BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0137100 Os05g0137100|AK110841
(86 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297 108 6e-25
AT4G18050.1 | chr4:10022205-10027280 FORWARD LENGTH=1237 105 7e-24
AT5G46540.1 | chr5:18877192-18882347 REVERSE LENGTH=1249 99 4e-22
AT2G47000.1 | chr2:19310008-19314750 REVERSE LENGTH=1287 95 9e-21
AT4G01830.1 | chr4:785683-790447 REVERSE LENGTH=1231 83 2e-17
AT1G02530.1 | chr1:529836-534542 FORWARD LENGTH=1274 79 6e-16
AT1G02520.1 | chr1:524134-528745 FORWARD LENGTH=1279 79 6e-16
AT4G01820.1 | chr4:780734-785329 REVERSE LENGTH=1230 78 7e-16
AT1G27940.1 | chr1:9733597-9738129 REVERSE LENGTH=1246 65 7e-12
AT1G28010.1 | chr1:9763436-9767917 FORWARD LENGTH=1248 61 1e-10
AT2G36910.1 | chr2:15502162-15507050 FORWARD LENGTH=1287 57 2e-09
AT1G10680.1 | chr1:3538470-3543782 REVERSE LENGTH=1228 53 3e-08
AT4G25960.1 | chr4:13177438-13183425 FORWARD LENGTH=1274 50 2e-07
>AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297
Length = 1296
Score = 108 bits (270), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 66/80 (82%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA++ Y++ L AY +GV EG + G+G+GT+ +++FC Y+L +WYG K+ILE
Sbjct: 275 VASFTGEKQAISNYNKHLVSAYRAGVFEGASTGLGLGTLNIVIFCTYALAVWYGGKMILE 334
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
KGYTG QV+ +IFAVLTGS+
Sbjct: 335 KGYTGGQVLIIIFAVLTGSM 354
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASF E++ + Y + + +G+R+G+ +G+G G +LF Y+ + GA+L+ +
Sbjct: 924 VASFCAEEKVMKMYKKKCEGPMRTGIRQGIVSGIGFGVSFFVLFSSYAASFYAGARLVDD 983
Query: 67 KGYTGAQVMNVIFAV 81
T V V FA+
Sbjct: 984 GKTTFDSVFRVFFAL 998
>AT4G18050.1 | chr4:10022205-10027280 FORWARD LENGTH=1237
Length = 1236
Score = 105 bits (261), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 62/80 (77%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +FTGEKQA KY L+ AY + V++GL +G G+GT++ ++FC Y L +WYGAKLI+E
Sbjct: 227 VVAFTGEKQATEKYESKLEIAYKTVVQQGLISGFGLGTMLAVIFCSYGLAVWYGAKLIME 286
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
KGY G QV+NVIFAVLTG +
Sbjct: 287 KGYNGGQVINVIFAVLTGGM 306
>AT5G46540.1 | chr5:18877192-18882347 REVERSE LENGTH=1249
Length = 1248
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 63/80 (78%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +FTGEKQ++ KY + L+ AY S V++GL +G+G+G +MV+++C Y IWYGA+ I+E
Sbjct: 229 VVAFTGEKQSMGKYEKKLEIAYKSMVKQGLYSGLGIGIMMVVVYCTYGFAIWYGARQIIE 288
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
KGYTG QVMNVI ++LTG +
Sbjct: 289 KGYTGGQVMNVITSILTGGM 308
>AT2G47000.1 | chr2:19310008-19314750 REVERSE LENGTH=1287
Length = 1286
Score = 94.7 bits (234), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 66/80 (82%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA++ Y++ L AY +GV EG + G+G+GT+ +++FC Y+L +WYG KLIL+
Sbjct: 256 VASFTGEKQAISNYNKHLVTAYKAGVIEGGSTGLGLGTLFLVVFCSYALAVWYGGKLILD 315
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
KGYTG QV+N+I AVLTGS+
Sbjct: 316 KGYTGGQVLNIIIAVLTGSM 335
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASF E + + YS+ + +G+R+G+ +G+G G +LF Y+ + GA+L+ +
Sbjct: 914 VASFCAEDKVMNMYSKKCEGPMKNGIRQGIVSGIGFGFSFFVLFSSYAASFYVGARLVDD 973
Query: 67 KGYTGAQVMNVIFAV 81
T V V FA+
Sbjct: 974 GKTTFDSVFRVFFAL 988
>AT4G01830.1 | chr4:785683-790447 REVERSE LENGTH=1231
Length = 1230
Score = 83.2 bits (204), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA++ Y + AY S V++G G+G+G + ++ F Y+LG W+G ++IL
Sbjct: 225 VASFTGEKQAMSSYKELINLAYKSNVKQGFVTGLGLGVMFLVFFSTYALGTWFGGEMILR 284
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
KGYTG V+NV+ V++ S+
Sbjct: 285 KGYTGGAVINVMVTVVSSSI 304
>AT1G02530.1 | chr1:529836-534542 FORWARD LENGTH=1274
Length = 1273
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA+ Y + + AY S +++G + G+G+G ++ + F Y+L IW+G K+ILE
Sbjct: 240 VASFTGEKQAINSYKKYITSAYKSSIQQGFSTGLGLGVMIYVFFSSYALAIWFGGKMILE 299
Query: 67 KGYTG 71
KGYTG
Sbjct: 300 KGYTG 304
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASF E++ + Y++ + GV++G +G+G G +LFC Y+ + A+L+ +
Sbjct: 899 VASFCAEEKVMQMYNKQCEGPIKDGVKQGFISGLGFGFSFFILFCVYATSFYAAARLVED 958
Query: 67 KGYTGAQVMNVIFAV 81
T V V FA+
Sbjct: 959 GKTTFIDVFQVFFAL 973
>AT1G02520.1 | chr1:524134-528745 FORWARD LENGTH=1279
Length = 1278
Score = 78.6 bits (192), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA+ Y + + AY S +++G + G+G+G + + F Y+L IW+G K+ILE
Sbjct: 253 VASFTGEKQAINSYKKFITSAYKSSIQQGFSTGLGLGVMFFVFFSSYALAIWFGGKMILE 312
Query: 67 KGYTG 71
KGYTG
Sbjct: 313 KGYTG 317
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASF E++ + Y + + G+++G +G+G G +LFC Y+ + GA+L+ +
Sbjct: 904 VASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGFSFFILFCVYATSFYAGARLVED 963
Query: 67 KGYTGAQVMNVIFAV 81
T V V FA+
Sbjct: 964 GKTTFNNVFQVFFAL 978
>AT4G01820.1 | chr4:780734-785329 REVERSE LENGTH=1230
Length = 1229
Score = 78.2 bits (191), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VASFTGEKQA+ Y + AY + V++G + G+G+G V + FC Y+L IW+G ++IL+
Sbjct: 220 VASFTGEKQAMKSYREFINLAYRASVKQGFSMGLGLGVVFFVFFCSYALAIWFGGEMILK 279
Query: 67 KGYTGAQ 73
KGYTG +
Sbjct: 280 KGYTGGE 286
>AT1G27940.1 | chr1:9733597-9738129 REVERSE LENGTH=1246
Length = 1245
Score = 65.1 bits (157), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +F GE++AV YS SLK+A G R GLA G+G+G LLFC ++L +WY + L+
Sbjct: 243 VYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRH 302
Query: 67 KGYTGAQ----VMNVIFA 80
GA+ ++NVIF+
Sbjct: 303 GKTNGAKAFTTILNVIFS 320
>AT1G28010.1 | chr1:9763436-9767917 FORWARD LENGTH=1248
Length = 1247
Score = 60.8 bits (146), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +F GE++AV YS SLK+A R GLA G+G+G LLFC ++L WY + L+
Sbjct: 244 VYAFVGEEKAVKSYSNSLKKALKLSKRSGLAKGLGVGLTYSLLFCAWALLFWYASLLVRH 303
Query: 67 KGYTGAQ----VMNVIFA 80
GA+ ++NVI++
Sbjct: 304 GKTNGAKAFTTILNVIYS 321
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLI 64
VA+F+ EKQ +++ L + S + G +G G G L FC Y+LG+WY + LI
Sbjct: 878 VAAFSAEKQISEQFTCELSKPTKSALLRGHISGFGYGLSQCLAFCSYALGLWYISVLI 935
>AT2G36910.1 | chr2:15502162-15507050 FORWARD LENGTH=1287
Length = 1286
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +F GE +A YS +LK A G + GLA G+G+G ++FC Y+L +WYG L+
Sbjct: 240 VMAFVGESRASQAYSSALKIAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRH 299
Query: 67 KGYTGAQVMNVIFAVLTGSL 86
G + +FAV+ G L
Sbjct: 300 HLTNGGLAIATMFAVMIGGL 319
>AT1G10680.1 | chr1:3538470-3543782 REVERSE LENGTH=1228
Length = 1227
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
V +FTGE++AV+ Y +L+ Y+ G + GLA G+G+G++ +LF ++L IW+ + +++
Sbjct: 237 VQAFTGEEKAVSSYQGALRNTYNYGRKAGLAKGLGLGSLHFVLFLSWALLIWFTS-IVVH 295
Query: 67 KGYTG-----AQVMNVIFA 80
KG ++NV+ A
Sbjct: 296 KGIANGGESFTTMLNVVIA 314
>AT4G25960.1 | chr4:13177438-13183425 FORWARD LENGTH=1274
Length = 1273
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGA----K 62
V +FTGE++AV Y +L+ Y G + GL G+G+G++ +LF ++L +W+ + K
Sbjct: 273 VQAFTGEERAVRLYREALENTYKYGRKAGLTKGLGLGSMHCVLFLSWALLVWFTSVVVHK 332
Query: 63 LILEKGYTGAQVMNVIFA 80
I + G + ++NV+ A
Sbjct: 333 DIADGGKSFTTMLNVVIA 350
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 7 VASFTGEKQAVAKYSRSLKRAYSSGVREGLAAGVGMGTVMVLLFCGYSLGIWYGAKLILE 66
VA+F E++ + YSR L S R G AG+ G +F Y L +WYG+ L ++
Sbjct: 904 VAAFCAEEKILELYSRELLEPSKSSFRRGQIAGLFYGVSQFFIFSSYGLALWYGSTL-MD 962
Query: 67 KGYTGAQVMNVIFAVL 82
KG G + + F VL
Sbjct: 963 KGLAGFKSVMKTFMVL 978
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,636,739
Number of extensions: 52948
Number of successful extensions: 199
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 198
Number of HSP's successfully gapped: 29
Length of query: 86
Length of database: 11,106,569
Length adjustment: 57
Effective length of query: 29
Effective length of database: 9,543,857
Effective search space: 276771853
Effective search space used: 276771853
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)