BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0154600 Os05g0154600|AK111816
         (436 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05545.1  | chr3:1609436-1612133 FORWARD LENGTH=426            186   2e-47
AT2G47700.1  | chr2:19552506-19554351 REVERSE LENGTH=359          160   1e-39
AT2G15260.1  | chr2:6630528-6634008 FORWARD LENGTH=363             84   2e-16
AT4G13490.1  | chr4:7839137-7840284 REVERSE LENGTH=227             83   3e-16

>AT3G05545.1 | chr3:1609436-1612133 FORWARD LENGTH=426
          Length = 425

 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/149 (61%), Positives = 111/149 (74%), Gaps = 8/149 (5%)

Query: 30  VSCSICLDAVVAAGGERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYAN 89
           V+CSICL+ VV   G+R+ A LQC H+FHLDCIGSAFNAKGVMQCPNCRK+EKG WLYAN
Sbjct: 35  VACSICLETVVK-NGDRAWANLQCDHQFHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYAN 93

Query: 90  GSRPTQDVNMDEWAHDEDLYDV-SYSEMPFRFHWCPFGRLAQLPSFFEEGESSPPVTFHD 148
           G R   + N+++W H+ED+YD+ +YSEM F  HWCPFG  A+LPS FE+GE SP  ++HD
Sbjct: 94  GCRSYPEFNVEDWVHEEDIYDIGAYSEMSFGVHWCPFGSSARLPS-FEDGEFSPS-SYHD 151

Query: 149 FMGQHMFTEHVAAVSSAPGAAHPCPYVAY 177
            +GQ  +    A    AP A HPCPYV Y
Sbjct: 152 LLGQQGYYTEPA----APTAGHPCPYVTY 176



>AT2G47700.1 | chr2:19552506-19554351 REVERSE LENGTH=359
          Length = 358

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 92/125 (73%), Gaps = 2/125 (1%)

Query: 30  VSCSICLDAVVAAGGERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYAN 89
           VSCSICL++V+   G RS A+LQCGH+FHLDCIGSAFN KG MQCPNCR +EKG WLYAN
Sbjct: 36  VSCSICLESVLD-DGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYAN 94

Query: 90  GS-RPTQDVNMDEWAHDEDLYDVSYSEMPFRFHWCPFGRLAQLPSFFEEGESSPPVTFHD 148
           GS RP  + +M++W  +EDLY +SY EM +R HWCPFG L+Q  + FEE E +      +
Sbjct: 95  GSTRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQAAASFEELEPATTTYHTE 154

Query: 149 FMGQH 153
           F G H
Sbjct: 155 FHGHH 159



>AT2G15260.1 | chr2:6630528-6634008 FORWARD LENGTH=363
          Length = 362

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 2/101 (1%)

Query: 32  CSICLDAVVAAGG-ERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYANG 90
           CSIC  A+V     +R+   L+C H+FHLDCIGSA+NAKG M+CPNCR IE G+W +++G
Sbjct: 123 CSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCRNIEPGHWQFSDG 182

Query: 91  SRPTQDVNMDEWAHDEDLYD-VSYSEMPFRFHWCPFGRLAQ 130
           +    +  +     +E+  D  S+S+M  +   CPFG L Q
Sbjct: 183 THFNPNGMIANNEEEEEDNDPGSFSQMIVKSEVCPFGCLGQ 223



>AT4G13490.1 | chr4:7839137-7840284 REVERSE LENGTH=227
          Length = 226

 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 43/57 (75%)

Query: 32 CSICLDAVVAAGGERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYA 88
          C++CL+ +     ER+  +L+C H+FHLDC+GS+FN K  M+CP CR+IEKG WL+A
Sbjct: 22 CAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQIEKGKWLFA 78



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.134    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,716,531
Number of extensions: 429120
Number of successful extensions: 1200
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1204
Number of HSP's successfully gapped: 4
Length of query: 436
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 334
Effective length of database: 8,310,137
Effective search space: 2775585758
Effective search space used: 2775585758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)