BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0662200 Os04g0662200|AK107934
(143 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34750.1 | chr4:16577566-16578018 FORWARD LENGTH=151 84 2e-17
AT1G19840.1 | chr1:6872794-6873255 REVERSE LENGTH=154 84 4e-17
AT1G75590.1 | chr1:28383250-28383714 REVERSE LENGTH=155 79 7e-16
AT5G10990.1 | chr5:3476884-3477330 FORWARD LENGTH=149 77 3e-15
AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147 59 8e-10
AT2G21210.1 | chr2:9085513-9085809 REVERSE LENGTH=99 52 1e-07
AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190 51 2e-07
AT5G50760.1 | chr5:20644780-20645331 FORWARD LENGTH=184 51 2e-07
AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163 49 7e-07
AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137 49 7e-07
AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161 49 8e-07
AT1G56150.1 | chr1:21017432-21017764 FORWARD LENGTH=111 49 1e-06
AT4G13790.1 | chr4:7999846-8000124 REVERSE LENGTH=93 49 1e-06
AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124 49 1e-06
AT5G53590.1 | chr5:21772107-21772535 FORWARD LENGTH=143 49 1e-06
AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171 48 2e-06
AT1G79130.1 | chr1:29771319-29771723 FORWARD LENGTH=135 48 2e-06
AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191 47 3e-06
AT4G38840.1 | chr4:18125174-18125473 REVERSE LENGTH=100 47 4e-06
AT4G34770.1 | chr4:16591352-16591666 FORWARD LENGTH=105 46 5e-06
AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179 46 5e-06
AT4G34790.1 | chr4:16594539-16594865 FORWARD LENGTH=109 46 6e-06
AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123 46 6e-06
AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122 46 6e-06
AT3G12830.1 | chr3:4079117-4079515 REVERSE LENGTH=133 45 1e-05
>AT4G34750.1 | chr4:16577566-16578018 FORWARD LENGTH=151
Length = 150
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 1 MAKCSKIRYIVWLRQTLXXXXXXXXXXXXXXXXXXXX----XXXCVGGASRRFVVRAAHL 56
M K +KI +V +RQ L VG RR+VVRA HL
Sbjct: 1 MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60
Query: 57 NHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLS---SPSSAAR----FV 109
NHP+FR LL +AEEEYGF A GP+A+PCDE LFE ++ ++ S SS+ R
Sbjct: 61 NHPIFRRLLAEAEEEYGF---ANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAA 117
Query: 110 TLEDIQXXXXXXXXXXXXXXXPLLRGIA 137
TLED++ PLL GIA
Sbjct: 118 TLEDLRRCSHVGLAKNNVESRPLLPGIA 145
>AT1G19840.1 | chr1:6872794-6873255 REVERSE LENGTH=154
Length = 153
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 1 MAKCSKIRYIVWLRQTL----XXXXXXXXXXXXXXXXXXXXXXXCVGGASRRFVVRAAHL 56
+ KCSKIR+IV LRQ L CVG RRFVVRA++L
Sbjct: 5 LVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVRASYL 64
Query: 57 NHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHL--SSPSSAARFVTLEDI 114
NHP+ LL QAEEE+GF A GP+ +PC+E +FE +R + S S ++RF +D+
Sbjct: 65 NHPIISNLLVQAEEEFGF---ANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDDL 121
Query: 115 QX----XXXXXXXXXXXXXXPLLRGIATDKAVW 143
Q PLL G+A +KA+W
Sbjct: 122 QKCNGGIKIKSKLDLMIESRPLLHGVA-EKAIW 153
>AT1G75590.1 | chr1:28383250-28383714 REVERSE LENGTH=155
Length = 154
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 1 MAKCSKIRYIVWLRQTL-----XXXXXXXXXXXXXXXXXXXXXXXCVGGASRRFVVRAAH 55
+ KCSKIR+IV LRQ L VG + RRFVVRA +
Sbjct: 5 LGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVVRATY 64
Query: 56 LNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHL--SSPSSAARFVTLED 113
LNHPV R LL QAEEE+GF + GP+ +PC+E +FE +R + S + + RF +D
Sbjct: 65 LNHPVLRNLLVQAEEEFGFVNQ---GPLVIPCEESVFEESIRFISRSDSTRSRRFTCPDD 121
Query: 114 IQXXXXXXXXXXX----XXXXPLLRGIATDKAVW 143
Q PLL G+ T+KAVW
Sbjct: 122 FQKNCHVVGIRSKLDLWIESRPLLHGV-TEKAVW 154
>AT5G10990.1 | chr5:3476884-3477330 FORWARD LENGTH=149
Length = 148
Score = 77.0 bits (188), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 1 MAKCSKIRYIVWLRQTL----XXXXXXXXXXXXXXXXXXXXXXXCVGGASRRFVVRAAHL 56
+ KCSKIR+IV LRQ L VG + RRFVV A +L
Sbjct: 5 IGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVLATYL 64
Query: 57 NHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSSPSSAARFVTLEDIQX 116
NHP+ LL +AEEE+GF A GP+ +PC+E +FE +R ++ S RF +D++
Sbjct: 65 NHPILMNLLVKAEEEFGF---ANQGPLVIPCEESVFEESIRFITRSS---RFTCTDDLKK 118
Query: 117 XX---XXXXXXXXXXXXPLLRGIATDKAVW 143
PLL G++ +W
Sbjct: 119 NRHGGIRSKLDLLMESRPLLHGVSEKAIIW 148
>AT1G20470.1 | chr1:7094325-7094765 FORWARD LENGTH=147
Length = 146
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSSPS 103
RRFV+ +L HP+F+ LL AEEE+G CGP+ +PCD GL +H+L L + S
Sbjct: 36 RRFVLPLDYLKHPIFQVLLEMAEEEFG---STICGPLQVPCDGGLMDHILMLLRNKS 89
>AT2G21210.1 | chr2:9085513-9085809 REVERSE LENGTH=99
Length = 98
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSSPS 103
RRFVV +L+HP F++LLR+AEEE+GF G + +PC E +F + LS+ S
Sbjct: 44 RRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPM--GGLTIPCTEQIFIDLASRLSTSS 98
>AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190
Length = 189
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSS 101
VG +R+ + +L+H F LLR+AEEE+GF G + +PC+ +FE +L+ +
Sbjct: 89 VGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQA---GILRIPCEVAVFESILKIMED 145
Query: 102 PSSAARFVTLE 112
S A T E
Sbjct: 146 NKSDAYLTTQE 156
>AT5G50760.1 | chr5:20644780-20645331 FORWARD LENGTH=184
Length = 183
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSS 101
VG +R VV+ LNHP+F+ LL AE EYG+ GPI LPC+ F L + S
Sbjct: 64 VGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRD---GPIVLPCEVDFFFKALADMKS 120
>AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163
Length = 162
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 44 GASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSSPS 103
G R +V + NHP+F ELLR+AE+EYGF + G I +PC FE V ++S S
Sbjct: 93 GDCHRVLVPIVYFNHPLFGELLREAEKEYGF---CHEGGITIPCLYSDFERVKTRIASGS 149
Query: 104 SAARF 108
S+ F
Sbjct: 150 SSRVF 154
>AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137
Length = 136
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHV 95
+RFVV + NHP+F +LLR+AEEEYGF G I +PC +F +V
Sbjct: 47 QRFVVPVFYFNHPLFMQLLREAEEEYGFEQK---GTITIPCHVEVFRYV 92
>AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161
Length = 160
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLR---- 97
VG RRF++ L+H +F+ LL +AEEEYGF + G + +PC+ F+++L+
Sbjct: 88 VGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGF---DHSGALTIPCEVETFKYLLKCIEN 144
Query: 98 HLSSPSSAARFVTLED 113
H +SA V E+
Sbjct: 145 HPKDDTSAEDPVETEE 160
>AT1G56150.1 | chr1:21017432-21017764 FORWARD LENGTH=111
Length = 110
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHL 99
VG RFVV A LNHPVF LL+Q+ +EYG+ G + +PC +FE +L L
Sbjct: 47 VGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQ---GVLRIPCHVLVFERILESL 101
>AT4G13790.1 | chr4:7999846-8000124 REVERSE LENGTH=93
Length = 92
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 6/55 (10%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGF--PSGAYCGPIALPCDEGLFEHVLRHL 99
+R++V +LN P F+ LLR+AEEE+GF P+G ++LPCDE F V +
Sbjct: 41 KRYLVPVCYLNKPSFQALLRKAEEEFGFNHPTGG----LSLPCDEAFFFTVTSQI 91
>AT1G76190.1 | chr1:28592225-28592596 FORWARD LENGTH=124
Length = 123
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVL 96
+RFV+ +LNHP+ + LL+ AE+E+G GP+ +PCD L +H++
Sbjct: 34 KRFVLPLDYLNHPMLQVLLQMAEDEFG---TTIDGPLKVPCDGSLMDHII 80
>AT5G53590.1 | chr5:21772107-21772535 FORWARD LENGTH=143
Length = 142
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHV 95
RFVV L+HP+F +LL++AE+EYGF + GPI +PC F+HV
Sbjct: 65 HRFVVPLVFLSHPLFLDLLKEAEKEYGF---KHDGPITIPCGVDEFKHV 110
>AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171
Length = 170
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 44 GASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSSPS 103
G +R +V + NHP+F ELLR+AEEE+GF + G I +PC F+ V + S S
Sbjct: 102 GDFQRVLVPIVYFNHPLFGELLREAEEEFGF---SQEGGITIPCPYSDFKRVQTRIESGS 158
Query: 104 SAARF 108
+F
Sbjct: 159 GFCKF 163
>AT1G79130.1 | chr1:29771319-29771723 FORWARD LENGTH=135
Length = 134
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHLSS 101
VG RFVV A LNHPVF LL ++ +EYG+ G + +PC+ +FE V+ L S
Sbjct: 57 VGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQK---GVLHIPCNVFVFEQVVESLRS 113
>AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191
Length = 190
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLR 97
VG RRF++ ++L+H +F+ LL +AEEE+GF G + +PC+ F+++L+
Sbjct: 88 VGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGF---DQSGALTIPCEVETFKYLLK 140
>AT4G38840.1 | chr4:18125174-18125473 REVERSE LENGTH=100
Length = 99
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLF 92
+RFVV ++L+ P F++LLR+AEEE+GF G + +PC E +F
Sbjct: 48 KRFVVPVSYLDQPSFQDLLRKAEEEFGFDHP--MGGLTIPCSEEIF 91
>AT4G34770.1 | chr4:16591352-16591666 FORWARD LENGTH=105
Length = 104
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 47 RRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLF 92
+RFV+ ++LNHP+F+ LL AEEE+GF G + +PC E F
Sbjct: 51 KRFVIPISYLNHPLFQGLLNLAEEEFGFDHP--MGGLTIPCTEDYF 94
>AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179
Length = 178
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLR 97
VG +R+ + +L+H F LLR+AEEE+GF G + +PC+ +FE +L+
Sbjct: 73 VGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQA---GVLRIPCEVSVFESILK 125
>AT4G34790.1 | chr4:16594539-16594865 FORWARD LENGTH=109
Length = 108
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 46 SRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVL 96
+RFVV ++LNHP+FRE L +AEEE GF G + +PC E F +++
Sbjct: 54 KKRFVVPISYLNHPLFREFLNRAEEECGFHHSM--GGLTIPCREESFLYLI 102
>AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123
Length = 122
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 43 GGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHV 95
G RFV+ + NHP+F +LL++AEEE+GF A G I +PC F +V
Sbjct: 40 GEEQERFVIPVMYFNHPLFGQLLKEAEEEFGF---AQKGTITIPCHVEEFRYV 89
>AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122
Length = 121
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 43 GGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHV 95
G +RF+V + NHP+F +LL++AE+EYGF G I +PC F +V
Sbjct: 37 GEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQK---GTITIPCHVEEFRYV 86
>AT3G12830.1 | chr3:4079117-4079515 REVERSE LENGTH=133
Length = 132
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 42 VGGASRRFVVRAAHLNHPVFRELLRQAEEEYGFPSGAYCGPIALPCDEGLFEHVLRHL 99
VG RFVV A LNHPVF LL ++ +EYG+ G + +PC +FE ++ L
Sbjct: 59 VGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQK---GVLQIPCHVLVFERIMESL 113
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,221,406
Number of extensions: 68336
Number of successful extensions: 267
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 25
Length of query: 143
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 54
Effective length of database: 8,666,545
Effective search space: 467993430
Effective search space used: 467993430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 106 (45.4 bits)