BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0163300 Os05g0163300|AK105598
(275 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247 196 9e-51
AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250 160 8e-40
AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248 129 1e-30
AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248 129 2e-30
AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248 115 2e-26
AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421 79 2e-15
AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255 78 5e-15
AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421 72 4e-13
AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423 69 4e-12
AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404 66 2e-11
AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425 57 1e-08
>AT5G03170.1 | chr5:752898-753638 REVERSE LENGTH=247
Length = 246
Score = 196 bits (499), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
ITAIL KAGQFT F++LL+STQA +QIN Q+ +SSS GLTVFAP DNAF +L +GTLN
Sbjct: 37 ITAILEKAGQFTLFIRLLKSTQASDQINTQLN--SSSSNGLTVFAPTDNAFNSLKSGTLN 94
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNISTG 173
LSDQQK LVQFHV+ L+ M QF TVSNPLRTQAG+ GK+PLN+T+ G++VNI+TG
Sbjct: 95 SLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTG 154
Query: 174 VVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
VV+ATV N++YS +L VYQVD+VLLP A++
Sbjct: 155 VVSATVANSVYSDKQLAVYQVDQVLLPLAMF 185
>AT5G60490.1 | chr5:24325916-24326665 REVERSE LENGTH=250
Length = 249
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
+T IL KAGQFT F++LL+ST Q+ Q+ +S G+T+FAP D++F L GTLN
Sbjct: 40 VTKILEKAGQFTVFIRLLKSTGVANQLYGQLN---NSDNGITIFAPSDSSFTGLKAGTLN 96
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNISTG 173
L+D+Q+ L+QFHV+ + + + F T+SNPLRTQAG++A G +PLNVT G+ VNI++G
Sbjct: 97 SLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156
Query: 174 VVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
V N TV +YS +L VYQVDKVLLP ++
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187
>AT5G44130.1 | chr5:17761128-17761871 FORWARD LENGTH=248
Length = 247
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 92/152 (60%), Gaps = 4/152 (2%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
ITAIL K GQF ++LL +TQ G QIN QI SSS G+TV AP DNAF L GTLN
Sbjct: 37 ITAILEKGGQFVTLIRLLNTTQIGNQINIQIN---SSSEGMTVLAPTDNAFQNLKPGTLN 93
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQA-GETAAGKYPLNVTAEGSRVNIST 172
KLS + L+ +HV + +VSNP+RTQA G G Y LN T +G++VN+ST
Sbjct: 94 KLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVST 153
Query: 173 GVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
GVV + +L L VY VD VLLP ++
Sbjct: 154 GVVETRLSTSLRQERPLAVYVVDMVLLPEEMF 185
>AT1G03870.1 | chr1:982625-983368 REVERSE LENGTH=248
Length = 247
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
+TAIL K GQFT F+ LL TQ G Q+N Q+ SSS G+TVFAP DNAF L GTLN
Sbjct: 40 LTAILEKGGQFTTFIHLLNITQVGSQVNIQVN---SSSEGMTVFAPTDNAFQNLKPGTLN 96
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNISTG 173
+LS + L+ +HV M +VSNP+RTQA G Y LN T + +++N+STG
Sbjct: 97 QLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTG 156
Query: 174 VVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
V + N+L L VY VD VLLP ++
Sbjct: 157 YVETRISNSLRQQRPLAVYVVDMVLLPGEMF 187
>AT2G20520.1 | chr2:8840663-8841406 FORWARD LENGTH=248
Length = 247
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
+TAIL QFT +QLL +TQ G Q++ Q+ SS G+T+FAP DNAF L GTLN
Sbjct: 39 LTAILEAGHQFTTLIQLLNTTQVGFQVSVQLN---SSDQGMTIFAPTDNAFNKLKPGTLN 95
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVT--AEGSRVNIS 171
L+ QQ+ L+ +H++ ++ SNP+RTQA G + LN T A+ ++VN+S
Sbjct: 96 SLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVS 155
Query: 172 TGVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
TGVV ++N L L VY VD VLLP L+
Sbjct: 156 TGVVETRINNALRQQFPLAVYVVDSVLLPEELF 188
>AT3G46550.1 | chr3:17136612-17137874 REVERSE LENGTH=421
Length = 420
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGT-L 112
+T IL F L LL ++ + N +G G+TVF P D+AF+ LP+ L
Sbjct: 208 LTQILINGHNFNVALSLLVASGVITEFENDERG-----AGITVFVPTDSAFSDLPSNVNL 262
Query: 113 NKLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAG--ETAAGKYPLNVT-AEGSRVN 169
L +QK +++FHV+ + + ++++NP++ E AG Y LN++ GS V
Sbjct: 263 QSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVT 322
Query: 170 ISTGVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
I++GVV A V T + + + V+ V KVLLP L+
Sbjct: 323 INSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357
>AT2G04780.1 | chr2:1677488-1678252 FORWARD LENGTH=255
Length = 254
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
+T +L+ AG F FL L ST E NQ ++ G+T+F P D+AF A L+
Sbjct: 47 LTELLSVAGPFHTFLDYLLSTGVIETFQNQAN---NTEEGITIFVPKDDAFKAQKNPPLS 103
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSN--PLRTQAGETAAGKYPLNVTAEGSRVNIS 171
L+ Q LV FH + +++F +S P+ T AG G+Y L T V I
Sbjct: 104 NLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAG----GQYSLKFTDVSGTVRID 159
Query: 172 TGVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
+ V ++++S D + VYQV++VLLP A++
Sbjct: 160 SLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIF 192
>AT2G45470.1 | chr2:18742797-18744059 REVERSE LENGTH=421
Length = 420
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
IT +L KAG T F LL S+ + + ++ GLTVFAP D AF A L
Sbjct: 190 ITGLLEKAGCKT-FANLLVSSGVLKTYESAVEK------GLTVFAPSDEAFKAEGVPDLT 242
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNISTG 173
KL+ + SL+++H ++ P T N + T A AGK+ L + G V + TG
Sbjct: 243 KLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLA-TNGAGKFDLTTSTSGDEVILHTG 301
Query: 174 VVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
V + + +T+ +V++ VD VLLP L+
Sbjct: 302 VAPSRLADTVLDATPVVIFTVDNVLLPAELF 332
>AT3G60900.1 | chr3:22499573-22500841 REVERSE LENGTH=423
Length = 422
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAALPTGTLN 113
IT +L KAG T F LL S+ + + ++ GLTVFAP D AF A L
Sbjct: 191 ITGLLEKAGCKT-FANLLVSSGVIKTFESTVEK------GLTVFAPSDEAFKARGVPDLT 243
Query: 114 KLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNISTG 173
L+ + SL+++H ++ P T + + T A AGKY L + G V + TG
Sbjct: 244 NLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLA-TNGAGKYDLTTSTSGDEVILHTG 302
Query: 174 VVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
V + + +T+ +V++ VD VLLP L+
Sbjct: 303 VGPSRLADTVVDETPVVIFTVDNVLLPAELF 333
>AT4G12730.1 | chr4:7491598-7492809 REVERSE LENGTH=404
Length = 403
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 54 ITAILTKAGQFTKFLQLLQSTQAGEQINNQIKGKASSSGGLTVFAPPDNAFAA-LPTGTL 112
+T IL K G F +L+ST A + + + GGLTVF P D+A +P
Sbjct: 191 LTTILEKQG-CKAFSDILKSTGADKTFQDTV------DGGLTVFCPSDSAVGKFMPK--F 241
Query: 113 NKLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRTQAGETAAGKYPLNVTAEGSRVNIST 172
LS KT+LV +H + + + + + T A E K+ V +G V + T
Sbjct: 242 KSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATE-GNNKFDFTVQNDGEDVTLET 300
Query: 173 GVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
VV A V TL + L+VY++DKVLLP +Y
Sbjct: 301 DVVTAKVMGTLKDQEPLIVYKIDKVLLPREIY 332
>AT5G55730.1 | chr5:22558375-22560392 REVERSE LENGTH=425
Length = 424
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 89 SSSGGLTVFAPPDNAFAA-LPTGTLNKLSDQQKTSLVQFHVVSALLPMAQFDTVSNPLRT 147
S GG+TVF P D+A LP L+ +K + + F V MA + + P+ T
Sbjct: 216 SLEGGMTVFCPGDDAMKGFLPK--YKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNT 273
Query: 148 QAGETAAGKYPLNVTAEGSRVNISTGVVNATVDNTLYSGDRLVVYQVDKVLLPWALY 204
A + A K+ L V +G +V + T + + +TL L +Y DKVLLP L+
Sbjct: 274 LATD-GANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF 329
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,016,420
Number of extensions: 98920
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 11
Length of query: 275
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 178
Effective length of database: 8,447,217
Effective search space: 1503604626
Effective search space used: 1503604626
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)