BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0104100 Os05g0104100|AK105679
         (936 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22860.1  | chr1:8083400-8088867 FORWARD LENGTH=962            827   0.0  
AT4G36630.1  | chr4:17272088-17276524 REVERSE LENGTH=1001          56   1e-07

>AT1G22860.1 | chr1:8083400-8088867 FORWARD LENGTH=962
          Length = 961

 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/813 (52%), Positives = 574/813 (70%), Gaps = 38/813 (4%)

Query: 136 LAVSVGKKLLLVDLTLHDADELE---VRTRDIALVDGVKALAWVGDSVFVGTASGYSLFS 192
            AV++G+++LL++L   + + L    V  ++I  + G+K L W+ D V  GT  GYSL S
Sbjct: 175 FAVAIGERMLLIELQCAEKEGLSGSFVVLKEILGIGGIKTLVWLDDYVIAGTVKGYSLIS 234

Query: 193 TTNAQGGDIFTLPESSRPPRVKPLSGGDEXXXXXXXXXXXXXRSGHPVGSSFVFNTTPDC 252
                 G IFTLP+ S PP +K L    +              +G P+G S VF   PD 
Sbjct: 235 CVTGLSGVIFTLPDVSGPPLLKLLCKEWKVLLLVDNVGVVVDTNGQPIGGSLVFRRRPDS 294

Query: 253 IAEVYPYVVVAGDSKVDVYRRKNGAHLQAIPFARPGTGGLIVASEDAGIGSDVVVIATAY 312
           + E+  Y+V  GD K++++++K+GA +Q++ F   G G  ++A+++AG G +++V+ T  
Sbjct: 295 VGELSFYLVTVGDGKMEIHQKKSGACVQSVSFGPQGCGPSLLAADEAGDG-NLLVVTTLS 353

Query: 313 KVFCYRKVSAVEQIKALLRRKSYAEAISLLQEFEADGEISNDMISFVHAQLGFLLFFDLR 372
           K+  YR+V   EQIK LLR+K Y E ISL++E ++ GEIS DM+SF+HAQ+G+LL FDLR
Sbjct: 354 KLIFYRRVPYEEQIKDLLRKKRYRETISLVEELDSQGEISKDMLSFLHAQIGYLLLFDLR 413

Query: 373 FEDAVNHFLLSETMQPAEIFPFIMRDPNRWSDLVPRKRYWGLHAPPKPLEEVIDDGLVTL 432
           FE+AVN FL SE M+P+E+FPFIMRDPNRWS +VPR RYWGLH PP P E+V+D+GL+ +
Sbjct: 414 FEEAVNQFLKSEKMEPSEVFPFIMRDPNRWSLVVPRNRYWGLHPPPAPFEDVVDNGLMAI 473

Query: 433 QQALFLKKAGVDTVVDDDFLSNPPSRADLLEVAIRNIIRYLCASREKDLSSSEMEGVDTL 492
           Q+A FL+KAG+DT VD++F S+PPSRADLL+ AI+NI RYL  SREK L+    EG+DTL
Sbjct: 474 QRANFLRKAGMDTPVDEEFFSDPPSRADLLDSAIKNITRYLEISREKGLTLPVREGIDTL 533

Query: 493 LMYLYRALNLVDDMEKLASSQNSCVVEELESLLDDSGHLRTLAFLYGSKGMCSKSLGIWR 552
           LM LYRALN V+DME LASS N+CVVEELE+LL +SGHLRTLAFLY +KGM +K+L IWR
Sbjct: 534 LMLLYRALNRVEDMENLASSGNNCVVEELETLLTESGHLRTLAFLYATKGMGAKALAIWR 593

Query: 553 ILARNYSTGLWKDH-AILPETDSLETSVGKMSGEEIAAVEASKILQASSDQDLVLEHLGW 611
           +  +NYS+GLW+D   ++P     +  + ++SG+E AA EA++IL+   D +L L+HL W
Sbjct: 594 LFTKNYSSGLWQDSDDLVPYLH--DNELIRLSGKEAAAAEAARILEEPCDPELALQHLSW 651

Query: 612 VADIDQELATAILTSEMREKQLSPEKVVAAIDPEKVGIHQRYLQWLIEEQECDEPHYHTS 671
           +AD++   A  +LTS+ R ++LSPE+V+ AIDP+KV I QRY QWLIEE++  +P  HTS
Sbjct: 652 IADVNPLFAIQVLTSDKRTEELSPEQVIQAIDPKKVEIIQRYFQWLIEERDYTDPQLHTS 711

Query: 672 YALSLSRSAMDAVRLGSNNEE----RNNKEFDSDMQFIYL----LRERLQFFLQSSDLYD 723
           YALSL+RSA++ V + +  +E      ++  DS++  I L    +RERLQ FLQSSDLYD
Sbjct: 712 YALSLARSALECVEVQNGIQEADVPNGSEAHDSNVGSISLFEVDVRERLQAFLQSSDLYD 771

Query: 724 PEEVLYVISESELWLEKAILYRKMGQENIVLQILALKLEDSEAAEQYCAEIGRDDAYIQL 783
           PEE+L ++  SELWLEKAILYR++G+E +VLQ                           L
Sbjct: 772 PEEILELVEGSELWLEKAILYRRIGKETLVLQ-----------------------ILALL 808

Query: 784 LDLYLDPKNGKGPMFTAAVRLLHNHGESLDPIQVLERLSADMPLQLASDTILRMLRAXXX 843
           LD+YLDP+NGK PMF AAVRLLHNHGESLDP+QVL++LS DMPL+LASDTILRMLRA   
Sbjct: 809 LDMYLDPQNGKEPMFKAAVRLLHNHGESLDPLQVLDKLSPDMPLKLASDTILRMLRARVH 868

Query: 844 XXXXXXXXXNLSRATNLDARLTRLEERSRHVQLTDESICDSCRARLGTKLFVMYPDDSVV 903
                    N+SRA ++D+RL RLEERSRH+Q+ DES+CDSC ARLGTKLF MYPDD++V
Sbjct: 869 HHRQGQIVHNISRALDVDSRLARLEERSRHMQINDESLCDSCYARLGTKLFAMYPDDTIV 928

Query: 904 CYRCYRNQGDSASPHGRNFRKGGIFKQSWLVSR 936
           CY+CYR  G+S S  GR+F++  + K  WLV+R
Sbjct: 929 CYKCYRRLGESKSVTGRDFKRDVLIKPGWLVNR 961



>AT4G36630.1 | chr4:17272088-17276524 REVERSE LENGTH=1001
          Length = 1000

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 25/267 (9%)

Query: 152 HDADELEVRTRDIALVDGVKALAWVGDSVFVGTASGYSLFSTTNAQGGDIFTLPESSR-- 209
           HD     V  RD  + D VK+++W G+++ +G    Y + +T N    ++F    S R  
Sbjct: 137 HDGGGGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVILNTANGTLSEVFP---SGRVA 193

Query: 210 PPRVKPLSGGDEXXXXXXXXXXXXXRSGHPVGSSFVFNTTPDCIAEVYPYVVVAGDSKVD 269
           PP V  L  G E             ++G       +  T   C +E    +V+     + 
Sbjct: 194 PPLVISLPSG-ELILGKENIGVFVDQNGK------LLQTERICWSEAPTSIVIQNPYAIA 246

Query: 270 VYRRKNGAHLQAIPFARPGTGGLIVASEDAGIGS-DVVVIATAYKVFCYRKVSAVEQIKA 328
           +  R+    L   P+  P    +++ +    + S + V++     V+    VS   QI  
Sbjct: 247 LLPRRVEVRLLRSPY--PLIQTIVLQNIRRLVKSNNAVIVGLDNSVYVLFPVSIGAQIVQ 304

Query: 329 LLRRKSYAEAISLLQEFEAD-GEISNDMISFVHAQLGFLLFFDLRFEDAVNHFLLSE--- 384
           L    ++ EA++L +    D   +     S +H +    LF +  +E+A+ HFL S+   
Sbjct: 305 LTASGNFEEALALCKVLPPDESSLRAAKESSIHTRFAHYLFENGSYEEAMEHFLASQVDI 364

Query: 385 ----TMQPAEIFP--FIMRDPNRWSDL 405
               +M P+ I P   I+  P++  D+
Sbjct: 365 THVLSMYPSIILPKTTIIPQPDKMVDI 391



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,010,827
Number of extensions: 721870
Number of successful extensions: 1762
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1756
Number of HSP's successfully gapped: 2
Length of query: 936
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 828
Effective length of database: 8,145,641
Effective search space: 6744590748
Effective search space used: 6744590748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)