BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0128200 Os05g0128200|AK099898
(380 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58620.1 | chr5:23693959-23695782 FORWARD LENGTH=608 272 2e-73
AT2G41900.1 | chr2:17491352-17493502 FORWARD LENGTH=717 260 7e-70
AT2G40140.1 | chr2:16772537-16774330 FORWARD LENGTH=598 258 4e-69
AT3G55980.1 | chr3:20776857-20778599 FORWARD LENGTH=581 251 5e-67
AT5G12850.1 | chr5:4057068-4059188 FORWARD LENGTH=707 234 6e-62
AT4G29190.1 | chr4:14392233-14393303 REVERSE LENGTH=357 180 9e-46
AT2G19810.1 | chr2:8550419-8551498 FORWARD LENGTH=360 176 2e-44
AT2G25900.1 | chr2:11041817-11042764 FORWARD LENGTH=316 172 3e-43
AT1G03790.1 | chr1:954589-955770 FORWARD LENGTH=394 168 5e-42
AT5G07500.1 | chr5:2372716-2373453 FORWARD LENGTH=246 161 6e-40
AT5G44260.1 | chr5:17829974-17831119 REVERSE LENGTH=382 158 5e-39
>AT5G58620.1 | chr5:23693959-23695782 FORWARD LENGTH=608
Length = 607
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/272 (50%), Positives = 166/272 (61%), Gaps = 13/272 (4%)
Query: 54 AGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVXXXXXXXXXXSETDGATPLHM 113
+GLWYG G ++G E RT M+AAL+GS V+ Y++ +DGAT LH
Sbjct: 41 SGLWYGRRL-GSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHC 99
Query: 114 XXXXXXXXXXXXXXXXXXXXXSVDALSASGLRAGDLL-----PRATAAEKAIRLLLXXXX 168
+ D+ A G + GD++ P +A K + LL
Sbjct: 100 AVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVFSARMKVLERLLKGND 159
Query: 169 XXXXXXXXXXXXXXXXXXXQ------EAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKP 222
+ +KEYP D TLPD+K+G++ TDEFRMY+FK+KP
Sbjct: 160 DLNEVNGQEESEPEVEVEVEVSPPRGSERKEYPVDPTLPDIKNGVYGTDEFRMYAFKIKP 219
Query: 223 CSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFEC 282
CSRAYSHDWTECPFVHPGENARRRDPR+Y YSCVPCPEFRK GSC +GD CEYAHG+FEC
Sbjct: 220 CSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRK-GSCSRGDTCEYAHGIFEC 278
Query: 283 WLHPAQYRTRLCKDEVGCARRICFFAHKPDEL 314
WLHPAQYRTRLCKDE C+RR+CFFAHKP+EL
Sbjct: 279 WLHPAQYRTRLCKDETNCSRRVCFFAHKPEEL 310
>AT2G41900.1 | chr2:17491352-17493502 FORWARD LENGTH=717
Length = 716
Score = 260 bits (665), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 164/291 (56%), Gaps = 32/291 (10%)
Query: 54 AGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVXXXXXXXXXXSETDGATPLHM 113
AGLWYG G + + RT MVAA YGS V+ +V D T LH
Sbjct: 74 AGLWYG-RQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHC 132
Query: 114 XXXXXXXXXXXXXXXXXXXXXSVDALSASGLRAGDLL---PR----------------AT 154
++ L A G RAGD++ P+ ++
Sbjct: 133 AASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPKLEGVKLMLQELLSADGSS 192
Query: 155 AAEKAIRLLLXXXXXXXX-----------XXXXXXXXXXXXXXXQEAKKEYPPDLTLPDL 203
AE+ +R++ E KKEYP D +LPD+
Sbjct: 193 TAERNLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGSPFKLKSTEFKKEYPVDPSLPDI 252
Query: 204 KSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRK 263
K+ +++TDEFRMYSFKV+PCSRAYSHDWTECPFVHPGENARRRDPR++ YSCVPCP+FRK
Sbjct: 253 KNSIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRK 312
Query: 264 GGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDEL 314
G+CR+GD CEYAHGVFECWLHPAQYRTRLCKD GCARR+CFFAH P+EL
Sbjct: 313 -GACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEEL 362
>AT2G40140.1 | chr2:16772537-16774330 FORWARD LENGTH=598
Length = 597
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/266 (48%), Positives = 159/266 (59%), Gaps = 15/266 (5%)
Query: 54 AGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVXXXXXXXXXXSETDGATPLHM 113
+G WY G ++G E RT MVAA+YGS VL Y++ + T LH
Sbjct: 60 SGFWYCRRV-GSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHC 118
Query: 114 XXXXXXXXXXXXXXXXXXXXXSVDALSASGLRAGDLLPRAT-----AAEKAIRLLLXXXX 168
S + + A+G + DLL + + + KA+ +LL
Sbjct: 119 AVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIH 178
Query: 169 XXXXXXXXXXXXXXXXXXXQEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYS 228
+ +YP D +LPD+ G++ TD+FRM+SFKVKPCSRAYS
Sbjct: 179 GSVMEEEEEEL--------KSVVTKYPADASLPDINEGVYGTDDFRMFSFKVKPCSRAYS 230
Query: 229 HDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQ 288
HDWTECPFVHPGENARRRDPR+Y Y+CVPCPEFRK GSC KGD+CEYAHGVFE WLHPAQ
Sbjct: 231 HDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRK-GSCPKGDSCEYAHGVFESWLHPAQ 289
Query: 289 YRTRLCKDEVGCARRICFFAHKPDEL 314
YRTRLCKDE GCARR+CFFAH+ DEL
Sbjct: 290 YRTRLCKDETGCARRVCFFAHRRDEL 315
>AT3G55980.1 | chr3:20776857-20778599 FORWARD LENGTH=581
Length = 580
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 158/263 (60%), Gaps = 8/263 (3%)
Query: 54 AGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVXXXXXXXXXXSETDGATPLHM 113
+GLWY G ++G+E RT MVAA+YGS VL ++V + TPLH
Sbjct: 56 SGLWYCRRV-GSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHC 114
Query: 114 XXXXXXXXXXXXXXXXXXXXXSVDALSASGLRAGDLLPRATAAEKAIRLLLXXXXXXXXX 173
V+++ A+G + D+ R + + R
Sbjct: 115 AVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPR----RKAVELLL 170
Query: 174 XXXXXXXXXXXXXXQEAK--KEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDW 231
+E K +YP D +LPD+ G++ +DEFRMYSFKVKPCSRAYSHDW
Sbjct: 171 RGGGVGGLIDEAVEEEIKIVSKYPADASLPDINEGVYGSDEFRMYSFKVKPCSRAYSHDW 230
Query: 232 TECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRT 291
TEC FVHPGENARRRDPR+Y Y+CVPCPEFRK GSC KGD+CEYAHGVFE WLHPAQY+T
Sbjct: 231 TECAFVHPGENARRRDPRKYPYTCVPCPEFRK-GSCPKGDSCEYAHGVFESWLHPAQYKT 289
Query: 292 RLCKDEVGCARRICFFAHKPDEL 314
RLCKDE GCAR++CFFAHK +E+
Sbjct: 290 RLCKDETGCARKVCFFAHKREEM 312
>AT5G12850.1 | chr5:4057068-4059188 FORWARD LENGTH=707
Length = 706
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 114/124 (91%), Gaps = 1/124 (0%)
Query: 191 KKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRR 250
KKEYP D +LPD+KSG++STDEFRM+SFK++PCSRAYSHDWTECPF HPGENARRRDPR+
Sbjct: 236 KKEYPIDPSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRK 295
Query: 251 YSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHK 310
+ Y+CVPCP+F+K GSC++GD CEYAHGVFECWLHPAQYRTRLCKD +GC RR+CFFAH
Sbjct: 296 FHYTCVPCPDFKK-GSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHA 354
Query: 311 PDEL 314
+EL
Sbjct: 355 NEEL 358
>AT4G29190.1 | chr4:14392233-14393303 REVERSE LENGTH=357
Length = 356
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Query: 188 QEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRD 247
E E PDL PD +S D FRMY FKV+ C+R SHDWTECP+ HPGE ARRRD
Sbjct: 55 NEPDPESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRD 114
Query: 248 PRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFF 307
PR+Y YS CP+FRKGG C+KGD+CE+AHGVFECWLHPA+YRT+ CKD C R+ICFF
Sbjct: 115 PRKYHYSGTACPDFRKGG-CKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFF 173
Query: 308 AHKPDEL 314
AH PD+L
Sbjct: 174 AHSPDQL 180
>AT2G19810.1 | chr2:8550419-8551498 FORWARD LENGTH=360
Length = 359
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Query: 188 QEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRD 247
E + PDL+ PD ++ D FRMY FKV+ C+R SHDWTECP+ HPGE ARRRD
Sbjct: 54 NEPDPDSDPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRD 113
Query: 248 PRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFF 307
PR++ YS CPEFRK G C++GDACE++HGVFECWLHPA+YRT+ CKD C RR+CFF
Sbjct: 114 PRKFHYSGTACPEFRK-GCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFF 172
Query: 308 AHKPDEL 314
AH PD++
Sbjct: 173 AHSPDQI 179
>AT2G25900.1 | chr2:11041817-11042764 FORWARD LENGTH=316
Length = 315
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
Query: 208 FSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSC 267
FS+DEFR+Y FK++ C+R SHDWTECPF HPGE ARRRDPR++ YS CPEFRK GSC
Sbjct: 86 FSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRK-GSC 144
Query: 268 RKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDEL 314
R+GD+CE++HGVFECWLHP++YRT+ CKD C RRICFFAH ++L
Sbjct: 145 RRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQL 191
>AT1G03790.1 | chr1:954589-955770 FORWARD LENGTH=394
Length = 393
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 208 FSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSC 267
+++D FRM+ FK++ C+R+ SHDWT+CPF HPGE ARRRDPRR+ YS CPEFR+GG C
Sbjct: 78 YASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDC 137
Query: 268 RKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDEL 314
+GD CE+AHGVFECWLHP +YRT CKD C R++CFFAH P +L
Sbjct: 138 SRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQL 184
>AT5G07500.1 | chr5:2372716-2373453 FORWARD LENGTH=246
Length = 245
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Query: 194 YPPDLTLPDLKSGLFSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSY 253
Y D ++P++ ++ +DEFRMY++K+K C R SHDWTECP+ H GE A RRDPRRY+Y
Sbjct: 34 YEIDPSIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTY 93
Query: 254 SCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDE 313
V CP FR G+C +GD+CE+AHGVFE WLHPA+YRTR C C R++CFFAH P++
Sbjct: 94 CAVACPAFRN-GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQ 152
Query: 314 L 314
L
Sbjct: 153 L 153
>AT5G44260.1 | chr5:17829974-17831119 REVERSE LENGTH=382
Length = 381
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 82/107 (76%)
Query: 208 FSTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSC 267
++ D FRMY FK++ C+R+ SHDWT+CPF HPGE ARRRDPRR+ Y+ CPEF + G C
Sbjct: 56 YAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDC 115
Query: 268 RKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDEL 314
+GD C +AHGVFECWLHP++YRT CKD C R++CFFAH P +L
Sbjct: 116 SRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQL 162
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,777,887
Number of extensions: 187023
Number of successful extensions: 439
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 12
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)