BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0108400 Os05g0108400|AK119954
(306 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12690.1 | chr4:7480896-7481753 FORWARD LENGTH=286 164 8e-41
AT2G04220.1 | chr2:1445401-1446324 FORWARD LENGTH=308 162 3e-40
AT5G48270.1 | chr5:19564744-19565712 REVERSE LENGTH=323 157 7e-39
AT5G28150.1 | chr5:10135826-10136695 FORWARD LENGTH=290 145 2e-35
AT3G04860.1 | chr3:1339349-1340218 REVERSE LENGTH=290 145 4e-35
AT3G13229.1 | chr3:4268566-4269435 REVERSE LENGTH=290 111 6e-25
AT5G11000.1 | chr5:3479166-3480335 REVERSE LENGTH=390 90 2e-18
AT2G25200.1 | chr2:10736580-10737644 REVERSE LENGTH=355 88 7e-18
AT2G27770.1 | chr2:11833089-11834051 REVERSE LENGTH=321 87 2e-17
AT2G36470.1 | chr2:15299385-15300368 REVERSE LENGTH=328 61 8e-10
>AT4G12690.1 | chr4:7480896-7481753 FORWARD LENGTH=286
Length = 285
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 143/284 (50%), Gaps = 15/284 (5%)
Query: 25 EIPVNGHKPGRAVTASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDG-ASAECRVD 83
E PV +K ++ +Y+A + G R + V WS+++++HS V VT V G + C+VD
Sbjct: 15 EDPVT-YKTAQSSVTCIYQAHMVGFWRNVRVLWSKNLMNHSLTVMVTSVQGDMNYCCKVD 73
Query: 84 LRPWQFWRRAGSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXX 143
L+PW FW + G + E+ G V V WD R A+F G PEP S
Sbjct: 74 LKPWHFWYKKGYKSFEVEGNQ---VDVYWDFRSAKFNGG-PEPSSDFYVALVSEEEVVLL 129
Query: 144 XXDMRKDXXXXXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXX 203
D +K E+VFGK+ F+ +A+FHD+ H+I +E
Sbjct: 130 LGDHKKKAFKRTKSRPSLVDAALFYKK--ENVFGKKIFSTRAKFHDRKREHEIVVESSTG 187
Query: 204 XXXXDADMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSA-GMRP 262
+ EM I++DG VQV++LQWKFRGNQ+V + V+++WDV+DWLFS G
Sbjct: 188 A----KEPEMWISVDGIVLVQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLFSTPGTGH 243
Query: 263 ALFIFRPIVLXXXXXXXXXMLLDGSPPPPPATGFCLYLYAWKLD 306
LFIF+P + ++ FCL+LYAWKL+
Sbjct: 244 GLFIFKPESGESETSNETKNCS--ASSSSSSSEFCLFLYAWKLE 285
>AT2G04220.1 | chr2:1445401-1446324 FORWARD LENGTH=308
Length = 307
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 25 EIPVNGHKPGRAVTASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDG-ASAECRVD 83
E PV +K ++ +Y+A I+G R +TV WS+++++HS V VT V+G + C+VD
Sbjct: 19 EDPVT-YKTAQSTVTCIYQAHISGFWRNVTVLWSKNLMNHSLMVMVTNVEGDMNYCCKVD 77
Query: 84 LRPWQFWRRAGSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXX 143
L+PW FW + G + ++ G V V WD R A+F + PEP S
Sbjct: 78 LKPWHFWNKKGYKSFDVEGNP---VEVYWDFRSAKFTSS-PEPSSDFYVALVSEEEVVLL 133
Query: 144 XXDMRKDXXXXXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXX 203
D +K E+VFGK+ F +A+F+D+ H+I +E
Sbjct: 134 VGDYKKKAFKRTKSRPALVEAALFYKK--ENVFGKKCFTTRAKFYDRKKEHEIIVE---S 188
Query: 204 XXXXDADMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSA-GMRP 262
+ EM I+IDG +QVK+LQWKFRGNQ+V + V+++WDV+DWLFS G
Sbjct: 189 STSGPKEPEMWISIDGIVLIQVKNLQWKFRGNQTVLVDKQPVQVFWDVYDWLFSMPGTGH 248
Query: 263 ALFIFRP-----------------IVLXXXXXXXXXMLLDGSPPPPPATGFCLYLYAWKL 305
LFIF+P S P PP FCL+L+A+KL
Sbjct: 249 GLFIFKPGTTEDSDMEGSGHGGGGGGESDTSTGSRYYSTKSSNPWPPE--FCLFLHAYKL 306
Query: 306 D 306
+
Sbjct: 307 E 307
>AT5G48270.1 | chr5:19564744-19565712 REVERSE LENGTH=323
Length = 322
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 145/295 (49%), Gaps = 31/295 (10%)
Query: 33 PGRAVTASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDG-ASAECRVDL-RPWQFW 90
P VT Y+A +AG R +TV WS+++++HS V V+ +D + C++DL +PWQFW
Sbjct: 38 PHSTVTCG-YQAHVAGFFRNVTVLWSKNLMNHSLTVMVSSLDNDMNYCCKIDLVKPWQFW 96
Query: 91 RRAGSRRVELAGTAPATVRVMWDLRRARF-GAGLPEPRSXXXXXXXXXXXXXXXXXDMRK 149
+ GS+ ++ G V V WDLR A+ G G PEP S D+++
Sbjct: 97 SKRGSKSFDVEGN---FVEVFWDLRSAKLAGNGSPEPVSDYYVAVVSDEEVVLLLGDLKQ 153
Query: 150 DXXXXXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXXXXXXDA 209
E +FGK+ F+ +ARF +Q H++ +E A
Sbjct: 154 KAYKRTKSRPALVEGFIYFKK--ESIFGKKTFSTRARFDEQRKEHEVVVESSNGA----A 207
Query: 210 DMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAGMRPA---LFI 266
+ EM I++DG V VK+LQWKFRGNQ V R V +Y+DVHDWLF++ A LF+
Sbjct: 208 EPEMWISVDGIVVVNVKNLQWKFRGNQMVMVDRTPVMVYYDVHDWLFASSETAASSGLFL 267
Query: 267 FRPIVLXXXXXXXXXMLLD-----GSPPPP----------PATGFCLYLYAWKLD 306
F+P+ + + GS P P FCL+LYAWKL+
Sbjct: 268 FKPVPVGAMVDESFSDAEEGDSGGGSSPLSRYNSASSGFGPLHDFCLFLYAWKLE 322
>AT5G28150.1 | chr5:10135826-10136695 FORWARD LENGTH=290
Length = 289
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 32 KPGRAVTASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDGASAE--CRVDLRPWQF 89
K + + +Y+ +I G + ++TV+W+++++ S V GVD + + C+V+++PW F
Sbjct: 26 KNAQNLVTCIYQCRIRGRNCLITVTWTKNLMGQSVTV---GVDDSCNQSLCKVEIKPWLF 82
Query: 90 WRRAGSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXXXXDMRK 149
+R GS+ +E + V WDL A+FG+G PE DM+K
Sbjct: 83 TKRKGSKSLE---AYSCNIDVFWDLSSAKFGSG-PEALGGFYVGVVVDKEMVLLLGDMKK 138
Query: 150 DXXXXXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXXXXXXDA 209
+ EHVFGKR FA KA+ G HD+ IEC
Sbjct: 139 EAFKKTNASPSSLGAVFIAKK--EHVFGKRVFATKAQLFADGKFHDLLIECDTNV----T 192
Query: 210 DMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSA-GMRPALFIFR 268
D + + +DG+ +QVK L+WKFRGN ++ ++ VE+ WDVH WLF A+F+FR
Sbjct: 193 DPCLVVRVDGKTLLQVKRLKWKFRGNDTIVVNKMTVEVLWDVHSWLFGLPTTGNAVFMFR 252
Query: 269 PIVLXXXXXXXXXMLLDGSPPPPPATGFCLYLYAWK 304
+ + + GF L LYAWK
Sbjct: 253 T-CQSTEKSLSFSQDVTTTNSKSHSFGFSLILYAWK 287
>AT3G04860.1 | chr3:1339349-1340218 REVERSE LENGTH=290
Length = 289
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 137/298 (45%), Gaps = 25/298 (8%)
Query: 17 PSCD------IAADEIPVNGHKPGRAVTASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSV 70
PSC IA + + + + +YR +I G + ++TV+W+++++ V
Sbjct: 5 PSCSGENGVQIADSSSSSSAGRNAQNLVICIYRCRIRGRTCLITVTWTKNLMGQCVTV-- 62
Query: 71 TGVDGAS--AECRVDLRPWQFWRRAGSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRS 128
GVD + + C+V+++PW F +R GS+ +E + V WDL A+FG+ PEP
Sbjct: 63 -GVDDSCNRSLCKVEIKPWLFTKRKGSKTLE---AYACNIDVFWDLSSAKFGSS-PEPLG 117
Query: 129 XXXXXXXXXXXXXXXXXDMRKDXXXXXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFH 188
DM+K+ EHVFGKR FA KA+F
Sbjct: 118 GFYVGVVVDKEMVLLLGDMKKEAFKKTNAAPSSSLGAVFIAKK-EHVFGKRTFATKAQFS 176
Query: 189 DQGTVHDIAIECXXXXXXXDADMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIY 248
G HD+ IEC +D + + +DG+ +QV+ L WKFRGN ++ +R VE+
Sbjct: 177 GDGKTHDLVIECDTSL----SDPCLIVRVDGKILMQVQRLHWKFRGNDTIIVNRISVEVL 232
Query: 249 WDVHDWLFSAGMRP--ALFIFRPIVLXXXXXXXXXMLLDGSPPPPPATGFCLYLYAWK 304
WDVH W F P A+F+FR + + + GF L LYAWK
Sbjct: 233 WDVHSWFFGLPSSPGNAVFMFRTCQSVEKTWSFTQV---PTSSKSQSFGFSLILYAWK 287
>AT3G13229.1 | chr3:4268566-4269435 REVERSE LENGTH=290
Length = 289
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 17/237 (7%)
Query: 41 VYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVDGASAE----CRVDLRPWQFWRRAGSR 96
+Y +IA + + V+WS+ SHS + + V ++DL FW + G +
Sbjct: 11 IYVVEIAKTPQNVDVTWSKTTSSHSLTIKIENVKDEQQNHHQPVKIDLSGSSFWAKKGLK 70
Query: 97 RVELAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXXXXDMRKDXXXXXX 156
+E GT V V WD R+A+F + PEP S D+R +
Sbjct: 71 SLEANGTR---VDVYWDFRQAKF-SNFPEPSSGFYVSLVSQNATVLTIGDLRNEALKRTK 126
Query: 157 XXXXXXXXXXXXXXXXEHVFGKRRFAAKARFH--DQGTVHDIAIECXXXXXXXDADMEMT 214
EHV GKR F + F + +++ IE +D EM
Sbjct: 127 KNPSATEAALVSKQ--EHVHGKRVFYTRTAFGGGESRRENEVVIETSLSGP---SDPEMW 181
Query: 215 IAIDGEEAVQVKHLQWKFRGNQSVTFSRA-KVEIYWDVHDWLFS-AGMRPALFIFRP 269
I +DG A+++ +L W+FRGN+ VT S +EI+WDVHDWLF +G LF+F+P
Sbjct: 182 ITVDGVPAIRIMNLNWRFRGNEVVTVSDGVSLEIFWDVHDWLFEPSGSSSGLFVFKP 238
>AT5G11000.1 | chr5:3479166-3480335 REVERSE LENGTH=390
Length = 389
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 27/237 (11%)
Query: 43 RAKIAGHSRVLTVSWSRDMLSHS---FAVSVTGVDGASAECRVDLRPWQFWRRAGSRRVE 99
R + GHS L + S+D +HS S ++ ++L FW++ GSR V
Sbjct: 52 RTFLGGHSVNLFLH-SQDYYNHSSPLSFSSADLSLSSAVSFHLNLNTLAFWKKRGSRFV- 109
Query: 100 LAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXXXXDMRKDXXXXXXXXX 159
++V WDL +A+F +G EPRS D K+
Sbjct: 110 -----SPKIQVFWDLSKAKFDSG-SEPRSGFYIAVVVDGEMGLLVGDSVKEAYARAKSAK 163
Query: 160 XXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXXXXXXDADMEMTIAIDG 219
EHVFG R F KARF G +I+I+C D D ++ ++D
Sbjct: 164 PPTNPQALLLRK-EHVFGARVFTTKARF--GGKNREISIDCRV-----DEDAKLCFSVDS 215
Query: 220 EEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAG--------MRPALFIFR 268
++ +Q+K L+WKFRGN+ V V+I WDV++WLF + A+F+FR
Sbjct: 216 KQVLQIKRLRWKFRGNEKVEIDGVHVQISWDVYNWLFQSKSSGDGGGGGGHAVFMFR 272
>AT2G25200.1 | chr2:10736580-10737644 REVERSE LENGTH=355
Length = 354
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 116/293 (39%), Gaps = 59/293 (20%)
Query: 10 RSGDQPA-----PSCDIAADEIPVNGHKP---------GRAVTASVYRAKIAGHSRVLTV 55
R G P PS D++P P G A T Y + V +
Sbjct: 8 RGGSSPLSACFHPSATAINDDLPSALPSPSNPSYISTSGDATTTCQYHTNVG----VFFL 63
Query: 56 SWSRDMLS-----HSFAVSVTGVDGASAEC---------RVDLRPWQFWRRAGSRRVELA 101
SWSR L H ++ + T S +C R++++P FWR+ GS+++
Sbjct: 64 SWSRSFLRRSLHLHFYSCNSTNCYLHSLDCYRHSIPFAFRLEIKPLTFWRKNGSKKL--- 120
Query: 102 GTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXXXXDMRKDXXXXXXXXXXX 161
+ +RV+WDL A+FG+G P+P S
Sbjct: 121 -SRKPDIRVVWDLTHAKFGSG-PDPESGFYVAVFVSGEVGLLVGGGN----------LKQ 168
Query: 162 XXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXXXXXXDADMEMTIAIDGEE 221
E++FG R ++ K QG + +I+I+ + D + ++D +
Sbjct: 169 RPRRQILVSKKENLFGNRVYSTKIMI--QGKLREISIDVKVV----NDDASLRFSVDDKS 222
Query: 222 AVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAGMR------PALFIFR 268
+++ LQWKFRGN + ++I WDV +WLF + PA+F+ R
Sbjct: 223 VLKISQLQWKFRGNTKIVIDGVTIQISWDVFNWLFGGKDKVKPDKIPAVFLLR 275
>AT2G27770.1 | chr2:11833089-11834051 REVERSE LENGTH=321
Length = 320
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 14/239 (5%)
Query: 39 ASVYRAKIAGHSRVLTVSWSRDMLSHSFAVSVTGVD-GASAECRVDLRPWQFWRRAGSRR 97
S+YR ++ H ++ V+W ++ ++SV D S +++ F ++ G++
Sbjct: 51 TSIYRITLSKH-LIIKVTWCNPHNNNGLSISVASADQNPSTTLKLNTSSRFFRKKKGNKS 109
Query: 98 VELAGTAPATVRVMWDLRRARFGAGL--PEPRSXXXXXXXXXXXXXXXXXDMRKDXXXXX 155
V+ + + V WDL A++ + L PEP + D ++
Sbjct: 110 VD---SDLGKIEVFWDLSSAKYDSNLCGPEPINGFYVIVLVDGQMGLLLGDSSEETLRKK 166
Query: 156 XXXXXXXXXXXXXXXXXEHVFGKRRF-AAKARFHDQGTVHDIAIECXXXXXXXDADME-- 212
EH G F + K RF + G H+I I C
Sbjct: 167 GFSGDIGFDFSLVSRQ-EHFTGNNTFYSTKVRFVETGDSHEIVIRCNKETEGLKQSNHYP 225
Query: 213 -MTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFS--AGMRPALFIFR 268
+++ ID + ++VK LQW FRGNQ++ V++ WDVHDW FS A+F+FR
Sbjct: 226 VLSVCIDKKTVIKVKRLQWNFRGNQTIFLDGLLVDLMWDVHDWFFSNQGACGRAVFMFR 284
>AT2G36470.1 | chr2:15299385-15300368 REVERSE LENGTH=328
Length = 327
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 18/176 (10%)
Query: 94 GSRRVELAGTAPATVRVMWDLRRARFGAGLPEPRSXXXXXXXXXXXXXXXXXDMRKDXXX 153
GSR++ + + ++WDL A + PEP D+ +
Sbjct: 86 GSRKL-TSSSGSLNAEILWDLSEAEYENNGPEPIRRFFVVVVVNSEITLGVGDVDHERDT 144
Query: 154 XXXXXXXXXXXXXXXXXXXEHVFGKRRFAAKARFHDQGTVHDIAIECXXXXX-------- 205
E G KA+F D G H+I I+C
Sbjct: 145 SSSSSWRVSKT--------ERFSGTCWLTTKAQFSDVGRKHEIQIQCGGGGGGGGEEGYL 196
Query: 206 -XXDADMEMTIAIDGEEAVQVKHLQWKFRGNQSVTFSRAKVEIYWDVHDWLFSAGM 260
+ M++ +D + VK L+W FRGNQ++ F +++ WD+HDW + +
Sbjct: 197 WKVKSPETMSVYVDKRKVFSVKKLKWNFRGNQTMFFDGMLIDMMWDLHDWFYKETL 252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,619,695
Number of extensions: 189994
Number of successful extensions: 628
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 598
Number of HSP's successfully gapped: 14
Length of query: 306
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 208
Effective length of database: 8,419,801
Effective search space: 1751318608
Effective search space used: 1751318608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)