BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0670000 Os04g0670000|AK071792
(199 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202 132 1e-31
AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219 122 1e-28
AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250 96 8e-21
AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272 85 3e-17
AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204 75 2e-14
AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258 74 5e-14
AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256 73 1e-13
AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276 73 1e-13
AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272 70 7e-13
AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268 68 2e-12
AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226 67 5e-12
AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207 62 2e-10
AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243 58 4e-09
>AT2G15280.1 | chr2:6640191-6641414 FORWARD LENGTH=202
Length = 201
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
W+ R WFLFE+ GYSF + N LL V ILF WAKSA
Sbjct: 20 WKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQL 79
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
E+++ V AD VWIN VLAV +I + R+ +V ++LW VS++G NFL
Sbjct: 80 PNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFL 139
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVDEKIGMAHSVLS--------RHLDTIISKTGESTKQ 195
T++Y+GV+ SLL+P LYE+YQD +DEK+ + H V+ R L II+K K+
Sbjct: 140 TILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKIIAKPTNKIKK 199
Query: 196 KK 197
+
Sbjct: 200 MQ 201
>AT3G19460.2 | chr3:6747913-6748904 FORWARD LENGTH=219
Length = 218
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 91/183 (49%), Gaps = 34/183 (18%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR R WFLFERAGY+ S ++N LLLLVAI F WAKSA+
Sbjct: 12 WRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPV 71
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDR----------------SVFI--- 124
E+ + KAAD VWIN VL++ DI I R+ +F+
Sbjct: 72 PNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTICCIFLFLH 131
Query: 125 ---------------KVILILWVVSYIGMLFNFLTLIYIGVMFSLLVPPLYEKYQDQVDE 169
+V L+LW +SY+G L N LTL+YIGV+ SL P +YEKYQD +DE
Sbjct: 132 VMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDE 191
Query: 170 KIG 172
K+
Sbjct: 192 KVN 194
>AT3G10915.5 | chr3:3416101-3417497 REVERSE LENGTH=250
Length = 249
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WRRR+ W +FE +G F SV ++ LL+++ I F A+ ++
Sbjct: 69 WRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSL 128
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIK-VILILWVVSYIGMLFNF 142
+S+ +V AA + +N +L + HD+ + D +F K V++ LW++S IG +
Sbjct: 129 PELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISL 188
Query: 143 LTLIYIGVMFSLLVPPLYEKYQDQVDEKIGMAHSVLSRHL----DTIISKTGESTKQKK 197
TL+YIG + S+ +P LY KYQ +VD+ G H LS H + +IS+ S + K
Sbjct: 189 CTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDK 247
>AT1G64090.2 | chr1:23789395-23790669 FORWARD LENGTH=272
Length = 271
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR + W LFE Y+ ++ + +L +A+LF W+ +++
Sbjct: 86 WRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHI 145
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
+ + VV + A + IN+ V DIA RD F+ VI LWV+S +G NFL
Sbjct: 146 PEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFL 205
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVDE 169
TLIYI + +P LYEKY+D+VD+
Sbjct: 206 TLIYIATVLLFTIPVLYEKYEDKVDD 231
>AT3G54120.1 | chr3:20041269-20042133 REVERSE LENGTH=204
Length = 203
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR++N W +FE Y+ +++++ LLLL++ILF W+KSAS
Sbjct: 30 WRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPL 89
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
++S+ + E+A+ + +NK+L V HDIA+ RD ++ KV + L+++S IG L +F
Sbjct: 90 PEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQ 149
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQV 167
TL + V+ + VP YE+Y+D +
Sbjct: 150 TLCHTSVLVVMTVPAFYERYEDYI 173
>AT5G41600.1 | chr5:16636230-16637472 FORWARD LENGTH=258
Length = 257
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 8/184 (4%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR + W LFE Y + + + + +A LF W+ + +
Sbjct: 74 WRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHI 133
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
+ + + + + IN+ L + +IA +D FI VI LWV+S IG +NFL
Sbjct: 134 PEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFL 193
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVD-------EKIGMAHSVLSRH-LDTIISKTGESTKQ 195
TL Y + +P LYEKY+D+VD +I ++VL L +ISK
Sbjct: 194 TLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALN 253
Query: 196 KKTE 199
KK +
Sbjct: 254 KKKD 257
>AT2G46170.1 | chr2:18965410-18966940 FORWARD LENGTH=256
Length = 255
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR + W LFE Y S++ + +L + LF W+ + +
Sbjct: 74 WRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQI 133
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
V + A +N+ + IA+ RD F+ V++ LW++S +G FNFL
Sbjct: 134 PEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFL 193
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVD 168
TL+YI + VP LYEK++D+VD
Sbjct: 194 TLVYICFVILHTVPMLYEKHEDKVD 218
>AT4G23630.1 | chr4:12318070-12319574 FORWARD LENGTH=276
Length = 275
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
W+ + W +FE Y +++ + +++++A+LF W+ +
Sbjct: 95 WKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKI 154
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
+ + + + A + IN+ + +IA RD F+ I LWV+S +G FNFL
Sbjct: 155 PEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFL 214
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVD 168
TL YI ++ VP Y+KY+D+VD
Sbjct: 215 TLAYIALVLLFTVPLAYDKYEDKVD 239
>AT4G11220.1 | chr4:6838176-6839578 REVERSE LENGTH=272
Length = 271
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
W+ + W LFE Y +++ + +++ +A+LF W+ +
Sbjct: 91 WKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKI 150
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
+ + + + A + IN+ ++ +IA RD F+ I LWV+S +G ++FL
Sbjct: 151 PEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFL 210
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVD 168
TL YI ++ VP Y+KY+D+VD
Sbjct: 211 TLAYIALVLLFTVPLFYDKYEDKVD 235
>AT3G10260.3 | chr3:3171413-3172568 REVERSE LENGTH=268
Length = 267
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWA-------KSASXX 76
WR + W LFE + F S++ ALLL + F W+ +S S
Sbjct: 87 WRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRV 146
Query: 77 XXXXXXXXXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYI 136
V V K +R L+++ D+A K + F+ ++ LWV + +
Sbjct: 147 PRLVLPKDFFAEVGVAVGKEVNRGLLFL-------QDLACKGNLKQFLMAVIGLWVAAMV 199
Query: 137 GMLFNFLTLIYIGVMFSLLVPPLYEKYQDQVD 168
G NFLT++YIG + + +P LYE+Y+D+VD
Sbjct: 200 GSCCNFLTVLYIGFVGAHTMPVLYERYEDEVD 231
>AT3G18260.1 | chr3:6260328-6261504 REVERSE LENGTH=226
Length = 225
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WR WFL E Y+F +++ +A + + F W+ ++
Sbjct: 45 WREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPL- 103
Query: 84 XXXEVSDVVVEKAADRAL-----VWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGM 138
+ +VV+++++ + L V N++L D+A RD +F + L++VS IG
Sbjct: 104 ----IPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGT 159
Query: 139 LFNFLTLIYIGVMFSLLVPPLYEKYQDQVDEKIGM---AHSVLSRHLDT-IISKTGESTK 194
FNF+ L++IG + +P +YE Y+D VD G L + +DT ++SK T
Sbjct: 160 YFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTV 219
Query: 195 QKK 197
+ K
Sbjct: 220 KNK 222
>AT2G23640.1 | chr2:10057554-10059042 FORWARD LENGTH=207
Length = 206
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%)
Query: 24 WRRRNXXXXXXXXXXXXWFLFERAGYSFPSVMANALLLLVAILFFWAKSASXXXXXXXXX 83
WRR+ W L G++ ++++ + +V+++F W
Sbjct: 22 WRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPEL 81
Query: 84 XXXEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFL 143
EVS+ V + + + +++ + + + VF + +L W++S IG L +F
Sbjct: 82 SGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFH 141
Query: 144 TLIYIGVMFSLLVPPLYEKYQDQVDEKIG 172
T ++IG++ L VP L+E+Y DQ+ + +G
Sbjct: 142 TCLFIGLVMGLTVPKLWEEYGDQIQKHLG 170
>AT4G01230.1 | chr4:516264-517408 REVERSE LENGTH=243
Length = 242
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 95 KAADRALVWINKVLAVGHDIAIKRDRSVFIKVILILWVVSYIGMLFNFLTLIYIGVMFSL 154
+AA +N A IA++RD F+ ++ LW+VS IG F+FL+L+YI +
Sbjct: 142 QAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIH 201
Query: 155 LVPPLYEKYQDQVD 168
VP LYEKY+D++D
Sbjct: 202 TVPMLYEKYEDEID 215
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,858,743
Number of extensions: 87085
Number of successful extensions: 343
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 333
Number of HSP's successfully gapped: 15
Length of query: 199
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 106
Effective length of database: 8,556,881
Effective search space: 907029386
Effective search space used: 907029386
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 109 (46.6 bits)