BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0672200 Os04g0672200|AK099725
(959 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35510.1 | chr2:14916898-14919198 REVERSE LENGTH=569 182 6e-46
AT1G32230.1 | chr1:11613427-11615894 FORWARD LENGTH=590 170 3e-42
AT1G23550.1 | chr1:8350912-8352232 FORWARD LENGTH=324 150 4e-36
AT1G70440.1 | chr1:26549354-26550520 REVERSE LENGTH=306 140 3e-33
AT5G62520.1 | chr5:25098071-25099264 FORWARD LENGTH=310 106 5e-23
AT3G47720.1 | chr3:17592771-17593966 FORWARD LENGTH=317 106 5e-23
>AT2G35510.1 | chr2:14916898-14919198 REVERSE LENGTH=569
Length = 568
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 240/482 (49%), Gaps = 59/482 (12%)
Query: 61 YLKSGVPSRVMFYKQGSWHNFPEQIMKSLIEEFRSNKSSVVAVMDDEPVLVDFLSMTLVN 120
Y K+GVP RVMF++ G W + P+ I+ + + + ++++ L+DFL M ++
Sbjct: 82 YKKTGVPKRVMFHENGEWIDLPDHILCDIRNDLEAKRATIEFNWCGRHFLLDFLHMYRLD 141
Query: 121 LKSRKQRSVAWFDDTGKCFYPSLFFDEEADEVAKV-GGDFEGATQ-----GIMLDKVANS 174
L++ + +AW D GKCF+P F E D + G D E Q I +D +
Sbjct: 142 LETGVKTQLAWIDIAGKCFFPETFDTLERDGCHHIRGEDPEQHDQREIKLHIEIDVNSGE 201
Query: 175 PPEVVKQVV-------------LESSPPVPQKPATADILRKKIA-SVERGSEGFLFAQDL 220
P + VV ++ S P A+ D +++ +VE+ + D
Sbjct: 202 LPRLNLNVVTDESGDNMDDFQAVQRSSNGPNDEASEDSCSRELDDAVEKWDKT---ETDR 258
Query: 221 FLSGMGPF-----------------ATPNNILHIHRYSPNDITAQCRLQAFEKQMMSTKE 263
F SG+ P AT ++ + Y + A+ RL F+KQ TK+
Sbjct: 259 F-SGVKPAEEELDKDAVKQMFALGAATLGHVESLDVYQFSSEIAKARLSLFQKQADITKK 317
Query: 264 ERGDANVRYGWLGSRKNDIVRILINGFGNNGKPAEKAGLSAGVYLSPEDRAFSSVGLCDV 323
RGDAN+RY W+ ++K + ++++G G G +K+ GV+ + + + S CD+
Sbjct: 318 HRGDANIRYAWVPAKKEVLSAVMMHGLGVGGAFIKKSMYGVGVHAA--NCPYFSARYCDI 375
Query: 324 DEKGVQYMLLCRLILGNMEAVMPGSQDSFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIR 383
D+ GV++M+LCR+I+GNME + + F + YD+GVDD +PK Y++W +++THI
Sbjct: 376 DDNGVRHMVLCRVIMGNMEPLRGDNTQYFTGGEEYDNGVDDVESPKHYLIWNMNMNTHIY 435
Query: 384 LEYLVSFRLS-------------SKVRNYLLGLKGLWFHPS--PKEVAVDISTLVPIMSG 428
E++VSF+LS S+ + L L+G PS P V+ + + S
Sbjct: 436 PEFVVSFKLSIPNAEGNILPTTQSRHESSGLTLEGPKGSPSNEPGRVS-NGGSGSEKNSS 494
Query: 429 NAEGPTSPWISFRVLFAMIQENISSVARELLFHHYEELKENKITREEMVKQMIILVGEKL 488
++ P SP + F +LF I I+ +L+ Y+EL+E K++R+E K + ++VG+
Sbjct: 495 SSRRPRSPIMPFPLLFKAISSKIARKDMDLIIAGYQELREKKVSRKEFYKTLSMIVGDDD 554
Query: 489 LL 490
LL
Sbjct: 555 LL 556
>AT1G32230.1 | chr1:11613427-11615894 FORWARD LENGTH=590
Length = 589
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 26/285 (9%)
Query: 234 ILHIHRYSPNDITAQCRLQAFEKQMMSTKEERGDANVRYGWLGSRKNDIVRILINGFGNN 293
+L + R+S A+ RL F+KQ+ TK+ RGDANVRY WL +++ + +++ G G
Sbjct: 294 VLDVGRFSSE--IAEARLALFQKQVEITKKHRGDANVRYAWLPAKREVLSAVMMQGLGVG 351
Query: 294 GKPAEKAGLSAGVYLSPEDRAFSSVGLCDVDEKGVQYMLLCRLILGNMEAVMPGSQDSFP 353
G K+ G++L+ D + S CDVDE GV+YM+LCR+I+GNME + F
Sbjct: 352 GAFIRKSIYGVGIHLTAADCPYFSARYCDVDENGVRYMVLCRVIMGNMELLRGDKAQFFS 411
Query: 354 SSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRLS----------SKVRNYLLGL 403
+ YD+GVDD +PK Y++W +++THI E++V F+LS +K N + L
Sbjct: 412 GGEEYDNGVDDIESPKNYIVWNINMNTHIFPEFVVRFKLSNLPNAEGNLIAKRDNSGVTL 471
Query: 404 KGLWFHPSPKEVAVDISTLVPIM---SGNAEG-----PTSPWISFRVLFAMIQENISSVA 455
+G PK++ + + S N+ G P SPW+ F LFA I ++
Sbjct: 472 EG------PKDLPPQLESNQGARGSGSANSVGSSTTRPKSPWMPFPTLFAAISHKVAEND 525
Query: 456 RELLFHHYEELKENKITREEMVKQMIILVGEKLLLETLKRLHYCP 500
L+ Y++L++ K+TR E V+++ ++VG+ LL T+ L P
Sbjct: 526 MLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQNQP 570
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 61 YLKSGVPSRVMFYKQGSWHNFPEQIMKSLIEEFRSNKSSVVAVMDDEPVLVDFLSMTLVN 120
+ K+G+ RVM Y+ G W++ PE ++ ++ E +++ + ++DFL M ++
Sbjct: 83 FKKTGIAKRVMMYENGEWNDLPEHVICAIQNELEEKSAAIEFKLCGHSFILDFLHMQRLD 142
Query: 121 LKSRKQRSVAWFDDTGKCFYPSLFFDEEADE 151
+++ + +AW D+ GKCF+P ++ E+DE
Sbjct: 143 METGAKTPLAWIDNAGKCFFPEIY---ESDE 170
>AT1G23550.1 | chr1:8350912-8352232 FORWARD LENGTH=324
Length = 323
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 148/279 (53%), Gaps = 32/279 (11%)
Query: 221 FLSGMGPFATPNNILHIHRYSPND-ITAQCRLQAFEKQMMST-KEERGDANVRYGWLGSR 278
LSGMG ++ I+ I + S IT + + AF + ++ GDANV+YGW
Sbjct: 62 LLSGMGVVSSDTTIVTISKNSSERGITTRAKFLAFRIFTDAVARKHGGDANVKYGWYAGS 121
Query: 279 KNDIVRILINGFGNN--GKPAEKAGLSA-GVYLSPEDRAFSSVGLCDVDEKGVQYMLLCR 335
+++I RI+ GF N GK G G++L P + + + DE+G++Y+LLCR
Sbjct: 122 RDEIQRIISYGFSNRDVGKFENDGGSHGIGIHLVPSKCSLLAASATEQDEEGLRYLLLCR 181
Query: 336 LILGNMEAVMPGSQDSFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRLSSK 395
+ILG E ++ GS+ S+PSS +DSGVDD NP+ YV+W ++++ I Y+VSFR
Sbjct: 182 VILGKPEIIISGSKQSYPSSAEFDSGVDDLHNPRNYVIWSCNMNSCILPSYIVSFR---- 237
Query: 396 VRNYLLGLKGLWFHPSPKEVAVDISTLVPIMSGNAEGPTSPWISFRVLFAMIQENISSVA 455
SP+ L G A P+SPW+SF L +M+ ++
Sbjct: 238 ---------------SPR--------LRVSRGGFASRPSSPWVSFASLMSMLSTSMDPSR 274
Query: 456 RELLFHHYEELKENKITREEMVKQMIILVGEKLLLETLK 494
L+ Y++ ++ KI R+++V++M + G+ LL E +K
Sbjct: 275 MNLIIRTYDDFRKRKIRRDQLVRKMREVAGDNLLAEIIK 313
>AT1G70440.1 | chr1:26549354-26550520 REVERSE LENGTH=306
Length = 305
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 152/282 (53%), Gaps = 36/282 (12%)
Query: 218 QDLFLSGMGPFATPNNILHIHR-YSPNDITAQCRLQAFEKQMMSTKEER-GDANVRYGWL 275
++ FLSGMG FAT I+ + + + IT + + F+ + K + G AN+RYGW
Sbjct: 51 KNCFLSGMGSFATETTIVTVRKILTQRLITTKAKFAVFKLFTEAMKRKNNGYANIRYGWY 110
Query: 276 GSRKNDIVRILINGFGNNG-KPAEK--AGLSAGVYLSPEDRAFSSVGLCDVDEKGVQYML 332
K +I R++ GF N K E G++L + ++ + + DE+G++ +L
Sbjct: 111 SGSKEEIDRVITYGFSNREIKKVENDVGSHGVGIHLVHHRYSLAAALVGEGDEEGIKNIL 170
Query: 333 LCRLILGNMEAVMPGSQDSFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRL 392
LCR+ILG E ++ GS+ S+PSS+ +DSGVD+ NP+ YV+W +++++I Y+VSF+
Sbjct: 171 LCRVILGKPEQIVTGSKQSYPSSNQFDSGVDNLENPRKYVIWSCNMNSYILPTYIVSFK- 229
Query: 393 SSKVRNYLLGLKGLWFHPSPKEVAVDISTLVPIMSGNAEGPTSPWISFRVLFAMIQENIS 452
S L+ + G A SP +SF VL +++ +++
Sbjct: 230 ---------------------------SHLLRGLIGRAR---SPCVSFSVLMSILSKSLD 259
Query: 453 SVARELLFHHYEELKENKITREEMVKQMIILVGEKLLLETLK 494
+ L+ Y++ ++ K+ RE++V+++ +VG+ LL + LK
Sbjct: 260 AARMNLILTSYDDFRKRKLRREQLVRKIREVVGDNLLFKILK 301
>AT5G62520.1 | chr5:25098071-25099264 FORWARD LENGTH=310
Length = 309
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 131/271 (48%), Gaps = 46/271 (16%)
Query: 233 NILHIHRYSPNDITAQCRL---QAFEKQMMSTKEERGDANVRYGWLGSRKNDIVRILING 289
IL + R ++ ++ +L Q F++ + G A V+YGW K+++ I G
Sbjct: 68 QILSVLRNGFRNVGSRAKLKTFQVFQEAVQMKHGGDGGAKVKYGWCSVSKHELKTIFEYG 127
Query: 290 FGNNGKPAEKAG-LSAGVYLSPEDRAFSSVGLCDVD-----EKGVQYMLLCRLILGNMEA 343
F +P G G+YLSP++ C D E G++++LLCR++LG E
Sbjct: 128 FS---EPLRNDGSFGRGLYLSPDNSPLD----CLKDSASESEDGMRFLLLCRVLLGKSEI 180
Query: 344 VMPGSQDSFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRLSSKVRNYLLGL 403
V GS S PSS +DSGVDD + K Y++W +H++TH+ E+LV + +
Sbjct: 181 VPQGSTRSCPSSPEFDSGVDDLVSTKKYIVWSTHMNTHVLPEFLVCIKAPFNLTR----- 235
Query: 404 KGLWFHPSPKEVAVDISTLVPIMSGNAEGPTSPWISFRVLFAMIQENISSVARELLFHHY 463
SPK + SPW++F VL + + + ++ HY
Sbjct: 236 -------SPKRL------------------RSPWMAFPVLIKALSKFLPPSQILVIQKHY 270
Query: 464 EELKENKITREEMVKQMIILVGEKLLLETLK 494
++ + +ITR E+++++ + G+KLL+ +K
Sbjct: 271 KDQQNRRITRSELIQRVRSITGDKLLVHIIK 301
>AT3G47720.1 | chr3:17592771-17593966 FORWARD LENGTH=317
Length = 316
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 65/264 (24%)
Query: 248 QCRLQAFEKQMMSTKEERGD-----------ANVRYGWLGSRKNDIVRILINGFGNNGKP 296
Q +L+AF+ S ++ G A V+YG G K ++ IL+ GF NN
Sbjct: 91 QAKLKAFQIYAESVAKKSGSCCGNKAAVAEAARVKYGCCGVEKEELKAILMYGFSNNA-- 148
Query: 297 AEKAGLSAGVYLSPEDRAFSSVGLCDVD------EKGVQYMLLCRLILGNMEAVMPGSQD 350
+ LSP++ C +D E G+ ++L R+I+G E V SQ
Sbjct: 149 ---------LCLSPDNAPLQ----CMIDPSSSCNEDGISFLLFSRIIMGKSEVVCSTSQ- 194
Query: 351 SFPSSDIYDSGVDDCSNPKCYVMWPSHLSTHIRLEYLVSFRLSSKVRNYLLGLKGLWFHP 410
S+PSS +DSGVD ++P Y++W +H++TH+ E++V + S ++
Sbjct: 195 SYPSSMEFDSGVDSLTSPNKYIIWSTHMNTHVLPEFVVCIKTPSILKR------------ 242
Query: 411 SPKEVAVDISTLVPIMSGNAEGPTSPWISFRVLFAMIQENISSVARELLFHHYEELKENK 470
+ P SPWISF VL I + ++ L+ HY+E ++ +
Sbjct: 243 --------------------KNPKSPWISFPVLINSISKFLNQSQIRLIHKHYKEHQDRR 282
Query: 471 ITREEMVKQMIILVGEKLLLETLK 494
I+R E+++++ + G+ LL++ +K
Sbjct: 283 ISRCELIQRLRSITGDSLLVQIIK 306
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.131 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,395,146
Number of extensions: 1031459
Number of successful extensions: 2107
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2100
Number of HSP's successfully gapped: 9
Length of query: 959
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 851
Effective length of database: 8,145,641
Effective search space: 6931940491
Effective search space used: 6931940491
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 117 (49.7 bits)