BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0682800 Os04g0682800|AK121846
(1154 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00630.2 | chr4:261655-267789 REVERSE LENGTH=1186 1179 0.0
AT1G01790.1 | chr1:284781-290869 FORWARD LENGTH=1194 1179 0.0
AT4G04850.2 | chr4:2453174-2457490 FORWARD LENGTH=777 285 8e-77
AT5G51710.1 | chr5:21004566-21008580 REVERSE LENGTH=569 89 2e-17
AT5G11800.1 | chr5:3803635-3808069 REVERSE LENGTH=598 86 2e-16
AT2G19600.1 | chr2:8479275-8483482 FORWARD LENGTH=593 84 6e-16
>AT4G00630.2 | chr4:261655-267789 REVERSE LENGTH=1186
Length = 1185
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1121 (60%), Positives = 780/1121 (69%), Gaps = 55/1121 (4%)
Query: 63 PLALRTRGRALRCQGNDSLAYVDGP------LEGTNGSVVDNTEDEANSSGLDEEKGDDD 116
PL R L CQ +DS+ + G EG++ V +++E ++ E+
Sbjct: 91 PLGFR-----LLCQSSDSVGDLVGNDRNLEFAEGSDDREVTFSKEEKDTR---EQDSAPS 142
Query: 117 AENLRDLLQKARKELEVARLNSTMFEEKAQRISESAIALKDRADKAQSDVSSAVTTIQEI 176
E LRDLL KA KELEVA LNSTMFEEKAQRISE AIALKD A A +DV+ + +QE
Sbjct: 143 LEELRDLLNKATKELEVASLNSTMFEEKAQRISEVAIALKDEAASAWNDVNQTLNVVQEA 202
Query: 177 ISKEADAKEAVRTATMALSMAEARLQLASEALDAKRGSVGPMEVSIDDVE--EEALASAQ 234
+ +E+ AKEAV+ ATMALS+AEARLQ+A E+L+A+ + D V+ EEAL SA+
Sbjct: 203 VDEESVAKEAVQKATMALSLAEARLQVALESLEAEGYNTSEESEVRDGVKDKEEALLSAK 262
Query: 235 EEIKECQESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDASKAEEDVANIMVLAE 294
+IKECQE+L+ CEE+LRR+Q KK ELQKEVDRL E AERA + A KAEEDVANIMVLAE
Sbjct: 263 ADIKECQENLASCEEQLRRLQVKKDELQKEVDRLNEAAERAQISALKAEEDVANIMVLAE 322
Query: 295 QAVALEMEAAQRANDAELALQKAEKAISSVDAVVELPAPAEEQVSDEEDNVSEVYDYSSD 354
QAVA E+EA QR NDAE+ALQ+AEK + +E +V D +
Sbjct: 323 QAVAFELEATQRVNDAEIALQRAEKTLFGSQT--------------QETTQGKVLDGKNT 368
Query: 355 AIDDIPERDEVSNVERLTVGDLAVEGIEQLESSREMSDDESTDKLLVEPQKEAEPDIDKS 414
+ + E+ +V DL V G+ ++ D K + KEAE + +KS
Sbjct: 369 IVGEDEVLSEIVDVSHQAERDLVVVGVSSDVGTQSYESDNENGKPTADFAKEAEGEAEKS 428
Query: 415 KQ---GKKQEIER---KESQPSNAPKASLXXXXXXXXXXXXXXXXDGEFTPTSVFKGLMK 468
K KKQE+++ +ES N K SL DG T VF+ L++
Sbjct: 429 KNVVLTKKQEVQKDLPRESSSHNGTKTSLKKSSRFFPASFFSSNGDGTAT---VFESLVE 485
Query: 469 STRKHAPKLVVGIVLLGAG-AFFLNRAEKSSQLFXX-XXXXXXXXXXXXXAKPIVREMRK 526
S ++ PKL++G LLGAG A + N +++QL KP++R+M+K
Sbjct: 486 SAKQQWPKLILGFTLLGAGVAIYSNGVGRNNQLPQQPNIVSTSAEDVSSSTKPLIRQMQK 545
Query: 527 IPQRVKKLIELLPHQEVNEEEASLFDILYLLLASVVFVPLFQKIPGGSPVLGYLAAGVLI 586
+P+R+KKL+E+ P QEVNEEEASL D+L+LLLASV+FVPLFQKIPGGSPVLGYLAAG+LI
Sbjct: 546 LPKRIKKLLEMFPQQEVNEEEASLLDVLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILI 605
Query: 587 GPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATTAAV 646
GPYGLSIIR+VHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVL T A +
Sbjct: 606 GPYGLSIIRNVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAVI 665
Query: 647 GMIAHRFAVLPGPAAIVIGSGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDXXXX 706
G+I H A GPAAIVIG+GLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQD
Sbjct: 666 GLITHYVAGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVV 725
Query: 707 XXXXXXXXXSPNSSKGGVGFQXXXXXXXXXXXXXXXXXXXXXXGGRL-----------LL 755
SPNSSKGG+GFQ GGRL LL
Sbjct: 726 VLLILIPLISPNSSKGGIGFQAIAEALGLAAIKAAVAITGIIAGGRLFYNALIFWYTQLL 785
Query: 756 RPIYKQIAENRNAEIFSANTLLVIFGTSLLTARXXXXXXXXXXXXXXXXXETEFSLQVES 815
RPIYKQIAENRNAEIFSANTLLVI GTSLLTAR ETEFSLQVES
Sbjct: 786 RPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVES 845
Query: 816 DIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPAISVILGLLIIGKTMLVTFIGRVFGISTI 875
DIAPYRGLLLGLFFMTVGMSIDPKLLL+NFP I LGLL++GKT+LV IG++FGIS I
Sbjct: 846 DIAPYRGLLLGLFFMTVGMSIDPKLLLANFPLIMGTLGLLLVGKTILVVIIGKLFGISII 905
Query: 876 AAVRVGLLLAPGGEFAFVAFGEAVNQGXXXXXXXXXXXXVVGISMALTPWLAAGGQFLAS 935
+AVRVGLLLAPGGEFAFVAFGEAVNQG VVGISMALTPWLAAGGQ +AS
Sbjct: 906 SAVRVGLLLAPGGEFAFVAFGEAVNQGIMTPQLSSLLFLVVGISMALTPWLAAGGQLIAS 965
Query: 936 KFEQHDVRSLLPVESETDDLQDHIIILGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVG 995
+FE DVRSLLPVESETDDLQ HIII GFGR+GQIIAQLLSERLIPFVALDV SDRVA+G
Sbjct: 966 RFELQDVRSLLPVESETDDLQGHIIICGFGRIGQIIAQLLSERLIPFVALDVSSDRVAIG 1025
Query: 996 RALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRAVWALSKYFPNVKTFVRAH 1055
R+LDLPVYFGDAGSREVLHK+GA+RACAAAI LDTPGANYR VWALSKYFPNVKTFVRAH
Sbjct: 1026 RSLDLPVYFGDAGSREVLHKIGADRACAAAIALDTPGANYRCVWALSKYFPNVKTFVRAH 1085
Query: 1056 DVDHGVNLEKAGATAVVPETLEPSXXXXXXXXXXXXXPMSEIAATVNEFRNRHLSELTEL 1115
DVDHG+NLEKAGATAVVPETLEPS P SEIA T+NEFR+RHLSEL EL
Sbjct: 1086 DVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIATTINEFRSRHLSELAEL 1145
Query: 1116 CATSGSSLGYGYSRVMSISK--SKTVTSDDESETVDGALAI 1154
C SGSSLGYG+SR S K S + TSDD ++ ++G LAI
Sbjct: 1146 CEASGSSLGYGFSRSTSKPKPPSPSETSDD-NQIIEGTLAI 1185
>AT1G01790.1 | chr1:284781-290869 FORWARD LENGTH=1194
Length = 1193
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1186 (57%), Positives = 804/1186 (67%), Gaps = 53/1186 (4%)
Query: 4 SRFTAPRPGLQIGAAGNGFRACSLRRLRYRVCGGNPMGASALGGCGSRSLFYLAPNHGSP 63
+R +P+ G+ I + + +C RLR V + + + C S FY H +
Sbjct: 25 NRLISPK-GISITSGDSKVHSC--FRLRRNVAQSGTL--NLMNACFS-GRFYSGHLHSTK 78
Query: 64 LALRTRGRA--------LRCQGNDSLAYVDGPLEGTNGSVVDNTEDEANSSGLDEEKGDD 115
L +A LRCQG++SL D S + E EA + D
Sbjct: 79 SILGNGHQAKRIPFGFRLRCQGHESLGNADSNDHRIGESSESSDETEATDLKDARVENDT 138
Query: 116 DA-ENLRDLLQKARKELEVARLNSTMFEEKAQRISESAIALKDRADKAQSDVSSAVTTIQ 174
D+ E L++LL KA KELEVARLNSTMFEEKAQRISE AIALKD A A DV+ + I+
Sbjct: 139 DSLEELKELLHKAIKELEVARLNSTMFEEKAQRISERAIALKDEAATAWLDVNKTLDVIR 198
Query: 175 EIISKEADAKEAVRTATMALSMAEARLQLASEALDAKRGSVGP-----MEVSID-DVEEE 228
+ + +EA AKEAV+TATMALS+AEARLQ+ E+L+A G+ P E +ID + +EE
Sbjct: 199 DTVYEEALAKEAVQTATMALSLAEARLQVIVESLEAGAGNDIPHVSEETEETIDVNDKEE 258
Query: 229 ALASAQEEIKECQESLSKCEEELRRIQEKKMELQKEVDRLTELAERALLDASKAEEDVAN 288
AL +A+++IKECQ +L CE +L + KK ELQKEVD+L E AE + + KAEEDV N
Sbjct: 259 ALLAAKDDIKECQVNLDNCESQLSALLSKKDELQKEVDKLNEFAETIQISSLKAEEDVTN 318
Query: 289 IMVLAEQAVALEMEAAQRANDAELALQKAEKAISSVDAVVELPAPAEEQVSDEEDNVSEV 348
IM LAEQAVA E+EA QR NDAE+ALQ+AEK++S + + P + Q+SDEE + +
Sbjct: 319 IMKLAEQAVAFELEATQRVNDAEIALQRAEKSLS----ISQTPEETQGQLSDEETSQEDA 374
Query: 349 YDYSSDAIDDIPERDE----------VSNVERLTVGDLAVEGIEQLESSREMSDDESTDK 398
S + ++D+ + E V + V D+ + ++L E SD E+ K
Sbjct: 375 MVLSGN-VEDVTHQVEKESPKDGDLPVVQITAELVPDIVGQRNKKLTQPYESSDHEN-GK 432
Query: 399 LLVEPQKEAEPDIDKSK---QGKKQEIER---KESQPSNAPKASLXXXXXXXXXXXXXXX 452
VE K E D +K K Q KKQE ++ KE N+PKAS
Sbjct: 433 PSVESSKVVEADSEKPKINVQTKKQETQKDLPKEGSSLNSPKASFNKSSRFFSASFFSSN 492
Query: 453 XDGEFTPTSVFKGLMKSTRKHAPKLVVGIVLLGAGAF-FLNRAEKSSQLFXX-XXXXXXX 510
DG T VF L+ S ++ PKLV+G+ LLGAG + N ++QL
Sbjct: 493 PDGTAT---VFGSLVGSVKQQWPKLVLGLALLGAGLTLYSNGVGGNNQLLQQPDVTSTST 549
Query: 511 XXXXXXAKPIVREMRKIPQRVKKLIELLPHQEVNEEEASLFDILYLLLASVVFVPLFQKI 570
KP++R+++K+P+R+KKL+E++PHQEVNEEEASLFD L+LLLASV+FVPLFQKI
Sbjct: 550 EDVSSSTKPLIRQVQKLPKRIKKLLEMIPHQEVNEEEASLFDFLWLLLASVIFVPLFQKI 609
Query: 571 PGGSPVLGYLAAGVLIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKY 630
PGGSPVLGYLAAG+LIGPYGLSIIR+VHGT+AIAEFGVVFLLFNIGLELSVERLSSMKKY
Sbjct: 610 PGGSPVLGYLAAGILIGPYGLSIIRNVHGTRAIAEFGVVFLLFNIGLELSVERLSSMKKY 669
Query: 631 VFGLGSAQVLATTAAVGMIAHRFAVLPGPAAIVIGSGLALSSTAVVLQVLQERGESTSRH 690
VFGLGSAQVL T A VG++AH A GPAAIVIG+GLALSSTAVVLQVLQERGESTSRH
Sbjct: 670 VFGLGSAQVLVTAAVVGLLAHYVAGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRH 729
Query: 691 GRATFSVLLFQDXXXXXXXXXXXXXSPNSSKGGVGFQXXXXXXXXXXXXXXXXXXXXXXG 750
GRA+FSVLLFQD SPNSSKGG+GFQ G
Sbjct: 730 GRASFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAG 789
Query: 751 GRLLLRPIYKQIAENRNAEIFSANTLLVIFGTSLLTARXXXXXXXXXXXXXXXXXETEFS 810
GRLLLRPIYKQIAENRNAEIFSANTLLVI GTSLLTAR ETEFS
Sbjct: 790 GRLLLRPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFS 849
Query: 811 LQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPAISVILGLLIIGKTMLVTFIGRVF 870
LQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFP I LGLLI+GKTMLV +G++F
Sbjct: 850 LQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIVGTLGLLIVGKTMLVVIMGKLF 909
Query: 871 GISTIAAVRVGLLLAPGGEFAFVAFGEAVNQGXXXXXXXXXXXXVVGISMALTPWLAAGG 930
GIS I+A+RVGLLLAPGGEFAFVAFGEAVNQG VVGISMA+TPWLAAGG
Sbjct: 910 GISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSPQLSSLLFLVVGISMAITPWLAAGG 969
Query: 931 QFLASKFEQHDVRSLLPVESETDDLQDHIIILGFGRVGQIIAQLLSERLIPFVALDVRSD 990
Q +AS+FE HDVRSLLPVESETDDLQ HIII GFGRVGQIIAQLLSERLIPFVALDV SD
Sbjct: 970 QLIASRFELHDVRSLLPVESETDDLQGHIIICGFGRVGQIIAQLLSERLIPFVALDVSSD 1029
Query: 991 RVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRAVWALSKYFPNVKT 1050
RV +GR+LDLPVYFGDAGS+EVLHK+GA RACAA + LD PGANYR VWALSK++PNVKT
Sbjct: 1030 RVTIGRSLDLPVYFGDAGSKEVLHKIGAGRACAAVVALDAPGANYRCVWALSKFYPNVKT 1089
Query: 1051 FVRAHDVDHGVNLEKAGATAVVPETLEPSXXXXXXXXXXXXXPMSEIAATVNEFRNRHLS 1110
FVRAHDV HG+NLEKAGATAVVPETLEPS P SEIA T+NEFR RHLS
Sbjct: 1090 FVRAHDVVHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIANTINEFRTRHLS 1149
Query: 1111 ELTELCATSGSSLGYGYSRVMSISKSKTVTSD--DESETVDGALAI 1154
ELTELC SGSSLGYGYSR SK K SD +++ ++G +
Sbjct: 1150 ELTELCEASGSSLGYGYSRT---SKPKPQPSDASGDNQIIEGGTVV 1192
>AT4G04850.2 | chr4:2453174-2457490 FORWARD LENGTH=777
Length = 776
Score = 285 bits (730), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 280/561 (49%), Gaps = 43/561 (7%)
Query: 551 FDILYLLLASVVFVPLFQKIPGGSPVLGYLAAGVLIGPYGLSIIRHVHGTKAIAEFGVVF 610
FD L L+ +V+ VP F +I SP+LG+ AGV++ +GL IR++ K ++E+G++F
Sbjct: 106 FDTLTFLMVTVIIVPAF-RILKASPILGFFFAGVVLNQFGL--IRNLTDVKVLSEWGILF 162
Query: 611 LLFNIGLELSVERLSSMKKYVFGLGSAQVLATTAA-----------VGMIAHRFAVLPGP 659
LLF +GLELS+ RL ++ K+ FG+G QVL TAA +G F P
Sbjct: 163 LLFEMGLELSLARLKALAKFAFGMGLTQVLLCTAAFTAFELPPNGAIGTKILEFLFHSRP 222
Query: 660 ---------AAIVIGSGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDXXXXXXXX 710
A+VIG+ L+LSS+A VLQ+L E+GE +R G AT +LL QD
Sbjct: 223 DLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLV 282
Query: 711 XXXXXSPNSSKGGVGFQXXXXXXXXXXXXXXXXXXXXXXGGRLLLRPIYKQIAENRNAEI 770
P +G + GG+ LR I++ +AE R++E
Sbjct: 283 IL----PVLESQDIGGESIWPMLAKESAKALGGLGILSLGGKFFLRRIFEVVAETRSSEA 338
Query: 771 FSANTLLVIFGTSLLTARXXXXXXXXXXXXXXXXXETEFSLQVESDIAPYRGLLLGLFFM 830
F A LL + GTSL+T ET F Q+E+DI P+RGLLLGLFF+
Sbjct: 339 FVALCLLTVAGTSLVTQWLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFV 398
Query: 831 TVGMSIDPKLLLSNFPAISVILGLLIIGKTMLVTFIGRVFGISTIAAVRVGLLLAPGGEF 890
T G SID ++L +P + +LG LI+ KT+++T IG G++ +VRVG LL+ GGEF
Sbjct: 399 TTGTSIDMEVLFREWPNVLSLLGGLIVIKTLIITAIGPRVGLTIQESVRVGFLLSQGGEF 458
Query: 891 AFVAFGEAVNQGXXXXXXXXXXXXVVGISMALTPWLAAGGQ----FLASKFEQHDVRSLL 946
AFV F A G VV +SMALTP+L G+ FL + + +
Sbjct: 459 AFVVFSLANRLGVLPNELNKLLIIVVVLSMALTPYLNQLGRKAADFLDERLDPGEKIG-- 516
Query: 947 PVESETDDLQDHIIILGFGRVGQIIAQLLSERLI--------PFVALDVRSDRVAVGRAL 998
E D+ + I+I+GFG++GQ++A LS L+ P++ D+ V R L
Sbjct: 517 --EDVNFDVSESIVIIGFGQMGQVLANFLSTPLVSDSDLVGWPYIGFDLNPAVVKESRKL 574
Query: 999 DLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRAVWALSKYFPNVKTFVRAHDVD 1058
P+ +GD VL G A I AV L FP + RA D+
Sbjct: 575 GFPILYGDGSRPSVLQSAGVSSPKAIMIMYKGKKRTTEAVQRLRLAFPGSPIYARAQDLP 634
Query: 1059 HGVNLEKAGATAVVPETLEPS 1079
H + L+KAGAT + E E S
Sbjct: 635 HLLELKKAGATDAILENAETS 655
>AT5G51710.1 | chr5:21004566-21008580 REVERSE LENGTH=569
Length = 568
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 14/156 (8%)
Query: 557 LLASVVFVPLFQKIPG------GSPVL-GYLAAGVLIGPYGLSIIRHVHGTKAIAEFGVV 609
L++ +V + +F I G G PV+ GYL AG +IGP GL I + + +A+FGVV
Sbjct: 154 LISDLVVIIVFAAIGGIVFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVV 213
Query: 610 FLLFNIGLELSVERLSSMKKYVFGLGSAQVLATTAAVGMIAHRFAVLPG---PAAIVIGS 666
FLLF +GLE S+ +L + G Q++ G+ A+L G I +G+
Sbjct: 214 FLLFALGLEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVT----ALLCGARLSEGIFVGA 269
Query: 667 GLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQD 702
L++SSTAVV++ L ER ++S HG+ T +L+FQD
Sbjct: 270 FLSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQD 305
>AT5G11800.1 | chr5:3803635-3808069 REVERSE LENGTH=598
Length = 597
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 573 GSPVL-GYLAAGVLIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYV 631
G PV+ GYL AG +IGP GL+ I + + +A+FGVVFLLF +GLE S +L ++
Sbjct: 199 GQPVITGYLLAGSIIGPGGLNFISEMVQVETVAQFGVVFLLFALGLEFSTAKLKVVRSVA 258
Query: 632 FGLGSAQVLATTAAVGMIAHRFAVLPG---PAAIVIGSGLALSSTAVVLQVLQERGESTS 688
G Q+L G+ L G + +G+ L++SSTAVVL+ L E+ + S
Sbjct: 259 VLGGLLQILLFMFLCGITVS----LCGGKRSEGVFVGAFLSMSSTAVVLKFLMEKNSTNS 314
Query: 689 RHGRATFSVLLFQD 702
HG+ T +L+ QD
Sbjct: 315 LHGQVTIGILILQD 328
>AT2G19600.1 | chr2:8479275-8483482 FORWARD LENGTH=593
Length = 592
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 573 GSPVL-GYLAAGVLIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYV 631
G PV+ GYL AG +IGP GLS + + + +A+FGV+FLLF +GLE S +L ++
Sbjct: 191 GQPVITGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSAAKLRVVRAVA 250
Query: 632 FGLGSAQVLATTAAVGMIAHRFAVLPG---PAAIVIGSGLALSSTAVVLQVLQERGESTS 688
G Q+ G+ A L G I +G+ L++SSTAVVL+ L ER ++
Sbjct: 251 IPGGLLQIFLFMCLSGITAS----LCGGKLTEGIFVGAFLSMSSTAVVLKFLMERNSISA 306
Query: 689 RHGRATFSVLLFQD 702
HG+ T L+ QD
Sbjct: 307 LHGQITVGTLILQD 320
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,221,409
Number of extensions: 790088
Number of successful extensions: 5460
Number of sequences better than 1.0e-05: 35
Number of HSP's gapped: 5464
Number of HSP's successfully gapped: 47
Length of query: 1154
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 1045
Effective length of database: 8,118,225
Effective search space: 8483545125
Effective search space used: 8483545125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 117 (49.7 bits)