BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0129700 Os05g0129700|AK111878
(311 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330 233 1e-61
AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311 224 3e-59
AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399 216 1e-56
AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383 196 1e-50
AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432 119 2e-27
AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394 116 1e-26
AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384 116 2e-26
AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292 109 2e-24
AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440 60 1e-09
AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576 60 1e-09
AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539 60 2e-09
AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291 59 3e-09
AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585 59 4e-09
AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681 58 8e-09
AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525 57 1e-08
AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483 57 1e-08
AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533 57 1e-08
AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612 55 3e-08
AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740 55 4e-08
AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628 55 5e-08
AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474 52 4e-07
>AT1G23380.2 | chr1:8297499-8302492 REVERSE LENGTH=330
Length = 329
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/239 (49%), Positives = 150/239 (62%), Gaps = 5/239 (2%)
Query: 54 LMKAQIAGHPSYPSLLSAYIECRK--VGAPPEVTXXXXXXXXXXXXXXXXXXXXXXXXLD 111
++KA+IA HPSYP LL AYI+C+K VGAPPE+ D
Sbjct: 84 VIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGAD 143
Query: 112 PELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSS 171
PELDEFMETYC +L +YK +L RPFDEA FL I QL +LC G S++ V SS
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISS 203
Query: 172 EDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLXXXXXXXXXXDAR 231
++E GD + A+ G++ R D +LK+ LL+K+ +S L+ EF +AR
Sbjct: 204 DEELSGGDHEVAEDGRQ---RCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREAR 260
Query: 232 SALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALME 290
AL+DWWN HY+WPYPTE DK+ LA TGLD KQINNWFINQRKRHWKPSE+M FA+M+
Sbjct: 261 QALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMD 319
>AT1G70510.1 | chr1:26576635-26582145 FORWARD LENGTH=311
Length = 310
Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/237 (48%), Positives = 145/237 (61%), Gaps = 3/237 (1%)
Query: 54 LMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTXXXXXXXXXXXXXXXXXXXXXXXXLDPE 113
++K++IA HP YP LL YI+C+KVGAP E+ DPE
Sbjct: 68 VIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPE 127
Query: 114 LDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSED 173
LDEFMETYC +L +YK +L RPFDEA +F+ I QL +LC G T SD+ SS++
Sbjct: 128 LDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSDDGAVSSDE 187
Query: 174 EPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLXXXXXXXXXXDARSA 233
E D AAD Q+ S+ D +LK+ LL+K+ +S L+ EF +AR A
Sbjct: 188 ELREDDDIAADDSQQRSN---DRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQA 244
Query: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALME 290
L+DWWN H +WPYPTE DK+ LA TGLD KQINNWFINQRKRHWKPSE+M F +M+
Sbjct: 245 LLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301
>AT4G08150.1 | chr4:5147969-5150610 REVERSE LENGTH=399
Length = 398
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 148/263 (56%), Gaps = 7/263 (2%)
Query: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTXXXXXXXXXXXXXXXXXX-XXXXXXL 110
E MKA+I HP Y +LL AY++C+K+GAPP+V
Sbjct: 131 VEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSR 190
Query: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSD---EM 167
DPELD+FME YC +L +Y+EELTRP EA F+ I +QL+ LC +N D +
Sbjct: 191 DPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDN 250
Query: 168 VGSSEDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLXXXXXXXXX 227
+GSS++E + + E R D ELK LLKKYSG LS L+ E
Sbjct: 251 MGSSDEEQENNSGGETELP-EIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLP 309
Query: 228 XDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFA 287
+AR L+ WW HY+WPYP+E +KV LA TGLD KQINNWFINQRKRHWKPSEDM+F
Sbjct: 310 KEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFM 369
Query: 288 LMEGVXXXXXXXXXLYFDTGTIG 310
+M+G+ LY D +G
Sbjct: 370 VMDGL--QHPHHAALYMDGHYMG 390
>AT1G62360.1 | chr1:23058796-23061722 REVERSE LENGTH=383
Length = 382
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 137/247 (55%), Gaps = 19/247 (7%)
Query: 55 MKAQIAGHPSYPSLLSAYIECRKVGAPPEVTXXXXXXXXXXXXXXXXXXXXXXXXLDPEL 114
+KA+I HP Y LL+AY+ C+KVGAPPEV DP L
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGL 180
Query: 115 DEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQL--------ASLCGGAPPPTDNSDE 166
D+FME YC +L +Y++EL++PF EA FL + Q +S G D ++
Sbjct: 181 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNN 240
Query: 167 MVGSSEDEPCSGDADAADFGQEHSSRLA-DHELKEMLLKKYSGCLSRLRSEFLXXXXXXX 225
GSSE+E D E A D ELK LL+KYSG L L+ EF+
Sbjct: 241 --GSSEEE--------VDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 290
Query: 226 XXXDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMR 285
+AR L+DWW+ HY+WPYP+E+ K+ LA TGLD KQINNWFINQRKRHWKPSEDM+
Sbjct: 291 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 350
Query: 286 FALMEGV 292
F +M+
Sbjct: 351 FVVMDAT 357
>AT5G25220.1 | chr5:8736208-8738115 FORWARD LENGTH=432
Length = 431
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEV-TXXXXXXXXXXXXXXXXXXXXXXXXL 110
KA+I HP Y LLSA++ C ++ P P +
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGD 219
Query: 111 DPELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPP------ 160
D ELD+FM Y +L +KE+L + EA I L SL G +P
Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATM 279
Query: 161 TDNSDEMVGSSEDEPCSGDADAADFG----QEHSSRLAD---HELKEMLLKKYSGCLSRL 213
+D+ DE V S+ G D FG E L + ELK L + Y + +
Sbjct: 280 SDDEDEQV-ESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI 338
Query: 214 RSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQ 273
R E L D S L WW +H +WPYPTEEDK RL TGL KQINNWFINQ
Sbjct: 339 REEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQ 398
Query: 274 RKRHW 278
RKR+W
Sbjct: 399 RKRNW 403
>AT5G11060.1 | chr5:3510408-3512967 FORWARD LENGTH=394
Length = 393
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 104/246 (42%), Gaps = 25/246 (10%)
Query: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEV-TXXXXXXXXXXXXXXXXXXXXXXXXL 110
KA+I HP Y LLSA++ C ++ P P +
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGD 183
Query: 111 DPELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDE 166
D ELD FM Y +L +KE+L + EA I L S G +P + +
Sbjct: 184 DKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSP--GEGTGA 241
Query: 167 MVGSSEDEPCSGDA-------DAADFG----QEHSSRLAD---HELKEMLLKKYSGCLSR 212
+ EDE DA D FG E L + ELK L + Y +
Sbjct: 242 TMSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVD 301
Query: 213 LRSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFIN 272
+R E L D S L WW +H +WPYPTEEDK RL TGL KQINNWFIN
Sbjct: 302 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 361
Query: 273 QRKRHW 278
QRKR+W
Sbjct: 362 QRKRNW 367
>AT4G32040.1 | chr4:15494127-15496009 FORWARD LENGTH=384
Length = 383
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 106/244 (43%), Gaps = 21/244 (8%)
Query: 56 KAQIAGHPSYPSLLSAYIECRKVGAPPEVTXXXXXXXXXXXXXXXXXXXXXXXXLDPELD 115
KA I HP Y LL+A++ C +V P + + ELD
Sbjct: 119 KAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLGVVVDNKELD 178
Query: 116 EFMETYCRVLERYKEELTRPF----DEAASFLTGIHTQLASLCGGAPPPT------DNSD 165
FM Y +L +KE+L EA + I L SL G +P + D+ D
Sbjct: 179 HFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDED 238
Query: 166 EMVGSSEDEPCSGDADAAD----FG----QEHSSRLADH---ELKEMLLKKYSGCLSRLR 214
+ SE G D +D FG E L + ELK L + + + +R
Sbjct: 239 DNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIR 298
Query: 215 SEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQR 274
E + D S L +WW TH +WPYPTEEDK +L TGL KQINNWFINQR
Sbjct: 299 EEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQR 358
Query: 275 KRHW 278
KR+W
Sbjct: 359 KRNW 362
>AT1G62990.1 | chr1:23337468-23340348 FORWARD LENGTH=292
Length = 291
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 106/247 (42%), Gaps = 23/247 (9%)
Query: 55 MKAQIAGHPSYPSLLSAYIECRKVGAP-PEVTXXXXXXXXXXXXXXXXXXXXXXXXLDP- 112
+K +IA HP Y LL+A++ C +V P ++ D
Sbjct: 29 LKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRH 88
Query: 113 ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-------GAPPPT 161
ELD F+ Y VL +KE+L + EA I L SL G GA
Sbjct: 89 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSE 148
Query: 162 DNSDEMVGSSEDEPC---SGDADAADFG----QEHSSRLADHELKEMLLKKYSGCLSRL- 213
D D + S D SG D FG E L + +E+ L+ G SR+
Sbjct: 149 DEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRIE 208
Query: 214 --RSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFI 271
R E + D + L +WW H +WPYPTE+DK +L TGL KQINNWFI
Sbjct: 209 DVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFI 268
Query: 272 NQRKRHW 278
NQRKR+W
Sbjct: 269 NQRKRNW 275
>AT2G27220.2 | chr2:11637306-11639507 REVERSE LENGTH=440
Length = 439
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 31/51 (60%)
Query: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
A S L W H+ PYP + DKV LA TGL Q++NWFIN R R WKP
Sbjct: 247 AVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKP 297
>AT5G02030.1 | chr5:395754-398872 FORWARD LENGTH=576
Length = 575
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
A + L W H+ PYPT+ DK+ LA TGL Q++NWFIN R R WKP
Sbjct: 359 AVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKP 409
>AT1G19700.1 | chr1:6809958-6811854 REVERSE LENGTH=539
Length = 538
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 229 DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
++ S L W H+ PYP E +K+ LA TGL Q+ NWFIN R R WKP
Sbjct: 361 NSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKP 412
>AT1G75430.1 | chr1:28308121-28309517 REVERSE LENGTH=291
Length = 290
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 232 SALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
+ L W H+ PYP E +K+ LA+ TGL Q++NWFIN R R WKP
Sbjct: 215 AILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWKP 263
>AT2G27990.1 | chr2:11921540-11923902 REVERSE LENGTH=585
Length = 584
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
A + L W H+ PYPT+ DK LA TGL Q++NWFIN R R WKP
Sbjct: 435 AVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQVSNWFINARVRLWKP 485
>AT2G35940.1 | chr2:15089171-15091699 REVERSE LENGTH=681
Length = 680
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 30/51 (58%)
Query: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
A S L W H+ PYP + DK LA TGL Q++NWFIN R R WKP
Sbjct: 396 AVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKP 446
>AT1G75410.1 | chr1:28300095-28301890 REVERSE LENGTH=525
Length = 524
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 229 DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
++ S L W H+ PYP E +K+ L+ TGL Q+ NWFIN R R WKP
Sbjct: 356 NSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLWKP 407
>AT2G16400.1 | chr2:7101490-7103200 REVERSE LENGTH=483
Length = 482
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 233 ALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
L W H+ PYP + DK+ LA TGL Q++NWFIN R R WKP
Sbjct: 299 VLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKP 346
>AT4G34610.1 | chr4:16530546-16532498 REVERSE LENGTH=533
Length = 532
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
L W H+ PYP + DK+ LA TGL Q++NWFIN R R WKP
Sbjct: 329 LRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKP 375
>AT5G41410.1 | chr5:16580424-16583770 FORWARD LENGTH=612
Length = 611
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 230 ARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
A + L W H+ PYP++ DK LA TGL Q++NWFIN R R WKP
Sbjct: 402 AVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKP 452
>AT4G36870.1 | chr4:17369423-17373723 FORWARD LENGTH=740
Length = 739
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
L W H+ PYP++ DK LA TGL Q++NWFIN R R WKP
Sbjct: 513 LRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 559
>AT2G23760.1 | chr2:10107951-10112736 REVERSE LENGTH=628
Length = 627
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKP 280
L W H+ PYP++ DK LA TGL Q++NWFIN R R WKP
Sbjct: 439 LRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 485
>AT4G32980.1 | chr4:15914865-15916873 REVERSE LENGTH=474
Length = 473
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 232 SALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALME 290
S L +W ++ PYP + +K LA +GL Q++NWFIN R R WKP + +A M
Sbjct: 385 SVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMIEEMYAEMN 443
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,307,087
Number of extensions: 189368
Number of successful extensions: 563
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 550
Number of HSP's successfully gapped: 21
Length of query: 311
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 213
Effective length of database: 8,419,801
Effective search space: 1793417613
Effective search space used: 1793417613
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)