
Sbjct: 138 KIYVYNFMDLRLLHQIETQANPRGLCCLSHHSNTSVLACPGLNRGEIRVEHFGLNMVQII 197
Query: 184 AAHDSPLSCMTMALDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIALSPN 243
AHDS ++CMT+ LDG LLATAS +GTLIRIFNT DGT +QEVRRG+DRA+IYSIALSPN
Sbjct: 198 NAHDSSIACMTLTLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPN 257
Query: 244 VQWLAVSSDKGTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYGSTVPVTQTKIGSNT 303
VQWLAVSSDKGTVH+FSLRV+ ED+ E+ Q N + + V T IG+N
Sbjct: 258 VQWLAVSSDKGTVHIFSLRVRVVGEDSYSTENGALLTQQNYSNSLQGLVSPT---IGTNP 314
Query: 304 SSSLSFMKGILPKYFSSEWSFAQFRLPEITRYIMAFGDQDTVMMIGLDGSFYRYSFDPVN 363
SSLSFM+G+LPKYFSSEWS+AQF + E+T++ AFG +TV +IG+DGSFYR SFDPVN
Sbjct: 315 GSSLSFMRGVLPKYFSSEWSYAQFHVSEVTQFFAAFGSNNTVAIIGMDGSFYRCSFDPVN 374
Query: 364 GGEMMLKEYHLFLK 377
GGEM EY F+K
Sbjct: 375 GGEMGQLEYIHFMK 388
>AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426
Length = 425
Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/362 (52%), Positives = 242/362 (66%), Gaps = 20/362 (5%)
Query: 17 LLSVSWNQDNSCFIAATTNGFRVFSCKPFHETMRRMFGPNGGIGIAEMLFRTSIFGLAGA 76
+L +S+NQD++CF T GFR+ +C PF E RR F GG+ + EMLFR +I L G
Sbjct: 78 VLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEMLFRCNILALVGG 137
Query: 77 ESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVVLEKTINVYRFKDLRLF 136
+ ++PP + +WDD+ R I + +F S++R+VRL +D +VVLE+ I VY F DL+L
Sbjct: 138 GPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLM 197
Query: 137 YQARTVSNPNGLCCLSHHANASVFACPGTSKGQVLIEHFGLKETRFIAAHDSPLSCMTMA 196
+Q T++NP GLC +S + V CPG KGQV IEH+ K T+F+ AHDS ++C +
Sbjct: 198 HQIETIANPKGLCAVSQGVGSMVLVCPGLQKGQVRIEHYASKRTKFVMAHDSRIACFALT 257
Query: 197 LDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIALSPNVQWLAVSSDKGTV 256
DG LLATAS +GTL+RIFNT DGT QEVRRG DRAEIYS+A S N QWLAVSSDKGTV
Sbjct: 258 QDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV 317
Query: 257 HVFSLRVKDAEEDAKKGESATAGAQVNDNCNYGSTVPVTQTKIGSNTSSSLSFMKGILPK 316
HVF L+V +G+QV D+ + S+ SSSLS KG+LP+
Sbjct: 318 HVFGLKV-------------NSGSQVKDSSR------IAPDATPSSPSSSLSLFKGVLPR 358
Query: 317 YFSSEWSFAQFRLPEITRYIMAFGDQ-DTVMMIGLDGSFYRYSFDPVNGGEMMLKEYHLF 375
YFSSEWS AQFRL E T+YI AFG Q +TV+++G+DGSFYR FDPVNGGEM EYH
Sbjct: 359 YFSSEWSVAQFRLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNC 418
Query: 376 LK 377
LK
Sbjct: 419 LK 420
>AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375
Length = 374
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 225/364 (61%), Gaps = 35/364 (9%)
Query: 15 VELLSVSWNQDNSCFIAATTNGFRVFSCKPFHETMRRMFGPNGGIGIAEMLFRTSIFGLA 74
+++LSV+WNQ S FI T +GF V+SCKP + G +AEMLF +++F
Sbjct: 31 LKVLSVAWNQVCSGFIVGTNHGFNVYSCKPMIKKSISRAPHESGFKVAEMLFLSNLFAFV 90
Query: 75 G-AESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVVLEKTINVYRFKDL 133
G +N+E+PP + +WDDY + + F SE+ AV+L++++ VVVL++ I VY F +L
Sbjct: 91 GNGYNNSEYPPNKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQNIYVYTFNNL 150
Query: 134 RLFYQARTVSNPNGLCCLSHHANASVFACPGTSKGQVLIEHFGLKETRFIAAHDSPLSCM 193
++ T+ NP GLCC++H + +V ACPG GQV + +FI AHDS ++CM
Sbjct: 151 KVDRVIETLMNPKGLCCVTHVESKAVLACPGFHPGQVQVHDLRWNVIKFIKAHDSAIACM 210
Query: 194 TMALDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIALSPNVQWLAVSSDK 253
T+ LDG+LLATAS +GTLIRIFN DGT +QE RRG++RAEIY++A+S N++W+A SS+K
Sbjct: 211 TLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAISSNLKWVAASSEK 270
Query: 254 GTVHVFSLRVKDAEEDAKKGESATAGAQVNDNCNYGSTVPVTQTKIGSNTSSSLSFMKGI 313
GT+HVF LR D +SS SF++ I
Sbjct: 271 GTLHVFRLRPDILSFDP---------------------------------ASSSSFIRVI 297
Query: 314 LPKY-FSSEWSFAQFRLPEITRYIMAFGDQDTVMMIGLDGSFYRYSFDPVNGGEMMLKEY 372
LPKY + +E SFAQF LP T++I+ FG ++TV+++G+DGSF R FD +GG+M+ E+
Sbjct: 298 LPKYLYENERSFAQFSLPASTKFIVGFGSENTVLLVGIDGSFRRCKFDHADGGQMVELEH 357
Query: 373 HLFL 376
F
Sbjct: 358 KYFF 361
>AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313
Length = 312
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 5/205 (2%)
Query: 64 MLFRTSIFGLAGAESNTEFPPTMLQLWDDYNERRIHKYNFTSEIRAVRLSKDYFVVVLEK 123
ML+ + + + GA P L L+ + + NF + I AVR++K VVVL +
Sbjct: 1 MLYSSDLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLE 60
Query: 124 TINVYRFKDLRLFYQARTVSNPNGLCCLSHHANASVFACPG-TSKGQVLIEH-FGLKETR 181
VY L + TV NP GL S A P T+KG VL+ + L+
Sbjct: 61 KTFVYDLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHS 120
Query: 182 FIAAHDSPLSCMTMALDGTLLATASVRGTLIRIFNTRDGTCVQEVRRGLDRAEIYSIALS 241
I AH SPL+ + ++ +G +AT S +GTLIR+ + T RRG + IYS++
Sbjct: 121 EIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFG 180
Query: 242 PNVQW---LAVSSDKGTVHVFSLRV 263
P+ Q L +S G++H FSL +
Sbjct: 181 PSTQLPDILIATSSSGSIHAFSLSL 205
>AT1G54710.1 | chr1:20417019-20420733 REVERSE LENGTH=928
Length = 927
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 168 GQVLIEHFGLKETRFIAA----HDSPLSCMTMALDGTLLATASVRGTLIRIFN-----TR 218
G V+++ F E+R I A H SP+S + GTLL TAS+ G I +F T+
Sbjct: 361 GTVIVKDF---ESRAIIAQFRAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTK 417
Query: 219 DGTCVQ------------EVRRGLDRAEIYSIALSPNVQWLAVSSDKGTVHVFSL 261
+G Q ++ RG+ A I I S QW+A+ S K T H++ L
Sbjct: 418 NGPGAQSYDWSSSHVPLYKLHRGMTSAVIQDICFSSYSQWIAIVSSKSTCHIYVL 472
>AT1G03380.1 | chr1:836155-840362 FORWARD LENGTH=960
Length = 959
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 185 AHDSPLSCMTMALDGTLLATASVRGTLIRIF-------NTRDGTCVQE----------VR 227
AH SP+S + GTLL TASV G I +F + G E +
Sbjct: 376 AHTSPISALCFDPSGTLLVTASVCGNNINVFQIMPSRSHNAPGDLSYEWESSHVHLFKLH 435
Query: 228 RGLDRAEIYSIALSPNVQWLAVSSDKGTVHVFSLRV--KDAEEDAKKGESAT 277
RG+ A + I S QW+A+ S KGT H+F L DA +GE T
Sbjct: 436 RGITSAIVQDICFSQQSQWVAIISSKGTCHIFVLNSSGSDAAFQPCEGEEPT 487
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,366,547
Number of extensions: 339137
Number of successful extensions: 874
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 866
Number of HSP's successfully gapped: 8
Length of query: 382
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 282
Effective length of database: 8,364,969
Effective search space: 2358921258
Effective search space used: 2358921258
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)