BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0685400 Os04g0685400|AK103610
(220 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G44220.1 | chr3:15928216-15929645 FORWARD LENGTH=207 164 2e-41
AT5G22200.1 | chr5:7355688-7356871 FORWARD LENGTH=211 154 4e-38
AT3G11660.1 | chr3:3679031-3679660 REVERSE LENGTH=210 144 3e-35
AT2G35960.1 | chr2:15107150-15107782 FORWARD LENGTH=211 139 9e-34
AT3G52470.1 | chr3:19450750-19451376 FORWARD LENGTH=209 138 2e-33
AT5G06330.1 | chr5:1934961-1935584 REVERSE LENGTH=208 134 3e-32
AT2G35970.1 | chr2:15109007-15109642 FORWARD LENGTH=212 123 9e-29
AT4G09590.1 | chr4:6066128-6066763 FORWARD LENGTH=212 120 6e-28
AT5G53730.1 | chr5:21808072-21808713 REVERSE LENGTH=214 112 2e-25
AT4G01410.1 | chr4:578308-578991 FORWARD LENGTH=228 85 3e-17
AT5G05657.1 | chr5:1689013-1689426 FORWARD LENGTH=138 79 1e-15
AT2G35980.1 | chr2:15110635-15111318 FORWARD LENGTH=228 66 2e-11
AT5G22870.1 | chr5:7647056-7647679 REVERSE LENGTH=208 64 7e-11
AT4G05220.1 | chr4:2685104-2685784 REVERSE LENGTH=227 56 2e-08
AT5G06320.1 | chr5:1931016-1931711 REVERSE LENGTH=232 55 4e-08
AT1G61760.1 | chr1:22807440-22808114 REVERSE LENGTH=225 53 1e-07
AT3G11650.1 | chr3:3676264-3676986 REVERSE LENGTH=241 53 2e-07
AT2G27080.1 | chr2:11566383-11567165 FORWARD LENGTH=261 51 5e-07
>AT3G44220.1 | chr3:15928216-15929645 FORWARD LENGTH=207
Length = 206
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 122/216 (56%), Gaps = 13/216 (6%)
Query: 5 KDCGGHKGCECEKEKVHRRXXXXXXXXXXXXXXXXXXXXXALRPHKPRFYLQDLSVLCLN 64
K+C H E EK+ +R L PH PRF LQD ++ N
Sbjct: 4 KECEHHHD---EDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFN 60
Query: 65 VTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKDVAITVPTRLPVEYQGHYDQ 124
V+ P YL + +Q T+++RN N ++G++YD++D+YA Y++ +T+ T LP YQGH D
Sbjct: 61 VSQPN--YLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDV 118
Query: 125 SVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGWVRWKVGTWISGHYHLRVNC 184
++WSPFL V + P + AL+QD TAG VL++I++DGWVRWKVGTW+SG Y L VNC
Sbjct: 119 TIWSPFLYGTT-VPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNC 177
Query: 185 PALLTVNDXXXXXXXXXXXXXXXFRFQQAAACAVDV 220
PA +T+ ++Q CAVDV
Sbjct: 178 PAYITL-------AGHFSGDGPAVKYQLVQRCAVDV 206
>AT5G22200.1 | chr5:7355688-7356871 FORWARD LENGTH=211
Length = 210
Score = 154 bits (388), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 110/175 (62%), Gaps = 10/175 (5%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L PH PRF LQD+++ NV+ P +L + +Q TV++RN N ++G++YD++D+Y Y++
Sbjct: 46 LHPHGPRFVLQDVTINDFNVSQPN--FLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRN 103
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
+T+ LP YQGH + +VWSPFL V + P L+ AL +D AG VL++I++DGW
Sbjct: 104 QEVTLARLLPSTYQGHLEVTVWSPFLIG-SAVPVAPYLSSALNEDLFAGLVLLNIKIDGW 162
Query: 166 VRWKVGTWISGHYHLRVNCPALLTVNDXXXXXXXXXXXXXXXFRFQQAAACAVDV 220
VRWKVG+W+SG Y L VNCPA +TV ++Q CAVDV
Sbjct: 163 VRWKVGSWVSGSYRLHVNCPAFITVTG-------KLTGTGPAIKYQLVQRCAVDV 210
>AT3G11660.1 | chr3:3679031-3679660 REVERSE LENGTH=210
Length = 209
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 4 IKDCGGHKGCECEKEKVHRRXXXXXXXXXXXXXXXXXXXXXALRPHKPRFYLQDLSVLCL 63
+KDC H + K+ RR L+P KPRF LQD +V
Sbjct: 1 MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 57
Query: 64 NVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKDVAITVPTRLPVEYQGHYD 123
NV+ L + Q T+++RN N ++G+YYD++DVYA Y+ IT PT +P YQGH D
Sbjct: 58 NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 117
Query: 124 QSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGWVRWKVGTWISGHYHLRVN 183
+WSPF+ + P N V+L D+ G VL+ IR DG VRWKVGT+I+G YHL V
Sbjct: 118 VDIWSPFVYGTSVPIAPFN-GVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVK 176
Query: 184 CPALLTVND 192
CPA + +
Sbjct: 177 CPAYINFGN 185
>AT2G35960.1 | chr2:15107150-15107782 FORWARD LENGTH=211
Length = 210
Score = 139 bits (351), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 3/147 (2%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L+P KPRF LQD +V N++ P L + Q T+A+RN N R+G+YYD++ VYA Y++
Sbjct: 43 LQPTKPRFILQDATVYAFNLSQPN--LLTSNFQITIASRNRNSRIGIYYDRLHVYATYRN 100
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
IT+ T +P YQGH + +VWSPF+ + V + P AVAL ++ G+V + IR DG
Sbjct: 101 QQITLRTAIPPTYQGHKEDNVWSPFVYG-NSVPIAPFNAVALGDEQNRGFVTLIIRADGR 159
Query: 166 VRWKVGTWISGHYHLRVNCPALLTVND 192
VRWKVGT I+G YHL V C A + + D
Sbjct: 160 VRWKVGTLITGKYHLHVRCQAFINLAD 186
>AT3G52470.1 | chr3:19450750-19451376 FORWARD LENGTH=209
Length = 208
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Query: 5 KDCGGHKGCECEKEKVHRRXXXXXXXXXXXXXXXXXXXXXALRPHKPRFYLQDLSVLCLN 64
KDCG H G KE V R+ LRP KPRF LQD +V N
Sbjct: 3 KDCGNHGG---GKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFN 59
Query: 65 VTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKDVAITVPTRLPVEYQGHYDQ 124
++ P L + Q T+A+RN N ++G+YYD++ VYA Y + IT+ T +P YQGH +
Sbjct: 60 LSQPN--LLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEV 117
Query: 125 SVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGWVRWKVGTWISGHYHLRVNC 184
+VWSPF+ + P N +VAL +++ G+V + IR DG VRWKV T I+G YH+ V C
Sbjct: 118 NVWSPFVYGTAVPIAPYN-SVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRC 176
Query: 185 PALLTVND 192
A + + +
Sbjct: 177 QAFINLGN 184
>AT5G06330.1 | chr5:1934961-1935584 REVERSE LENGTH=208
Length = 207
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L+P KPRF LQD +V NV+ L + Q T+++RN N ++G+YYD++DVYA Y+
Sbjct: 42 LQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRS 101
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
IT+P+ + YQGH + +VWSPF+ V P N A L QD ++G +++ + LDG
Sbjct: 102 QQITLPSPMLTTYQGHKEVNVWSPFVGGYSVPVAPYN-AFYLDQDHSSGAIMLMLHLDGR 160
Query: 166 VRWKVGTWISGHYHLRVNCPALLT 189
VRWKVG++I+G YHL V C AL+
Sbjct: 161 VRWKVGSFITGKYHLHVRCHALIN 184
>AT2G35970.1 | chr2:15109007-15109642 FORWARD LENGTH=212
Length = 211
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L+P KP F LQD +V N++ P L + Q T+A+RN N +G+YYD + YA Y++
Sbjct: 44 LQPKKPEFILQDTTVYAFNLSQPN--LLTSKFQITIASRNRNSNIGIYYDHLHAYASYRN 101
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
IT+ + LP YQ H + SVWSP L + V + P AVAL ++ +G + I +DG
Sbjct: 102 QQITLASDLPPTYQRHKENSVWSPLLYG-NQVPIAPFNAVALGDEQNSGVFTLTICVDGR 160
Query: 166 VRWKVGTWISGHYHLRVNCPALLTVND 192
VRWKVGT G+YHL V C A + D
Sbjct: 161 VRWKVGTLTIGNYHLHVRCQAFINQAD 187
>AT4G09590.1 | chr4:6066128-6066763 FORWARD LENGTH=212
Length = 211
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L+P P F LQD +V N++ P L + Q T+A+RN N +G+YYD + YA Y++
Sbjct: 44 LQPKNPEFILQDTTVYAFNLSQPN--LLTSKFQITIASRNRNSNIGIYYDHLHAYASYRN 101
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
IT+ + LP YQ H + SVWSP L + V + P AVAL ++ +G + I +DG
Sbjct: 102 QQITLASDLPPTYQRHKEDSVWSPLLYG-NQVPIAPFNAVALGDEQNSGVFTLTICVDGQ 160
Query: 166 VRWKVGTWISGHYHLRVNCPALLTVND 192
VRWKVGT G+YHL V C A + D
Sbjct: 161 VRWKVGTLTIGNYHLHVRCQAFINQAD 187
>AT5G53730.1 | chr5:21808072-21808713 REVERSE LENGTH=214
Length = 213
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L P +P F L + + LN+T ++ L +++Q T+ ++N N +VG+YYDK+ VYA Y+
Sbjct: 49 LHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRG 108
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
IT LP YQ H + ++ + FLQ + + + + ++++ + G +++ +++DG
Sbjct: 109 QQITSEASLPPFYQSHEEINLLTAFLQGTE-LPVAQSFGYQISRERSTGKIIIGMKMDGK 167
Query: 166 VRWKVGTWISGHYHLRVNCPALL 188
+RWK+GTW+SG Y VNC A++
Sbjct: 168 LRWKIGTWVSGAYRFNVNCLAIV 190
>AT4G01410.1 | chr4:578308-578991 FORWARD LENGTH=228
Length = 227
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 47 RPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKDV 106
RPHKPR + ++ LN T P + T++Q +V ARN N RV ++YDK+ +Y YKD
Sbjct: 67 RPHKPRLTVVGAAIYDLNFTAPP--LISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQ 124
Query: 107 AITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGWV 166
IT P LP GH V +P + + + + P +A L DE G VL+ + + G +
Sbjct: 125 IITPPLPLPPLRLGHKSTVVIAPVMGG-NGIPVSPEVANGLKNDEAYGVVLMRVVIFGRL 183
Query: 167 RWKVGTWISGHYHLRVNCPALLTVN 191
RWK G +G Y C L N
Sbjct: 184 RWKAGAIKTGRYGFYARCDVWLRFN 208
>AT5G05657.1 | chr5:1689013-1689426 FORWARD LENGTH=138
Length = 137
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
L P KPRF QD++V NV+ S +Q ++ RN N + +YYD +DVYA Y +
Sbjct: 13 LLPSKPRFIFQDVTVFNFNVSGNPSDLNTPVVQFNLSFRNPNANIRIYYDTLDVYAFYGN 72
Query: 106 VA--ITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLD 163
+ I +PT +P YQGH + SVWSP++ V+P N Q + ++ + LD
Sbjct: 73 GSQQIIIPTPMPSTYQGHKEDSVWSPYIP-----VVPYNALYLDDQHHSRDGNMLMLHLD 127
Query: 164 GWVRW 168
G + W
Sbjct: 128 GRISW 132
>AT2G35980.1 | chr2:15110635-15111318 FORWARD LENGTH=228
Length = 227
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
+RP +F++ D S+ + T P + L + TV RN N R+G+YYD+++ +A Y+
Sbjct: 63 VRPRAIKFHVTDASLTRFDHTSPDNI-LRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEG 121
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
+ T P YQGH + +V +P Q + V+ + L + +G ++I+
Sbjct: 122 KRFSTITLTPF-YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLR 180
Query: 166 VRWKVGTWISGHYHLRVNC 184
VR+K+G +V+C
Sbjct: 181 VRFKLGDLKFRRIKPKVDC 199
>AT5G22870.1 | chr5:7647056-7647679 REVERSE LENGTH=208
Length = 207
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 16/144 (11%)
Query: 47 RPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKDV 106
+P K R+ +++ SV N+T ++ T Q T+ + N N R+ VYY V+++ ++KD
Sbjct: 52 KPKKLRYTVENASVQNFNLT--NDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQ 109
Query: 107 AITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVA------LAQDETAGYVLVDI 160
+ T P +Q + ++ +D ++ N+AV+ L + G + ++
Sbjct: 110 TLAFDTVEPF-HQPRMN-------VKQIDETLIAENVAVSKSNGKDLRSQNSLGKIGFEV 161
Query: 161 RLDGWVRWKVGTWISGHYHLRVNC 184
+ VR+KVG W S H ++ C
Sbjct: 162 FVKARVRFKVGIWKSSHRTAKIKC 185
>AT4G05220.1 | chr4:2685104-2685784 REVERSE LENGTH=227
Length = 226
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 45 ALRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYK 104
+LRPH+PRF++QD V L+ P T+ N N +GVY+D ++ YK
Sbjct: 67 SLRPHRPRFHIQDFVVQGLD-QPTGVENARIAFNVTIL--NPNQHMGVYFDSMEGSIYYK 123
Query: 105 DVAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDG 164
D + + L +Q + ++ + L + + N + D G V + +
Sbjct: 124 DQRVGLIPLLNPFFQQPTNTTIVTGTLTGAS-LTVNSNRWTEFSNDRAQGTVGFRLDIVS 182
Query: 165 WVRWKVGTWISGHYHLRVNC 184
+R+K+ WIS H+ + NC
Sbjct: 183 TIRFKLHRWISKHHRMHANC 202
>AT5G06320.1 | chr5:1931016-1931711 REVERSE LENGTH=232
Length = 231
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
RP+ +F++ D + + P + L + RN N R+GVYYD+++V Y D
Sbjct: 70 FRPNAIKFHVTDAKLTEFTLDPTNN--LRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGD 127
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
+ + YQGH + +V L V+L L +D + +D +L
Sbjct: 128 QRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLK 187
Query: 166 VRWKVGTWISGHYHLRVNC 184
+R+K G S + ++ C
Sbjct: 188 IRFKFGLIKSWRFKPKIKC 206
>AT1G61760.1 | chr1:22807440-22808114 REVERSE LENGTH=225
Length = 224
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 45 ALRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYK 104
+L+PH+PR +++ S+ L+ + + + + A N N VG+YYD ++ YK
Sbjct: 65 SLQPHRPRVHIRGFSISGLS---RPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYYK 121
Query: 105 DVAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAV------ALAQDETAGYVLV 158
+ I YQ + S S+D + P +AV + +D G ++
Sbjct: 122 EKRIGSTKLTNPFYQDPKNTS-------SIDGALSRPAMAVNKDRWMEMERDRNQGKIMF 174
Query: 159 DIRLDGWVRWKVGTWISGHYHLRVNC 184
+++ +R+KV TW S + + +C
Sbjct: 175 RLKVRSMIRFKVYTWHSKSHKMYASC 200
>AT3G11650.1 | chr3:3676264-3676986 REVERSE LENGTH=241
Length = 240
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 46 LRPHKPRFYLQDLSVLCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDKVDVYAQYKD 105
RP+ +FY+ D ++ + P + + + T+ RN N RVGVYYD+ V Y D
Sbjct: 77 FRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTI--RNPNQRVGVYYDEFSVSGYYGD 134
Query: 106 VAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIRLDGW 165
+ YQGH + +V ++ + VVL L DE +G ++ +L
Sbjct: 135 QRFG-SANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRLS 193
Query: 166 VRWKVGTWISGHYHLR 181
VR+K W + L+
Sbjct: 194 VRFKF--WFIKSWKLK 207
>AT2G27080.1 | chr2:11566383-11567165 FORWARD LENGTH=261
Length = 260
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 47 RPHKPRFYLQDLSV--LCLNVTPPASAYLFTTMQATVAARNDNGRVGVYYDK---VDVYA 101
RP P++ ++ SV + LN T P S + TV +RN NG++GVYY+K VDVY
Sbjct: 101 RPEAPKYSIEGFSVSGINLNSTSPISP----SFNVTVRSRNGNGKIGVYYEKESSVDVY- 155
Query: 102 QYKDVAITVPTRLPVEYQGHYDQSVWSPFLQSLDHVVLPPNLAVALAQDETAGYVLVDIR 161
Y DV I+ +PV YQ + +V + S + L + + + + V ++
Sbjct: 156 -YNDVDISNGV-MPVFYQPAKNVTVVK-LVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLK 212
Query: 162 LDGWVRWKVGTWISGHYHLRVNC 184
+ V+ K G+ + + V+C
Sbjct: 213 IKAPVKIKFGSVKTWTMIVNVDC 235
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,225,128
Number of extensions: 144395
Number of successful extensions: 297
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 281
Number of HSP's successfully gapped: 18
Length of query: 220
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 125
Effective length of database: 8,502,049
Effective search space: 1062756125
Effective search space used: 1062756125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 109 (46.6 bits)