BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0677300 Os04g0677300|AK108084
(255 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G65690.1 | chr1:24431642-24432898 REVERSE LENGTH=253 129 1e-30
AT5G36970.1 | chr5:14604367-14605194 REVERSE LENGTH=249 126 9e-30
AT1G54540.1 | chr1:20367702-20368421 REVERSE LENGTH=240 120 5e-28
AT2G27080.1 | chr2:11566383-11567165 FORWARD LENGTH=261 88 5e-18
AT5G21130.1 | chr5:7185968-7186813 FORWARD LENGTH=282 72 4e-13
AT5G06320.1 | chr5:1931016-1931711 REVERSE LENGTH=232 68 5e-12
AT2G35460.1 | chr2:14905788-14906504 FORWARD LENGTH=239 65 4e-11
AT3G11650.1 | chr3:3676264-3676986 REVERSE LENGTH=241 64 9e-11
AT2G35980.1 | chr2:15110635-15111318 FORWARD LENGTH=228 63 2e-10
AT3G52470.1 | chr3:19450750-19451376 FORWARD LENGTH=209 53 1e-07
AT3G11660.1 | chr3:3679031-3679660 REVERSE LENGTH=210 53 2e-07
AT2G35960.1 | chr2:15107150-15107782 FORWARD LENGTH=211 52 4e-07
AT3G44220.1 | chr3:15928216-15929645 FORWARD LENGTH=207 50 1e-06
AT5G06330.1 | chr5:1934961-1935584 REVERSE LENGTH=208 49 2e-06
AT4G09590.1 | chr4:6066128-6066763 FORWARD LENGTH=212 49 3e-06
AT2G35970.1 | chr2:15109007-15109642 FORWARD LENGTH=212 47 8e-06
>AT1G65690.1 | chr1:24431642-24432898 REVERSE LENGTH=253
Length = 252
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYY-DGGEVT 148
ILY VFKPK+PD+ +DRL +TRF +N ++ ++ AF V +T+ NPN +IGIYY DG ++T
Sbjct: 86 ILYLVFKPKLPDYSIDRLQLTRFALNQDSS-LTTAFNVTITAKNPNEKIGIYYEDGSKIT 144
Query: 149 ASFNGTELCRGGFPALYQGHRSTVRPVILLAGETRLDS-XXXXXXXXXXXXGFVPLTVWA 207
+ +L G P YQGH +T + + G+T+ S G +PL +
Sbjct: 145 VWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRV 204
Query: 208 RVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCSFKLKV 255
P+R+KFG +KL+++ C + VD+L I+I+S+SC F+L++
Sbjct: 205 NQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQSSSCKFRLRL 252
>AT5G36970.1 | chr5:14604367-14605194 REVERSE LENGTH=249
Length = 248
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 98/168 (58%), Gaps = 3/168 (1%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYY-DGGEVT 148
ILY VF+PK PD+++DRL +TRF +N + +S AF V +T+ NPN +IGIYY DG +++
Sbjct: 82 ILYLVFRPKFPDYNIDRLQLTRFQLNQDLS-LSTAFNVTITAKNPNEKIGIYYEDGSKIS 140
Query: 149 ASFNGTELCRGGFPALYQGHRSTVRPVILLAGETR-LDSXXXXXXXXXXXXGFVPLTVWA 207
+ T + G P YQGH +T ++ + G T+ S G +PL +
Sbjct: 141 VLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRV 200
Query: 208 RVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCSFKLKV 255
P+RIK G +KL K+ C + VD+L A IR+RS++C ++ ++
Sbjct: 201 TQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRVRSSNCKYRFRL 248
>AT1G54540.1 | chr1:20367702-20368421 REVERSE LENGTH=240
Length = 239
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 71 CWXXXXXXXXXXXXXXXXXILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVT 130
CW ++Y VF PK+P + V+ L VT +N + +S F+VE+T
Sbjct: 55 CWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLS-LSAEFKVEIT 113
Query: 131 STNPNRRIGIYYD-GGEVTASFNGTELCRGGFPALYQGHRSTVRPVILLAGETRLDSXXX 189
+ NPN +IGIYY+ GG + ++ T+LC G P YQGHR+ + + L G + +
Sbjct: 114 ARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQYGNTVL 173
Query: 190 XXXXXXXXXGFVPLTVWARVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSC 249
G VPL + P+ IK G +K+ K+ +C LVVD+L I I+++ C
Sbjct: 174 AALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDC 233
Query: 250 SFKLKV 255
SFK K+
Sbjct: 234 SFKAKL 239
>AT2G27080.1 | chr2:11566383-11567165 FORWARD LENGTH=261
Length = 260
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 5/163 (3%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDG-GEVT 148
+LY +++P+ P + ++ +V+ ++N+T+ +S +F V V S N N +IG+YY+ V
Sbjct: 95 VLYLIYRPEAPKYSIEGFSVSGINLNSTSP-ISPSFNVTVRSRNGNGKIGVYYEKESSVD 153
Query: 149 ASFNGTELCRGGFPALYQGHRS-TVRPVILLAGETRLDSXXXXXXXXXXXXGFVPLTVWA 207
+N ++ G P YQ ++ TV ++L + +L S VP +
Sbjct: 154 VYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKI 213
Query: 208 RVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCS 250
+ P++IKFG++K W M C++ VD L A RI S CS
Sbjct: 214 KAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPS--RIVSRKCS 254
>AT5G21130.1 | chr5:7185968-7186813 FORWARD LENGTH=282
Length = 281
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 91 LYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYD-GGEVTA 149
Y V++P P F V ++VT ++ +++ S +++ S N ++G+ Y+ G E
Sbjct: 117 FYLVYQPHKPQFSVSGVSVTGINLTSSSP-FSPVIRIKLRSQNVKGKLGLIYEKGNEADV 175
Query: 150 SFNGTELCRGGFPALYQGHRSTVRPVILLAGET-RLDSXXXXXXXXXXXXGFVPLTVWAR 208
FNGT+L G F A Q + V +L G + +L S G VP + +
Sbjct: 176 FFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLRIK 235
Query: 209 VPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIR 243
P++ K G++ W MT C + VD L A ++
Sbjct: 236 APVKFKVGSVTTWTMTITVDCKITVDKLTASATVK 270
>AT5G06320.1 | chr5:1931016-1931711 REVERSE LENGTH=232
Length = 231
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
I++ +F+P FHV +T F ++ T + ++ T NPNRRIG+YYD EV
Sbjct: 65 IIWLIFRPNAIKFHVTDAKLTEFTLDPTN-NLRYNLDLNFTIRNPNRRIGVYYDEIEVRG 123
Query: 150 SFNGTEL-CRGGFPALYQGHRSTVRPVILLAGE--TRLDSXXXXXXXXXXXXGFVPLTVW 206
+ YQGH++T L G+ LD +
Sbjct: 124 YYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAK 183
Query: 207 ARVPIRIKFGAIKLWKMTGKATCNLVV 233
R+ IR KFG IK W+ K C+L V
Sbjct: 184 LRLKIRFKFGLIKSWRFKPKIKCDLKV 210
>AT2G35460.1 | chr2:14905788-14906504 FORWARD LENGTH=239
Length = 238
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
IL+ + +P + F V +TRF+ + + + + + NPN+R+GI+YD EV
Sbjct: 71 ILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYDQLEVRG 130
Query: 150 SFNGTELCRGGFPALYQGHRSTV--------RPVILLAGETRLDSXXXXXXXXXXXXGFV 201
+ + YQGH++T + ++LL R D G
Sbjct: 131 YYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRD------FREDRRSGVY 184
Query: 202 PLTVWARVPIRIKFGAIKLWKMTGKATCNLVV 233
+ V R +R KFG + W + K C+L V
Sbjct: 185 RIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKV 216
>AT3G11650.1 | chr3:3676264-3676986 REVERSE LENGTH=241
Length = 240
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
IL+ +F+P F+V + RF + + + ++ T NPN+R+G+YYD V+
Sbjct: 72 ILWLIFRPNAVKFYVADANLNRFSFDPNN-NLHYSLDLNFTIRNPNQRVGVYYDEFSVSG 130
Query: 150 SFNGTELCRGGFPALYQGHRSTVRPVILLAGETR--LDSXXXXXXXXXXXXGFVPLTVWA 207
+ + YQGH++T + + G+ L G +
Sbjct: 131 YYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKL 190
Query: 208 RVPIRIKFGAIKLWKMTGKATCN 230
R+ +R KF IK WK+ K C+
Sbjct: 191 RLSVRFKFWFIKSWKLKPKIKCD 213
>AT2G35980.1 | chr2:15110635-15111318 FORWARD LENGTH=228
Length = 227
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
I + + +P+ FHV ++TRFD + + + V NPN+RIG+YYD E A
Sbjct: 58 IFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHA 117
Query: 150 SFNGTELCRGGFPALYQGHRSTV---------RPVILLAGETRLDSXXXXXXXXXXXXGF 200
+ G YQGH++T VI AG++R G
Sbjct: 118 YYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSR-------TLNAERISGV 170
Query: 201 VPLTVWARVPIRIKFGAIKLWKMTGKATCN 230
+ + R+ +R K G +K ++ K C+
Sbjct: 171 YNIEIKFRLRVRFKLGDLKFRRIKPKVDCD 200
>AT3G52470.1 | chr3:19450750-19451376 FORWARD LENGTH=209
Length = 208
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
+++ + +P P F + TV F+++ S+ F+V + S NPN +IGIYYD V A
Sbjct: 36 LVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSN-FQVTIASRNPNSKIGIYYDRLHVYA 94
Query: 150 SFNGTEL-CRGGFPALYQGHRS 170
++ ++ R P YQGH+
Sbjct: 95 TYMNQQITLRTAIPPTYQGHKE 116
>AT3G11660.1 | chr3:3679031-3679660 REVERSE LENGTH=210
Length = 209
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATV-SDAFEVEVTSTNPNRRIGIYYDGGEVT 148
+++A+ +P P F + TV F+V+ + + F++ ++S NPN +IGIYYD +V
Sbjct: 35 LIWAILQPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVY 94
Query: 149 ASFNGTELCR-GGFPALYQGHR 169
A++ ++ P YQGH+
Sbjct: 95 ATYRSQQITFPTSIPPTYQGHK 116
>AT2G35960.1 | chr2:15107150-15107782 FORWARD LENGTH=211
Length = 210
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
+++ + +P P F + TV F+++ S+ F++ + S N N RIGIYYD V A
Sbjct: 38 LVWIILQPTKPRFILQDATVYAFNLSQPNLLTSN-FQITIASRNRNSRIGIYYDRLHVYA 96
Query: 150 SFNGTEL-CRGGFPALYQGHRS-TVRPVILLAGETRLDSXXXXXXXXXXXXGFVPLTVWA 207
++ ++ R P YQGH+ V + + GFV L + A
Sbjct: 97 TYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRA 156
Query: 208 RVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCSFKL 253
+R K G + K C ++ + + N+ + L
Sbjct: 157 DGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYML 202
>AT3G44220.1 | chr3:15928216-15929645 FORWARD LENGTH=207
Length = 206
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
+++A+ P P F + T+ F+V+ S+ +V ++S NPN +IGI+YD ++ A
Sbjct: 37 LVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSN-LQVTLSSRNPNDKIGIFYDRLDIYA 95
Query: 150 SFNGTELCRGG-FPALYQGH 168
S+ ++ PA YQGH
Sbjct: 96 SYRNQQVTLATLLPATYQGH 115
>AT5G06330.1 | chr5:1934961-1935584 REVERSE LENGTH=208
Length = 207
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 92 YAVFKPKIPDFHVDRLTVTRFDVNATAATV-SDAFEVEVTSTNPNRRIGIYYDGGEVTAS 150
+A+ +P P F + TV F+V+ + + F+ ++S NPN +IGIYYD +V AS
Sbjct: 39 WAILQPSKPRFVLQDATVFNFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYAS 98
Query: 151 FNGTELCRGGFPAL--YQGHR 169
+ ++ P L YQGH+
Sbjct: 99 YRSQQITLPS-PMLTTYQGHK 118
>AT4G09590.1 | chr4:6066128-6066763 FORWARD LENGTH=212
Length = 211
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 90 ILYAVFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTA 149
+++ + +PK P+F + TV F++ + ++ F++ + S N N IGIYYD A
Sbjct: 39 LVWIILQPKNPEFILQDTTVYAFNL-SQPNLLTSKFQITIASRNRNSNIGIYYDHLHAYA 97
Query: 150 SFNGTELCRGG-FPALYQGHRS-TVRPVILLAGETRLDSXXXXXXXXXXXXGFVPLTVWA 207
S+ ++ P YQ H+ +V +L + + G LT+
Sbjct: 98 SYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTICV 157
Query: 208 RVPIRIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCSFKL 253
+R K G + + C ++ + + N+ + L
Sbjct: 158 DGQVRWKVGTLTIGNYHLHVRCQAFINQADKAAGVHVGENTVKYTL 203
>AT2G35970.1 | chr2:15109007-15109642 FORWARD LENGTH=212
Length = 211
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 3/162 (1%)
Query: 94 VFKPKIPDFHVDRLTVTRFDVNATAATVSDAFEVEVTSTNPNRRIGIYYDGGEVTASFNG 153
+ +PK P+F + TV F++ + ++ F++ + S N N IGIYYD AS+
Sbjct: 43 ILQPKKPEFILQDTTVYAFNL-SQPNLLTSKFQITIASRNRNSNIGIYYDHLHAYASYRN 101
Query: 154 TELCRGG-FPALYQGHR-STVRPVILLAGETRLDSXXXXXXXXXXXXGFVPLTVWARVPI 211
++ P YQ H+ ++V +L + + G LT+ +
Sbjct: 102 QQITLASDLPPTYQRHKENSVWSPLLYGNQVPIAPFNAVALGDEQNSGVFTLTICVDGRV 161
Query: 212 RIKFGAIKLWKMTGKATCNLVVDNLVAGRQIRIRSNSCSFKL 253
R K G + + C ++ + + N+ + L
Sbjct: 162 RWKVGTLTIGNYHLHVRCQAFINQADKAAGVHVGENTVKYTL 203
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,286,170
Number of extensions: 140171
Number of successful extensions: 337
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 330
Number of HSP's successfully gapped: 16
Length of query: 255
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 159
Effective length of database: 8,474,633
Effective search space: 1347466647
Effective search space used: 1347466647
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)