BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0676600 Os04g0676600|AK072874
(433 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721 134 1e-31
AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364 125 3e-29
AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314 123 2e-28
AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791 92 4e-19
AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781 89 3e-18
AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714 78 1e-14
AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362 60 2e-09
AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353 59 5e-09
AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345 59 5e-09
AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334 58 9e-09
AT5G06250.2 | chr5:1892714-1894058 REVERSE LENGTH=283 54 1e-07
AT2G36080.1 | chr2:15148612-15151411 REVERSE LENGTH=245 54 2e-07
AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334 54 2e-07
AT1G01030.1 | chr1:11864-12940 REVERSE LENGTH=359 54 2e-07
AT2G46870.1 | chr2:19261313-19262245 FORWARD LENGTH=311 52 6e-07
AT3G61970.1 | chr3:22951829-22952728 FORWARD LENGTH=300 52 8e-07
AT1G51120.1 | chr1:18938091-18939149 FORWARD LENGTH=353 51 1e-06
AT1G50680.1 | chr1:18777601-18778614 REVERSE LENGTH=338 51 1e-06
AT3G11580.1 | chr3:3649165-3651271 REVERSE LENGTH=268 50 2e-06
>AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721
Length = 720
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%)
Query: 291 REYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYR 350
+ R +L+K L SDVGN+GRIV+PK++AE HLP L R+G+ L M+D WN +YR
Sbjct: 566 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYR 625
Query: 351 FWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKAIKPNVIMP 406
FWPNNKSRMY+LE+TG FVK + LQ GD +IY + K ++RG K +P+ P
Sbjct: 626 FWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQPSGQKP 681
>AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364
Length = 363
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 288 FNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNF 347
F+ ++ RV+ KEL NSDVG++GRIV+PKRDAEA+LP L +EG++++M D +W+F
Sbjct: 162 FDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSWSF 221
Query: 348 KYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKL 391
KY+FW NNKSRMYVLE+TG FVKQ+ + GD IY+ ES+ L
Sbjct: 222 KYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYE-DESKNL 264
>AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314
Length = 313
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 77/112 (68%)
Query: 287 RFNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWN 346
+ + R+ R + +KEL NSDV ++ R+++PK+ AEAHLPAL +EG+ ++M+D W
Sbjct: 82 KIDPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWT 141
Query: 347 FKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKA 398
FKYR+WPNN SRMYVLE+TG FV H LQ GD ++Y+ S V++ KA
Sbjct: 142 FKYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKA 193
>AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791
Length = 790
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
+ K L+ SD G IGR+V+PK AEA+ P + Q EG+ LK+ D + W F++R+WPNN
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGRE-WTFQFRYWPNN 352
Query: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKA 398
SRMYVLE ++ +LQ GD + KL++ KA
Sbjct: 353 NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKA 395
>AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781
Length = 780
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
+ K L+ SD G IGR+V+PK AEA+ P + EG+ LK+ D K + W F++RFWPNN
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDIKGKE-WVFQFRFWPNN 343
Query: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKA 398
SRMYVLE ++ LQ GD ++ KLV+ KA
Sbjct: 344 NSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKA 386
>AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714
Length = 713
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYRFWPNN 355
+ K L+ +D G R+V+PK+ AEA LP L +GV L + D + W F++RFWP++
Sbjct: 327 LFEKILSATDTGK--RLVLPKKYAEAFLPQLSHTKGVPLTVQD-PMGKEWRFQFRFWPSS 383
Query: 356 KSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRGEKA 398
K R+YVLE F++ LQ GD I + KL++ KA
Sbjct: 384 KGRIYVLEGVTPFIQTLQLQAGDTVIFSRLDPERKLILGFRKA 426
>AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 291 REYRVILRKELTNSDVGNIGRIVMPKRDAEAH--LPALHQR--------EGVMLKMDDFK 340
R V+ K +T SDVG + R+V+PK+ AE H LPA+ +GV++ ++D +
Sbjct: 189 RAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLED-R 247
Query: 341 LETTWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYKSS 386
W F+Y +W N S+ YVL + FVK+ L+ GD+ +S+
Sbjct: 248 TGKVWRFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCFERST 292
>AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353
Length = 352
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 295 VILRKELTNSDVGNIGRIVMPKRDAEAHL----PALHQREGVMLKMDDFKLETTWNFKYR 350
V+ K +T SDVG + R+V+PK+ AE H P+ +GV++ +D + W F+Y
Sbjct: 186 VLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGK-VWRFRYS 244
Query: 351 FWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYKSSESEK 390
+W N S+ YVL + FVK+ L+ GD+ +S+ E+
Sbjct: 245 YW--NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLER 283
>AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345
Length = 344
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 280 NSANSTIRFNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQR---EGVMLKM 336
N ST F R + K +T SDVG + R+V+PK AE H P +GV+L
Sbjct: 173 NDGVSTTGF--RSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNF 230
Query: 337 DDFKLETTWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRG 395
+D + W F+Y +W N S+ YVL + FVK+ L+ GD+ +S+ ++ + G
Sbjct: 231 EDVNGK-VWRFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
Query: 396 EKA 398
K+
Sbjct: 288 WKS 290
>AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334
Length = 333
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 266 LDQTPASEPSSMSHNSANSTIRFNCREYRV-ILRKELTNSDVGNIGRIVMPKRDAEAHLP 324
LDQ E + + +S++ T F E R + K LT SDVG + R+V+PK+ AE P
Sbjct: 8 LDQ----ELAEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP 63
Query: 325 ALHQREGVMLKMDDFKLETTWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIY 383
+ G +L D K W F+Y +W N S+ YV+ + FVK+ L GD Y
Sbjct: 64 LEDNQNGTVLDFQD-KNGKMWRFRYSYW--NSSQSYVMTKGWSRFVKEKKLFAGDTVSFY 120
Query: 384 K 384
+
Sbjct: 121 R 121
>AT5G06250.2 | chr5:1892714-1894058 REVERSE LENGTH=283
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLP------------ALHQREGVMLKMDDFKLET 343
+ K LT SDVG + R+V+PK+ AE + P +G++L +D +
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFED-ESGK 103
Query: 344 TWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGD-IFIIYKSSESEKLVV 393
+W F+Y +W N S+ YVL + FVK L GD +F S+S +L +
Sbjct: 104 SWRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFI 153
>AT2G36080.1 | chr2:15148612-15151411 REVERSE LENGTH=245
Length = 244
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 292 EYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQ-----REGVMLKMDDFKLETTWN 346
E + K LT SDVG + R+V+PK+ AE + P +G++L +D + W
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFED-EEGKPWR 91
Query: 347 FKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYK 384
F+Y +W N S+ YVL + +VK+ L GD+ + ++
Sbjct: 92 FRYSYW--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR 128
>AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 264 DELDQTPASEPSSMSHNSA----NSTIRFNCREYRVILRKELTNSDVGNIGRIVMPKRDA 319
+ELDQ + + +A + + + ++ K +T SDVG + R+V+PK A
Sbjct: 146 EELDQRKRNRDGNGKETTAFALASMVVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQA 205
Query: 320 EAHLPA-LHQR----EGVMLKMDDFKLETTWNFKYRFWPNNKSRMYVL-ESTGGFVKQHV 373
E H P L +G++L +D + W F+Y +W N S+ YVL + FVK+
Sbjct: 206 EKHFPLPLGNNNVSVKGMLLNFEDVNGK-VWRFRYSYW--NSSQSYVLTKGWSRFVKEKR 262
Query: 374 LQTGDIFIIYKSSESEKLVVRGEKA 398
L GD+ +S++ ++ G K+
Sbjct: 263 LCAGDLISFKRSNDQDQKFFIGWKS 287
>AT1G01030.1 | chr1:11864-12940 REVERSE LENGTH=359
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLP--ALHQREGVMLKMDDFKLETTWNFKYRFWP 353
+ K +T SDVG + R+V+PK+ AE + P + + + G +L D + W F+Y +W
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQD-RNGKMWRFRYSYW- 112
Query: 354 NNKSRMYVL-ESTGGFVKQHVLQTGDIFI----IYKSSESEKLVV 393
N S+ YV+ + FVK+ L GDI I SE KL +
Sbjct: 113 -NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYI 156
>AT2G46870.1 | chr2:19261313-19262245 FORWARD LENGTH=311
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLP--ALHQREGVMLKMDDFKLETTWNFKYRFWP 353
+ K +T SDVG + R+V+PK+ AE P + +G++L +D +W F+Y +W
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLT-GKSWRFRYSYW- 91
Query: 354 NNKSRMYVL-ESTGGFVKQHVLQTGDI 379
N S+ YV+ + FVK L GDI
Sbjct: 92 -NSSQSYVMTKGWSRFVKDKKLDAGDI 117
>AT3G61970.1 | chr3:22951829-22952728 FORWARD LENGTH=300
Length = 299
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALH-----QREGVMLKMDDFKLETTWNFKYR 350
+ K +T SDVG + R+V+PK+ AE + P + +G++L +D + +W F+Y
Sbjct: 22 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFED-RSGNSWRFRYS 80
Query: 351 FWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFIIYKSS-ESEKLVV 393
+W N S+ YV+ + FVK L GDI + S +KL +
Sbjct: 81 YW--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYI 123
>AT1G51120.1 | chr1:18938091-18939149 FORWARD LENGTH=353
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 288 FNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPAL-------HQREGVMLKMDDF- 339
F+C + + +KELT SDVG + R+V+PK+ A ++P + EGV F
Sbjct: 172 FSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFY 228
Query: 340 -KLETTWNFKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIY 383
+ W F+Y +W +++S ++ GFVK+ L+ DI + Y
Sbjct: 229 DRAMRQWKFRYCYWRSSQSFVFT-RGWNGFVKEKNLKEKDIIVFY 272
>AT1G50680.1 | chr1:18777601-18778614 REVERSE LENGTH=338
Length = 337
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 288 FNCREYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPAL-----HQREG-VMLKMDDFKL 341
F+C + + +KELT SDVG + R+V+PK+ A ++P + + EG ++ ++D ++
Sbjct: 151 FSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEV 207
Query: 342 ------ETTWNFKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIYKSSESEKLVVRG 395
W F+Y +W +++S ++ FVK+ L+ D+ Y V+
Sbjct: 208 VFYDRAMRQWKFRYCYWKSSQSFVFT-RGWNSFVKEKNLKEKDVIAFYTCDVPNN--VKT 264
Query: 396 EKAIKPNVIMPIVDCSCKNDLNNSEECGFAI---SLLTKKT 433
+ + N +M V C N +EE + S+ KKT
Sbjct: 265 LEGQRKNFLMIDVHCFSDNGSVVAEEVSMTVHDSSVQVKKT 305
>AT3G11580.1 | chr3:3649165-3651271 REVERSE LENGTH=268
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQ-------------REGVMLKMDDFKLE 342
+ K LT SDVG + R+V+PK+ AE + P + +G++L +D +
Sbjct: 28 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED-ESG 86
Query: 343 TTWNFKYRFWPNNKSRMYVL-ESTGGFVKQHVLQTGDIFII 382
W F+Y +W N S+ YVL + +VK L GD+
Sbjct: 87 KCWKFRYSYW--NSSQSYVLTKGWSRYVKDKHLDAGDVVFF 125
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,062,809
Number of extensions: 387638
Number of successful extensions: 1038
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 1022
Number of HSP's successfully gapped: 19
Length of query: 433
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 332
Effective length of database: 8,337,553
Effective search space: 2768067596
Effective search space used: 2768067596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)