BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0661200 Os04g0661200|AK102842
(445 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42810.1 | chr5:17167073-17169337 FORWARD LENGTH=452 432 e-121
AT1G22100.1 | chr1:7798023-7800030 REVERSE LENGTH=442 411 e-115
AT1G58643.1 | chr1:21767342-21769456 FORWARD LENGTH=487 369 e-102
AT1G59312.1 | chr1:21839858-21841972 FORWARD LENGTH=487 369 e-102
AT1G58936.1 | chr1:21803600-21805714 FORWARD LENGTH=487 369 e-102
>AT5G42810.1 | chr5:17167073-17169337 FORWARD LENGTH=452
Length = 451
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/436 (50%), Positives = 295/436 (67%), Gaps = 13/436 (2%)
Query: 1 MEVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILK-DKGQPAPNCIV-- 57
ME++L E DA DW+Y+GEG ANL+L+Y GSSP +GKV+R++K + DK N +V
Sbjct: 1 MEMILEEKDASDWIYRGEGGANLVLAYAGSSPLFVGKVIRIQKARRNDKAIKNANGVVSV 60
Query: 58 FSSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGK 117
+S E+HLW + L+ S + L Q Y V+ LG HVD GVRV VSK F E K
Sbjct: 61 LTSDEQHLWRENNELISSPNKEVLEQRYVKNVIIPLLGPKHVDAGVRVSVSKEFLECVDK 120
Query: 118 NVLDNRPAWRVNASAIDAGADSALLISDHTLFS-GNPRGSSCIAVEIKAKCGFLPSSEYI 176
V RP WRVNA+ +D DSAL+++DH+LFS G G CI+VEIK KCGFLP+S +I
Sbjct: 121 KVTKQRPLWRVNAANVDTSHDSALILNDHSLFSQGISSGGDCISVEIKPKCGFLPTSRFI 180
Query: 177 SKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNF 236
KEN +K V+R+KMHQ LK EIS+ SEYDPLDLFSGSKE + AIK+ +STPQNNF
Sbjct: 181 GKENMLKTSVSRFKMHQLLKLEYNEISEESEYDPLDLFSGSKESVLEAIKALYSTPQNNF 240
Query: 237 RIFVDGSLVFGGMGGGADSVHPNETEKCLED-----LSKVTGLQLSDFIELLSEAIFKSG 291
R+F++GSL+ GG G P E ED + G + F++L+S+A++ SG
Sbjct: 241 RVFLNGSLILGGSGESTGRTSP-EIGYAFEDALKGFIQSEDGHRTECFLQLVSDAVYGSG 299
Query: 292 VLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEKI 351
VL +LL QKLD DIEGAIH YY++I+QPC +CK + + L +LH+LPLD+S KI
Sbjct: 300 VLDRLLEIQKLDKLDIEGAIHSYYDLINQPCPICK---EGKPLEAELSLHALPLDESLKI 356
Query: 352 VRDFLISATAKDCSLMISFRPRQSGTTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLDKM 411
V+++LI+ATAKDCS+MISF+ R + ++ D V L NQ++DYK +FIDL +KPL +M
Sbjct: 357 VKEYLIAATAKDCSIMISFQSRNAWDSEPSGDYVSLKPTNQTFDYKVHFIDLSLKPLKRM 416
Query: 412 VHYFKLDQKIVNFYTR 427
Y+KLD+KI++FY R
Sbjct: 417 ESYYKLDKKIISFYNR 432
>AT1G22100.1 | chr1:7798023-7800030 REVERSE LENGTH=442
Length = 441
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/433 (48%), Positives = 297/433 (68%), Gaps = 17/433 (3%)
Query: 2 EVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILKD---KGQPAPNCIVF 58
E+VL DA DW Y+GEGA NL+L+YTGSSPS LGK++R++K+ KD G + N +
Sbjct: 3 EIVLEPKDAVDWSYRGEGAVNLVLAYTGSSPSFLGKMMRIQKMPKDGNENGDKSENGL-- 60
Query: 59 SSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGKN 118
++HE+ +WG + L+ + + VM LG HV+ G+ + V+K F E K
Sbjct: 61 TTHEKLIWGDVKDLVSCKNKEIEEYLFVKHVMRPLLGRKHVNPGILLLVAKEFLESVEKI 120
Query: 119 VLDNRPAWRVNASAIDAGADSALLISDHTLFS-GNPRGSSCIAVEIKAKCGFLPSSEYIS 177
+ RP+WR + +++D S LL+ D TLF+ G+ C++VEIK KCGFLPSS +I+
Sbjct: 121 ITSQRPSWRADVASVDTNRSSVLLMDDLTLFAHGHVEDKPCLSVEIKPKCGFLPSSSFIA 180
Query: 178 KENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNFR 237
+EN IKK +TR++MHQ LK EIS+ SEYDPLDLFSGSKERI AIK+ ++TPQNNFR
Sbjct: 181 EENVIKKSITRFEMHQVLKLRENEISEISEYDPLDLFSGSKERILEAIKALYTTPQNNFR 240
Query: 238 IFVDGSLVFGGMGGG---ADSVHPNETEKCLEDLSKV-TGLQLSDFIELLSEAIFKSGVL 293
+F++GSLVFGG+GGG S E L+D+ K GL+ FIEL++E ++ SGVL
Sbjct: 241 VFLNGSLVFGGLGGGICKTTSKVELAFEHILKDIIKTDDGLRADRFIELVAETVYTSGVL 300
Query: 294 GKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEKIVR 353
+LL QKLD ++IEGAIH+YY+ I QPC VC+ L ++S++HS+P+D+ I++
Sbjct: 301 DQLLDVQKLDRYNIEGAIHVYYDFIDQPCKVCRE------LNQFSSMHSIPMDEKVNILK 354
Query: 354 DFLISATAKDCSLMISFRPRQSG-TTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLDKMV 412
+FLISATAKDCS+MISFR ++G + S + ++ L++ Q ++YK +FIDLD++PL KM
Sbjct: 355 EFLISATAKDCSVMISFRSTEAGLSKSSSHSNLHLETTKQEFEYKVHFIDLDMRPLKKME 414
Query: 413 HYFKLDQKIVNFY 425
Y++LD+KI+N Y
Sbjct: 415 VYYELDKKIMNTY 427
>AT1G58643.1 | chr1:21767342-21769456 FORWARD LENGTH=487
Length = 486
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 284/449 (63%), Gaps = 16/449 (3%)
Query: 2 EVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILKDKGQ---PAPNCIVF 58
E+V DA DW Y+ EG NL+L+Y+GSSP+ LGKV+R+KK+ + + + +C+
Sbjct: 38 EIVFETKDAVDWSYRSEGVVNLVLAYSGSSPTFLGKVMRIKKLRNTRNENRDRSGSCL-- 95
Query: 59 SSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGKN 118
++ E+ +WG+I L+ + + + VM LG +V G+ + V K F E K
Sbjct: 96 TTQEKLIWGEIKDLVSCQNKEIVDYLFVKHVMKPLLGHKYVTPGICLPVEKEFLESVKKI 155
Query: 119 VLDNRPAWRVNASAIDAGADSALLISDHTLFSGN--PRGSSCIAVEIKAKCGFLPSSEYI 176
V R +WR N ++D ALL+ D T+FS C+ VEIK KCGFL SS +I
Sbjct: 156 VTSQRHSWRANTLSVDTNRSFALLMDDLTIFSHGQVEDHKPCLTVEIKPKCGFLSSSSFI 215
Query: 177 SKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNF 236
++EN IKK ++R++M+Q LK +IS+ SEYDPLDLFSGSK+RIH AIK+ +STPQN+
Sbjct: 216 AEENVIKKSISRFEMYQVLKLRENQISQISEYDPLDLFSGSKDRIHKAIKALYSTPQNSL 275
Query: 237 RIFVDGSLVFGGMGGG---ADSVHPNETEKCLEDLSKV---TGLQLSDFIELLSEAIFKS 290
++F++GSLVFGG GG S E L+D K GL+ + FIEL++E ++ S
Sbjct: 276 QVFLNGSLVFGGFRGGICKTTSKLELAFEHTLKDFFKTEDDCGLRANAFIELVAETVYAS 335
Query: 291 GVLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEK 350
G L +LL QKLD ++IEGAIH YY+++ QPC C+ + ++L ++ ++HSLP D+
Sbjct: 336 GALDQLLEVQKLDKYNIEGAIHAYYDLVDQPCKACQELESSKLSNQFGSMHSLPQDEKVN 395
Query: 351 IVRDFLISATAKDCSLMISFRPRQSG-TTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLD 409
I++DFLIS+TA DCS+MISFRP ++G + S + ++ L+S Q ++YK +FIDLD++PL
Sbjct: 396 ILKDFLISSTAIDCSVMISFRPIETGLSRSSSHGNIQLESTKQEFEYKIHFIDLDMRPLK 455
Query: 410 KMVHYFKLDQKIVNFYTR--NGEVGGDPR 436
+M Y + D+KI Y + G PR
Sbjct: 456 RMEAYHESDKKITKTYQEMLKKKKGDQPR 484
>AT1G59312.1 | chr1:21839858-21841972 FORWARD LENGTH=487
Length = 486
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 284/449 (63%), Gaps = 16/449 (3%)
Query: 2 EVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILKDKGQ---PAPNCIVF 58
E+V DA DW Y+ EG NL+L+Y+GSSP+ LGKV+R+KK+ + + + +C+
Sbjct: 38 EIVFETKDAVDWSYRSEGVVNLVLAYSGSSPTFLGKVMRIKKLRNTRNENRDRSGSCL-- 95
Query: 59 SSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGKN 118
++ E+ +WG+I L+ + + + VM LG +V G+ + V K F E K
Sbjct: 96 TTQEKLIWGEIKDLVSCQNKEIVDYLFVKHVMKPLLGHKYVTPGICLPVEKEFLESVKKI 155
Query: 119 VLDNRPAWRVNASAIDAGADSALLISDHTLFSGN--PRGSSCIAVEIKAKCGFLPSSEYI 176
V R +WR N ++D ALL+ D T+FS C+ VEIK KCGFL SS +I
Sbjct: 156 VTSQRHSWRANTLSVDTNRSFALLMDDLTIFSHGQVEDHKPCLTVEIKPKCGFLSSSSFI 215
Query: 177 SKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNF 236
++EN IKK ++R++M+Q LK +IS+ SEYDPLDLFSGSK+RIH AIK+ +STPQN+
Sbjct: 216 AEENVIKKSISRFEMYQVLKLRENQISQISEYDPLDLFSGSKDRIHKAIKALYSTPQNSL 275
Query: 237 RIFVDGSLVFGGMGGG---ADSVHPNETEKCLEDLSKV---TGLQLSDFIELLSEAIFKS 290
++F++GSLVFGG GG S E L+D K GL+ + FIEL++E ++ S
Sbjct: 276 QVFLNGSLVFGGFRGGICKTTSKLELAFEHTLKDFFKTEDDCGLRANAFIELVAETVYAS 335
Query: 291 GVLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEK 350
G L +LL QKLD ++IEGAIH YY+++ QPC C+ + ++L ++ ++HSLP D+
Sbjct: 336 GALDQLLEVQKLDKYNIEGAIHAYYDLVDQPCKACQELESSKLSNQFGSMHSLPQDEKVN 395
Query: 351 IVRDFLISATAKDCSLMISFRPRQSG-TTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLD 409
I++DFLIS+TA DCS+MISFRP ++G + S + ++ L+S Q ++YK +FIDLD++PL
Sbjct: 396 ILKDFLISSTAIDCSVMISFRPIETGLSRSSSHGNIQLESTKQEFEYKIHFIDLDMRPLK 455
Query: 410 KMVHYFKLDQKIVNFYTR--NGEVGGDPR 436
+M Y + D+KI Y + G PR
Sbjct: 456 RMEAYHESDKKITKTYQEMLKKKKGDQPR 484
>AT1G58936.1 | chr1:21803600-21805714 FORWARD LENGTH=487
Length = 486
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 284/449 (63%), Gaps = 16/449 (3%)
Query: 2 EVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILKDKGQ---PAPNCIVF 58
E+V DA DW Y+ EG NL+L+Y+GSSP+ LGKV+R+KK+ + + + +C+
Sbjct: 38 EIVFETKDAVDWSYRSEGVVNLVLAYSGSSPTFLGKVMRIKKLRNTRNENRDRSGSCL-- 95
Query: 59 SSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGKN 118
++ E+ +WG+I L+ + + + VM LG +V G+ + V K F E K
Sbjct: 96 TTQEKLIWGEIKDLVSCQNKEIVDYLFVKHVMKPLLGHKYVTPGICLPVEKEFLESVKKI 155
Query: 119 VLDNRPAWRVNASAIDAGADSALLISDHTLFSGN--PRGSSCIAVEIKAKCGFLPSSEYI 176
V R +WR N ++D ALL+ D T+FS C+ VEIK KCGFL SS +I
Sbjct: 156 VTSQRHSWRANTLSVDTNRSFALLMDDLTIFSHGQVEDHKPCLTVEIKPKCGFLSSSSFI 215
Query: 177 SKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNF 236
++EN IKK ++R++M+Q LK +IS+ SEYDPLDLFSGSK+RIH AIK+ +STPQN+
Sbjct: 216 AEENVIKKSISRFEMYQVLKLRENQISQISEYDPLDLFSGSKDRIHKAIKALYSTPQNSL 275
Query: 237 RIFVDGSLVFGGMGGG---ADSVHPNETEKCLEDLSKV---TGLQLSDFIELLSEAIFKS 290
++F++GSLVFGG GG S E L+D K GL+ + FIEL++E ++ S
Sbjct: 276 QVFLNGSLVFGGFRGGICKTTSKLELAFEHTLKDFFKTEDDCGLRANAFIELVAETVYAS 335
Query: 291 GVLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEK 350
G L +LL QKLD ++IEGAIH YY+++ QPC C+ + ++L ++ ++HSLP D+
Sbjct: 336 GALDQLLEVQKLDKYNIEGAIHAYYDLVDQPCKACQELESSKLSNQFGSMHSLPQDEKVN 395
Query: 351 IVRDFLISATAKDCSLMISFRPRQSG-TTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLD 409
I++DFLIS+TA DCS+MISFRP ++G + S + ++ L+S Q ++YK +FIDLD++PL
Sbjct: 396 ILKDFLISSTAIDCSVMISFRPIETGLSRSSSHGNIQLESTKQEFEYKIHFIDLDMRPLK 455
Query: 410 KMVHYFKLDQKIVNFYTR--NGEVGGDPR 436
+M Y + D+KI Y + G PR
Sbjct: 456 RMEAYHESDKKITKTYQEMLKKKKGDQPR 484
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,307,925
Number of extensions: 450249
Number of successful extensions: 1012
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 991
Number of HSP's successfully gapped: 5
Length of query: 445
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 343
Effective length of database: 8,310,137
Effective search space: 2850376991
Effective search space used: 2850376991
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)