BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0657500 Os04g0657500|AK066638
(462 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67050.1 | chr5:26759482-26761165 REVERSE LENGTH=478 292 3e-79
AT5G42930.1 | chr5:17210738-17214152 REVERSE LENGTH=468 291 4e-79
AT1G56630.1 | chr1:21223593-21226943 REVERSE LENGTH=486 280 1e-75
AT3G14360.1 | chr3:4791596-4793534 FORWARD LENGTH=519 260 1e-69
AT1G45201.1 | chr1:17123889-17128462 FORWARD LENGTH=480 251 8e-67
AT5G18640.1 | chr5:6213283-6215494 FORWARD LENGTH=358 63 3e-10
AT5G18630.1 | chr5:6202965-6205448 FORWARD LENGTH=359 59 7e-09
>AT5G67050.1 | chr5:26759482-26761165 REVERSE LENGTH=478
Length = 477
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 238/458 (51%), Gaps = 22/458 (4%)
Query: 12 YMVLRPDRAGAYELLHLLFSPKVGRNKAVDCFTSTELHXXXXXXXXXXXXXXXXXXXXXV 71
Y++LRP+ +EL+ LLFS + + ++VD + TE H
Sbjct: 13 YLILRPEELRPWELVRLLFSGDIEKPRSVDS-SETEEHSFRHRWLIFVSLVLLKLLRF-F 70
Query: 72 GPLVAVLGGALEFALNLASN------VLHGRMEYPDRKSASYRSITGLIDPRVDLERSIT 125
L+A++G ALEF+LN SN L G + P R S +Y+S G +D RV L+ ++
Sbjct: 71 SKLLALVGSALEFSLNFLSNNSFSGLFLRGEVVMPQRTSENYQSFIGHLDTRVSLDMTLN 130
Query: 126 PAD-SRYHAALCVMASKVAYENEAFIRDVVTRRWQMEFVQFFNCWNEFENAYTAQAFVFC 184
D +Y+AAL +MASK+AYEN A I+ VV W M+++ + WNE++ T QAF+
Sbjct: 131 REDGEKYYAALSIMASKIAYENAARIKHVVENHWNMKYLGLVDYWNEYQEKETTQAFIMS 190
Query: 185 DKAADAE------LVVVAFRGTPALDVARWCADVDPSWYKIPRLGRAHAAYTHALGAQRN 238
VVVAFRGT + WC+D D +W+++P +G H + ALG Q N
Sbjct: 191 TDETTTRSNGQETTVVVAFRGTELFNSEDWCSDFDITWFELPNIGNIHGGFMKALGLQNN 250
Query: 239 IGWPKWVEHVKGKPQRVH--AYYAIRDAVKRLLEANGRARVLVAGHGSGGALAVLFATVL 296
WPK P R AYY+IRD++K L+ N + ++ GH GGALA+LF VL
Sbjct: 251 CSWPK---EPLSNPDRKSPLAYYSIRDSLKTLIAQNKNTKFVLTGHSLGGALAILFTAVL 307
Query: 297 AYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPRKRHFRITYGDDPLPRLPHES 356
H E L+R+ GVYT+GQPRVGD+ F E+ L++ +++R Y +D +PRLP++
Sbjct: 308 VIHHETELLERIQGVYTYGQPRVGDSKFGEFMEKKLEKYNIKYYRFVYNNDIVPRLPYDD 367
Query: 357 SAAHFLHFGIRLHFDSLYNLKVVKELPGDGXXXXXXXEFATSRINAAWELARSAYLGYWR 416
F HFG +++D Y KV++E + +A E RS + +
Sbjct: 368 KDLMFKHFGTCIYYDQNYQAKVMREQSDENFFLLRG--IIKMMWSAILEFIRSFTIVAEK 425
Query: 417 SAYCREGWLLMXXXXXXXXLPGLPFHRVQDYVNAVTLA 454
+ EGWLL +PG+ H QDYVNA L
Sbjct: 426 GSEYSEGWLLKGGRALGIIVPGVSNHTPQDYVNATRLT 463
>AT5G42930.1 | chr5:17210738-17214152 REVERSE LENGTH=468
Length = 467
Score = 291 bits (746), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 238/461 (51%), Gaps = 19/461 (4%)
Query: 9 SNDYMVLRPDRAGAYELLHLLFSPKVGRNKAVDCF---TSTELHXXXXXXXXXXXXXXXX 65
+ +Y VL P A +L+HLLFS +G K + +L
Sbjct: 4 TKNYFVLDPREATVSDLIHLLFSSDLGDRKFIHSSEERIEDDLSRFRRRWIIFVSIVIQK 63
Query: 66 XXXXXVGPLVAVLGGALEFALNLAS----------NVLHGRMEYPDRKSASYRSITGLID 115
PL V G +L LNL S N+ G + +P++ SA++ S+ G +D
Sbjct: 64 LIILFKKPLYFV-GFSLACWLNLLSSNGGFLMILPNLFKGNIIWPEKASATFASLNGNLD 122
Query: 116 PRVDLERSITPADSRYHAALCVMASKVAYENEAFIRDVVTRRWQMEFVQFFNCWNEFENA 175
RV+L + RY A L +MASK++YEN F+ V+ W+M+ + F++CWN ++
Sbjct: 123 RRVELNPKVERGSKRYKAMLSIMASKLSYENINFVSSVLHNHWKMDLLGFYSCWNGYQKQ 182
Query: 176 YTAQAFVFCDKAADAELVVVAFRGTPALDVARWCADVDPSWYKIPRLGRAHAAYTHALGA 235
+ + V D + D L++V+FRGT D WC D+D SWY++ +G+ H + ALG
Sbjct: 183 RSTEVIVIKDTSTDPNLIIVSFRGTDPFDADDWCTDLDLSWYEVKNVGKIHGGFMKALGL 242
Query: 236 QRNIGWPKWVEHVKGK-PQRVHAYYAIRDAVKRLLEANGRARVLVAGHGSGGALAVLFAT 294
Q+ GWPK V + + ++AYY +R +K +L+ N ++ ++ GH GGALA+LF
Sbjct: 243 QKE-GWPKEVNLDETQNATTLYAYYTVRRHLKEILDQNPTSKFILTGHSLGGALAILFTA 301
Query: 295 VLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPRKRHFRITYGDDPLPRLPH 354
VL H E+ L+RL GVYTFGQPRVGD F + +L + ++ R Y +D +PRLP
Sbjct: 302 VLVMHDEEQMLERLEGVYTFGQPRVGDEEFGNFMKDSLKKFDVKYERYVYCNDMVPRLPF 361
Query: 355 ESSAAHFLHFGIRLHFDSLYNLKVVKELPGDGXXXXXXXEFATSRINAAWELARSAYLGY 414
+ F HFG L++DS Y KV +E P +NA WEL RS + Y
Sbjct: 362 DDKTLMFKHFGACLYYDSFYKGKVEEEEPNKNYFNLVWV--LPKIMNALWELIRSFVMPY 419
Query: 415 WRSAYCREGWLLMXXXXXXXXLPGLPFHRVQDYVNAVTLAG 455
W+ REGW L +PGLP H +Y+N VTL G
Sbjct: 420 WKGGEFREGWFLRCFRVVALLIPGLPAHFPNEYIN-VTLLG 459
>AT1G56630.1 | chr1:21223593-21226943 REVERSE LENGTH=486
Length = 485
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 239/478 (50%), Gaps = 34/478 (7%)
Query: 11 DYMVLRPDRAGAYELLHLLFSPKVGRNKAVDCFTSTE-----LHXXXXXXXXXXXXXXXX 65
+Y VL P A +L+ LLF + K VD TS E L
Sbjct: 6 NYFVLDPREATVTDLMRLLFYSDLENRKFVD--TSVENLENRLCEFRGRWIIFVSIVVQK 63
Query: 66 XXXXXVGPLVAVLGGALEFALNLAS----------NVLHGRMEYPDRKSASYRSITGLID 115
PL + LG AL F LNL S N++ GR +P++ SA++ SI G +D
Sbjct: 64 LLIILRKPL-SFLGFALGFWLNLPSSNGGFFKIFLNLVKGRFIWPEKTSATFASINGNLD 122
Query: 116 PRVDLE--RSITPADSRYHAALCVMASKVAYENEAFIRDVVTRRWQMEFVQFFNCWNEFE 173
+V+L RSI D RY L +MASK+AYENE FIR V+ WQM+ + F++C N+F+
Sbjct: 123 QKVELGLGRSIKIGDERYKPLLSIMASKLAYENEHFIRSVLQDHWQMDLLGFYSCPNDFD 182
Query: 174 NAYTAQAFVFCDKAADAELVVVAFRGTPALDVARWCADVDPSWYKIPRLGRAHAAYTHAL 233
+ + V D + L+VV+FRGT + WC D+D SW+ + +G+ H + AL
Sbjct: 183 QTRSTEVIVIRDTKDNPNLIVVSFRGTDPFNADDWCTDLDLSWHNVMNVGKIHGGFMKAL 242
Query: 234 GAQRNIGWPKWV--EHVKGKPQRVHAYYAIRDAVKRLLEANGRARVLVAGHGSGGALAVL 291
G + GW + + + + K ++ AYY I +K + E N ++ +++GH GGALA+L
Sbjct: 243 GLPKE-GWYEEINSDQTQNKTSQL-AYYTILRQLKEVFEQNPTSKFILSGHSLGGALAIL 300
Query: 292 FATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPRKRHFRITYGDDPLPR 351
F VL H EK L+RL GVYTFGQPRVGD ++ + L ++ R Y +D +PR
Sbjct: 301 FTAVLIMHDEKEMLERLEGVYTFGQPRVGDEDFGIYMKDKLKEFDVKYKRYVYCNDMVPR 360
Query: 352 LPHESSAAHFLHFGIRLHFDSLYNLKVVKELPGDGXXXXXXXEFATSRINAAWELARSAY 411
LP + F HFG L+ DS Y KV +E P INA WEL RS
Sbjct: 361 LPFDDKTLMFKHFGGCLYCDSFYKGKVEEEEPNKNYFNIFWV--IPKIINAVWELIRSFI 418
Query: 412 LGYWRSAYCREGWLLMXXXXXXXXLPGLPFHRVQDYVNAVTLAG--------SNIPKD 461
+ W+ REGWLL +PGLP H +YVN L N+P D
Sbjct: 419 ISCWQGREYREGWLLTCFRLVALLIPGLPAHFPNEYVNVALLGNFPPQVPDSQNLPDD 476
>AT3G14360.1 | chr3:4791596-4793534 FORWARD LENGTH=519
Length = 518
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 212/421 (50%), Gaps = 44/421 (10%)
Query: 79 GGALEFALNLAS----------NVLHGRMEYPDRKSASYRSITGLIDPRVDLERS----- 123
G ++F LNL S ++ ++ P+R S ++ S G +D R+ L +
Sbjct: 93 GFVVDFFLNLFSANGGFFGLLLRLIQAKVVIPERGSVTFVSTIGQLDGRISLYKEWNFVE 152
Query: 124 ----ITPADS---------RYHAALCVMASKVAYENEAFIRDVVTRRWQMEFVQFFNCWN 170
I DS R LCVMASK+AYEN + +VV W+M V+F +CWN
Sbjct: 153 HLEGIDSVDSGRVKIELGSRGLMDLCVMASKLAYENAKVVENVVDLHWKMNLVEFLDCWN 212
Query: 171 EFENAYTAQAFVFCDKAADAELVVVAFRGTPALDVARWCADVDPSWYKIPRLGRAHAAYT 230
+++ + Q FVF DK DA L+V++FRGT D W D D SWY++P +G+ H +
Sbjct: 213 DYQKQMSTQVFVFTDKQKDANLIVISFRGTEPFDADDWGTDFDYSWYEVPNVGKLHMGFL 272
Query: 231 HALGAQR---------NIGWPKWVEHVKGKPQRVH-----AYYAIRDAVKRLLEANGRAR 276
A+G N+ E K + AYYA+R +KRLL + AR
Sbjct: 273 EAMGLGNRDDTTTFHYNLFEQTSSEEENSKKNLLDMVERSAYYAVRVILKRLLSEHENAR 332
Query: 277 VLVAGHGSGGALAVLFATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPR 336
+V GH GGALA+LF T+L ++E + RL GVYTFGQPR+G+ + +F + L++P
Sbjct: 333 FVVTGHSLGGALAILFPTLLVLNEETEIMKRLLGVYTFGQPRIGNREVGLFMKAQLNQPV 392
Query: 337 KRHFRITYGDDPLPRLPHESSAAHFLHFGIRLHFDSLYNLKVVKELPGDGXXXXXXXEFA 396
R+FR+ Y +D +PRLP++ + HFG+ L +DS YN ++ P
Sbjct: 393 DRYFRVVYCNDIVPRLPYDDKTFLYKHFGLCLFYDSFYNETKAEDEPDPNPYGLRYK--I 450
Query: 397 TSRINAAWELARSAYLGYWRSAYCREGWLLMXXXXXXXXLPGLPFHRVQDYVNAVTLAGS 456
+ A WEL R +GY +EGW + +PGL H + DYVN+V L
Sbjct: 451 LGHVIAVWELVRGLTMGYTHGPDYKEGWFRILFRLMGLVIPGLSDHCMTDYVNSVRLGPD 510
Query: 457 N 457
N
Sbjct: 511 N 511
>AT1G45201.1 | chr1:17123889-17128462 FORWARD LENGTH=480
Length = 479
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 200/371 (53%), Gaps = 8/371 (2%)
Query: 86 LNLASNVLHGRMEYPDRKSASYRSITGLIDPRVDLERSITPADSRYHAALCVMASKVAYE 145
NL N++ G++ PD+ SA+Y S G D R++L+ I Y + L +MASK++YE
Sbjct: 98 FNLILNLMSGKLVKPDKSSATYTSFIGCSDRRIELDEKINVGSIEYKSMLSIMASKISYE 157
Query: 146 NEAFIRDVVTRRWQMEFVQFFNCWNEFENAYTAQAFVFCDKAADAELVVVAFRGTPALDV 205
++ +I VV W+M+ V ++ +N F+ + QAFVF + + +L+VV+FRGT +
Sbjct: 158 SKPYITSVVKNTWKMDLVGNYDFYNAFQESKLTQAFVFKTSSTNPDLIVVSFRGTEPFEA 217
Query: 206 ARWCADVDPSWYKIPRLGRAHAAYTHALGAQRNIGWPKWVEHVKGKPQRVHAYYAIRDAV 265
A WC D+D SWY++ +G+ HA ++ ALG Q++ GWPK E++ Q +AYY IR +
Sbjct: 218 ADWCTDLDLSWYEMKNVGKVHAGFSRALGLQKD-GWPK--ENISLLHQ--YAYYTIRQML 272
Query: 266 KRLLEANGRARVLVAGHGSGGALAVLFATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLA 325
+ L N + ++ GH GGALA LF +LA H E LD+L G+YTFGQPRVGD
Sbjct: 273 RDKLGRNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDEDFG 332
Query: 326 MFAERNLDRPRKRHFRITYGDDPLPRLPHESSAA-HFLHFGIRLHFDSLYNLKVVKELPG 384
F + + + + R Y +D +PR+P + + H+G F+SLY KV ++ P
Sbjct: 333 EFMKGVVKKHGIEYERFVYNNDVVPRVPFDDKYLFSYKHYGPCNSFNSLYKGKVREDAPN 392
Query: 385 DGXXXXXXXEFATSRINAAWELARSAYLGYWRSAYCREGWLLMXXXXXXXXLPGLPFHRV 444
+ WE RS L +W+ +E WL+ PG H
Sbjct: 393 ANYFNLLW--LIPQLLTGLWEFIRSFILQFWKGDEYKENWLMRFVRVVGIVFPGGSNHFP 450
Query: 445 QDYVNAVTLAG 455
DYVN+ L G
Sbjct: 451 FDYVNSTRLGG 461
>AT5G18640.1 | chr5:6213283-6215494 FORWARD LENGTH=358
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 39/210 (18%)
Query: 179 QAFVFCDKAADAELVVVAFRGTPALDVARWCAD-----VDPSWYKIPRLGRAHAAYTHAL 233
QA+V A D +++AFRGT + W +D +D ++ +P H Y+
Sbjct: 88 QAYV--GVAKDLNAIIIAFRGTQEHSIQNWVSDLFWKQLDLNYPDMPDAMVHHGFYS--- 142
Query: 234 GAQRNIGWPKWVEHVKGKPQRVHAYYAIRDAVKRLLEANG-RARVLVAGHGSGGALAVLF 292
A N +P A+ DAVKR E+ G ++V GH GGA+A
Sbjct: 143 -AYHN---------TTVRP-------AVLDAVKRAKESYGANLNIMVTGHSMGGAMASFC 185
Query: 293 ATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPRKRHFRITYGDDPLPRL 352
A L ++ + + V TFGQPRVG+A A + NL P FRI + D +P L
Sbjct: 186 ALDLVVNEGEENVQ----VMTFGQPRVGNAAFASYF--NLLVPNT--FRIIHDRDIVPHL 237
Query: 353 P---HESSAAHFLHFGIRLHFDSLYNLKVV 379
P H + HF + L L +V
Sbjct: 238 PPYYHLFPQKTYHHFPTEVWLTELSILNIV 267
>AT5G18630.1 | chr5:6202965-6205448 FORWARD LENGTH=359
Length = 358
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 26/183 (14%)
Query: 172 FENAYTAQAFVFCDKAADAELVVVAFRGTPALDVARWCADVDPSWYKIPRLGRAHAAYTH 231
F+ + QA+V A D +++AFRGT + W +D+ W ++ Y
Sbjct: 82 FDVEHCLQAYV--GVAKDLNAIIIAFRGTQEHSIQNWVSDL--FWKQLD------LNYPD 131
Query: 232 ALGAQRNIGWPKWVEHVKGKPQRVHAYYAIRDAVKRLLEANG-RARVLVAGHGSGGALAV 290
A + G+ + +P A+ DA+ R+ + G ++V GH GGA+A
Sbjct: 132 MPDAMVHHGFYSAYHNTTLRP-------AVLDAITRVKKVYGANINIIVTGHSMGGAMAS 184
Query: 291 LFATVLAYHKEKAALDRLAGVYTFGQPRVGDAMLAMFAERNLDRPRKRHFRITYGDDPLP 350
L ++ + + V TFGQPRVG+A A + +L P FRIT+ D +P
Sbjct: 185 FCGLDLVVNEGEENVQ----VMTFGQPRVGNAAFASY--YSLLVPNT--FRITHDRDMVP 236
Query: 351 RLP 353
LP
Sbjct: 237 HLP 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,085,259
Number of extensions: 344563
Number of successful extensions: 870
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 855
Number of HSP's successfully gapped: 8
Length of query: 462
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 360
Effective length of database: 8,310,137
Effective search space: 2991649320
Effective search space used: 2991649320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)