BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0162500 Os05g0162500|AK067124
(126 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59700.1 | chr5:24052613-24055102 REVERSE LENGTH=830 110 3e-25
AT3G46290.1 | chr3:17013009-17015501 FORWARD LENGTH=831 108 8e-25
AT5G54380.1 | chr5:22077313-22079880 REVERSE LENGTH=856 95 8e-21
AT4G39110.1 | chr4:18222483-18225119 REVERSE LENGTH=879 91 2e-19
AT5G24010.1 | chr5:8113910-8116384 FORWARD LENGTH=825 89 6e-19
AT5G28680.1 | chr5:10719437-10722013 REVERSE LENGTH=859 88 1e-18
AT2G21480.1 | chr2:9202753-9205368 REVERSE LENGTH=872 88 1e-18
AT5G61350.1 | chr5:24667973-24670501 FORWARD LENGTH=843 86 6e-18
AT3G51550.1 | chr3:19117877-19120564 REVERSE LENGTH=896 84 2e-17
AT3G04690.1 | chr3:1273386-1275938 REVERSE LENGTH=851 80 3e-16
AT2G39360.1 | chr2:16437592-16440039 REVERSE LENGTH=816 75 1e-14
AT1G30570.1 | chr1:10828933-10831482 FORWARD LENGTH=850 74 2e-14
AT2G23200.1 | chr2:9879351-9881855 FORWARD LENGTH=835 70 4e-13
AT5G39000.1 | chr5:15611860-15614481 FORWARD LENGTH=874 55 9e-09
AT5G38990.1 | chr5:15608824-15611466 FORWARD LENGTH=881 54 3e-08
AT3G03770.1 | chr3:945303-948436 REVERSE LENGTH=803 46 5e-06
>AT5G59700.1 | chr5:24052613-24055102 REVERSE LENGTH=830
Length = 829
Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 76/120 (63%), Gaps = 10/120 (8%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G IRP+SLRK+GET EKCLA+YGV+RP+MGDVLWNLE+ LQLQEA D D
Sbjct: 710 IIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVDGDPED 769
Query: 77 SMNQISELPSNAQRI----SSLEISTADESR------TAMDYSQMSTSNAFSQLINTEGR 126
S N I ELP +S+ S A E R + D S +S S FSQLI +EGR
Sbjct: 770 STNMIGELPLRFNDYNHGDTSVNFSVAKEGRFDEEESSVDDSSGVSMSKVFSQLIKSEGR 829
>AT3G46290.1 | chr3:17013009-17015501 FORWARD LENGTH=831
Length = 830
Score = 108 bits (269), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID+ + G IRP+SLRK+ ET EKCLA+YGV+RP+MGDVLWNLE+ LQLQEA D D
Sbjct: 713 IIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIDGEPED 772
Query: 77 -SMNQISELPSNAQRISSLEIS-----TAD--ESRTAMDYSQMSTSNAFSQLINTEGR 126
S N I ELP S + S TA E + D S +S S FSQL+ +EGR
Sbjct: 773 NSTNMIGELPPQINNFSQGDTSVNVPGTAGRFEESSIDDLSGVSMSKVFSQLVKSEGR 830
>AT5G54380.1 | chr5:22077313-22079880 REVERSE LENGTH=856
Length = 855
Score = 95.1 bits (235), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
I+D + G + P SL+K+GET EKCLAEYGV+RP+MGDVLWNLE+ LQL+E + D
Sbjct: 738 IMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPD 797
Query: 77 --SMNQISELPSNAQRISSLEISTADE------SRTAMDYSQMSTSNAFSQLINTEGR 126
S N I +P +S D + T D +TS FSQL++ GR
Sbjct: 798 DNSTNHIPGIPMAPMEPFDNSMSIIDRGGVNSGTGTDDDAEDATTSAVFSQLVHPRGR 855
>AT4G39110.1 | chr4:18222483-18225119 REVERSE LENGTH=879
Length = 878
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 22/129 (17%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQE--------- 67
IID +AGTI PES++K+ E EKCL +YGV+RPTMGDVLWNLE+ LQLQE
Sbjct: 753 IIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNLEYALQLQEAFTQGKAEE 812
Query: 68 ---AGPDMSNIDSMNQISELPSNAQRISSLEISTA-------DESRTAMDYSQMSTSNAF 117
A PD+ S+ +S+ +++ E +T + S TA+D + S + F
Sbjct: 813 TENAKPDVVTPGSV-PVSDPSPITPSVTTNEAATVPVPAKVEENSGTAVD--EHSGTAMF 869
Query: 118 SQLINTEGR 126
+Q N GR
Sbjct: 870 TQFANLNGR 878
>AT5G24010.1 | chr5:8113910-8116384 FORWARD LENGTH=825
Length = 824
Score = 89.0 bits (219), Expect = 6e-19, Method: Composition-based stats.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 12/115 (10%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
I+D IA I+P SL+K+ ET EKC A+YGV+RPT+GDVLWNLE VLQLQE+GP +
Sbjct: 717 IVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQESGPLNIPEE 776
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAMDYSQ-----MSTSNAFSQLINTEGR 126
+++ + Q +S + S DY +S++ FSQL+ GR
Sbjct: 777 DYGDVTDPRTARQGLS-------NGSNIERDYGDGTSGIISSTQVFSQLMTNAGR 824
>AT5G28680.1 | chr5:10719437-10722013 REVERSE LENGTH=859
Length = 858
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G I PE L+K+ +T EKCL++ G++RPTMGDVLWNLEF LQLQE +
Sbjct: 749 IIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLEFALQLQETADGSRHRT 808
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
N + +A ES D S S FSQ++N +GR
Sbjct: 809 PSNGGGSVDLGGGGGGVTVNISAGESDLGDDLSSEENSGIFSQIVNPKGR 858
>AT2G21480.1 | chr2:9202753-9205368 REVERSE LENGTH=872
Length = 871
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA 68
IID + G + PES++K+ E EKCLA+YGV+RPTMGDVLWNLE+ LQLQEA
Sbjct: 752 IIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLEYALQLQEA 803
>AT5G61350.1 | chr5:24667973-24670501 FORWARD LENGTH=843
Length = 842
Score = 85.5 bits (210), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA 68
IID +I GTI SLRK+ E EKCLAEYGV+RP MGDVLWNLE+ LQLQEA
Sbjct: 758 IIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEA 809
>AT3G51550.1 | chr3:19117877-19120564 REVERSE LENGTH=896
Length = 895
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 21/131 (16%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGP------ 70
I+D + G I PE +K+ ET KC+ + G+ERP+MGDVLWNLEF LQLQE+
Sbjct: 765 IVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAEENGKGV 824
Query: 71 ----DMSNI-----------DSMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSN 115
DM I D + + E R S +++S S + D ++ S
Sbjct: 825 CGDMDMDEIKYDDGNCKGKNDKSSDVYEGNVTDSRSSGIDMSIGGRSLASEDSDGLTPSA 884
Query: 116 AFSQLINTEGR 126
FSQ++N +GR
Sbjct: 885 VFSQIMNPKGR 895
>AT3G04690.1 | chr3:1273386-1275938 REVERSE LENGTH=851
Length = 850
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G I E L+K+ +T EKCL + G+ERPTMGDVLWNLEF LQLQE D +
Sbjct: 745 IIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETA-DGTRHR 803
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
+ N + ++ ++ D+ D S + FSQ++N +GR
Sbjct: 804 TPNNGGSSEDLGRGGMAVNVAGRDD---VSDLSSEDNTEIFSQIVNPKGR 850
>AT2G39360.1 | chr2:16437592-16440039 REVERSE LENGTH=816
Length = 815
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
IID + G ++ E ++KY E EKCL++ G+ERP MGD+LWNLEF+LQ+Q + +D
Sbjct: 716 IIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQAKDEKAAMVD 775
Query: 77 SMNQISELPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
+ S + S Q D + +S S F+Q++ E R
Sbjct: 776 DKPEASVVGSTMQF----------SVNGVGDIAGVSMSKVFAQMVREETR 815
>AT1G30570.1 | chr1:10828933-10831482 FORWARD LENGTH=850
Length = 849
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEA 68
IID + G PESL KYGE EKCLA+ G RP MG+VLW+LE+VLQ+ EA
Sbjct: 748 IIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVLQIHEA 799
>AT2G23200.1 | chr2:9879351-9881855 FORWARD LENGTH=835
Length = 834
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQ------EAG- 69
I+D + G I SL+K+ E EKCL EYG ERP+M DV+W+LE+VLQLQ EA
Sbjct: 716 ILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYVLQLQMMTNRREAHE 775
Query: 70 PDMSNIDSMNQISE---LPSNAQRISSLEISTADESRTAMDYSQMSTSNAFSQLINTEGR 126
D + I+S + + S++ +S+ DES+ ++ S + FSQL ++ R
Sbjct: 776 EDSTAINSGGSLVAPRLMVSDSFSTNSI-FQNGDESKNRFGFTDSSETRVFSQLKISDAR 834
>AT5G39000.1 | chr5:15611860-15614481 FORWARD LENGTH=874
Length = 873
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQE-AGPDMSNI 75
IID ++ I SL K+ E +C+ + G+ERP M DV+W LEF LQL E A N+
Sbjct: 751 IIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALEFALQLHETAKKKNDNV 810
Query: 76 DSMN 79
+S++
Sbjct: 811 ESLD 814
>AT5G38990.1 | chr5:15608824-15611466 FORWARD LENGTH=881
Length = 880
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQE-AGPDMSNI 75
IID + I S+ K+ E +C+ + G+ERP M DV+W LEF LQL E A N+
Sbjct: 758 IIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALEFALQLHETAKKKNDNV 817
Query: 76 DSMN 79
+S++
Sbjct: 818 ESLD 821
>AT3G03770.1 | chr3:945303-948436 REVERSE LENGTH=803
Length = 802
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 17 IIDKRIAGTIRPESLRKYGETVEKCLAEYGVERPTMGDVLWNLEFVLQLQEAGPDMSNID 76
++D + +SL+ E +CL + +ERP++ DVLWNL+F Q+QE SN
Sbjct: 706 MVDPTVHRACSDQSLKTMMEICVRCLLKDPLERPSIEDVLWNLQFASQVQEGWLQNSNPS 765
Query: 77 S-MNQISELPSNAQRISSLEISTADESR 103
S + S S+ S L ++T + R
Sbjct: 766 SNLGSPSPAASSLPPPSRLHVTTLESPR 793
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,382,116
Number of extensions: 84931
Number of successful extensions: 438
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 432
Number of HSP's successfully gapped: 16
Length of query: 126
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 39
Effective length of database: 8,721,377
Effective search space: 340133703
Effective search space used: 340133703
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 105 (45.1 bits)