BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0691500 Os04g0691500|AK100077
         (359 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16950.1  | chr2:7353939-7360637 FORWARD LENGTH=896            487   e-138
AT2G16960.1  | chr2:7364683-7368963 FORWARD LENGTH=548            276   1e-74

>AT2G16950.1 | chr2:7353939-7360637 FORWARD LENGTH=896
          Length = 895

 Score =  487 bits (1253), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 228/350 (65%), Positives = 282/350 (80%)

Query: 9   QEAAEELVPHLGIILQHLMCAYGKYQRRNLRILYDALGTLADAVGAELNQAKYLDIFMPP 68
           ++AAEELVPHLG+ILQHLMCA+GKYQRRNLRI+YDA+GTLAD+V  ELN+  YL+I MPP
Sbjct: 513 EDAAEELVPHLGVILQHLMCAFGKYQRRNLRIVYDAIGTLADSVREELNKPAYLEILMPP 572

Query: 69  LITKWQQLANSDKDLFPLLECFTSIAQALGPGFSQFAEPVFQRCINLIQSQHLAKVDPAA 128
           L+ KWQQL+NSDKDLFPLLECFTSI+QALG GF+ FA+PVFQRC+++IQ Q LAKV+PA+
Sbjct: 573 LVAKWQQLSNSDKDLFPLLECFTSISQALGVGFAPFAQPVFQRCMDIIQLQQLAKVNPAS 632

Query: 129 AGALYDKEFIVCXXXXXXXXXXXXXXXXXXXVSQSSLRDILLQCCMDEAADVRQSALALL 188
           AGA YD+EFIVC                   V QS+LRD+LL CC+DEAADVRQSA AL+
Sbjct: 633 AGAQYDREFIVCSLDLLSGLAEGLGSGIESLVQQSNLRDLLLNCCIDEAADVRQSAFALM 692

Query: 189 GDLSRVCPIHLHPRLQEFLNVAAKQLNPQCVKEAVSVANNACWAIGELAIKIGKEISPVV 248
           GDL+RV P++L PRL +FL +A++QL+    +E +SVANNACWAIGELA+K+ +E+SP+V
Sbjct: 693 GDLARVFPVYLQPRLLDFLEIASQQLSANLNRENLSVANNACWAIGELAVKVRQEVSPIV 752

Query: 249 ITVVSCLVPILKSPEGLNKSLLENSAITLGRLCWVCPDIVAPHMDHFMQAWCNALCMIRD 308
             VVS L  IL+  EG+NK+L+ENSAITLGRL W+ PD+VAPHMDHFM+ WC AL M+RD
Sbjct: 753 AKVVSSLGLILQHGEGVNKALVENSAITLGRLAWIRPDLVAPHMDHFMKPWCMALSMVRD 812

Query: 309 DFEKEDAFHGLCAMVAANPTGAVGSLTFICQACASWNEIKSEGYTMKCAR 358
           D EKEDAF GLCA+V  NP+G V SL FICQA ASW+EI+SE    + ++
Sbjct: 813 DIEKEDAFRGLCAVVKVNPSGGVSSLVFICQAIASWHEIRSEDVQTEVSQ 862



>AT2G16960.1 | chr2:7364683-7368963 FORWARD LENGTH=548
          Length = 547

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/370 (41%), Positives = 216/370 (58%), Gaps = 49/370 (13%)

Query: 9   QEAAEELVPHLGIILQHLMCAYGKYQRRNLRILYDALGTLADAVGAELNQAKYLDIFMPP 68
           ++A ++LVPHL  ILQ LM A+GKYQ+RNL++L DA+  LAD+VG  LN+  Y+ I +PP
Sbjct: 156 EDAGDKLVPHLEKILQQLMRAFGKYQKRNLKVLLDAIRALADSVGINLNKRAYIKILIPP 215

Query: 69  LITKWQQLANSDKDLFPLLECFTSIAQALGPGFSQFAEPVFQRCINLIQSQHLAKVDPAA 128
           L++  +Q++NSDKD+ PLL+CFTSI++AL  GF+ F+  VF+RC++++Q Q LAKVD   
Sbjct: 216 LVSTLEQISNSDKDVIPLLKCFTSISKALEVGFAPFSWYVFERCMDILQLQQLAKVDHDF 275

Query: 129 AGALYDKEFIVCXXXXXXXXXXXXXXXXXXXVSQSSLRDILLQCCMDEAADVRQSALALL 188
           AG  YD+  +VC                   VSQS+LRD+LL+C MDE  DVR+SA AL+
Sbjct: 276 AGVQYDQNIVVCSLEFFSGLSKGLVSGIESLVSQSNLRDMLLKCFMDETPDVRESAFALI 335

Query: 189 GDLSRVCPIHLHPRLQEFLNVAAKQLNPQCVKEAVSVANNACWAIGELAIKI-------- 240
             L++                           E +S ANNAC AIGELA+K         
Sbjct: 336 CHLTKSANFS---------------------GENLSAANNACKAIGELAVKFLVKNKLVN 374

Query: 241 --------GKEISPVVITVVSCLVPILKSPEGLN-KSLLE-----------NSAITLGRL 280
                    +E+SP+V  VV  L  I++  E L  KSL             NSAIT+G L
Sbjct: 375 DMNSMFQYPQEVSPIVTNVVYSLGMIIQLGETLELKSLTTLVEYNAIELAMNSAITVGIL 434

Query: 281 CWVCPDIVAPHMDHFMQAWCNALCMIRDDFEKEDAFHGLCAMVAANPTGAVGSLTFICQA 340
             + PD+ A  +++FM+ WC  L  + DD  KE+AF GLC MV  NP+  V S+ FIC A
Sbjct: 435 ARIRPDLSARSIENFMKPWCMRLATLDDDSTKENAFQGLCEMVKVNPSRYVSSVAFICLA 494

Query: 341 CASWNEIKSE 350
            ASW +++++
Sbjct: 495 IASWKDMENK 504



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.326    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,149,762
Number of extensions: 271022
Number of successful extensions: 854
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 851
Number of HSP's successfully gapped: 2
Length of query: 359
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 259
Effective length of database: 8,364,969
Effective search space: 2166526971
Effective search space used: 2166526971
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 112 (47.8 bits)