BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0653200 Os04g0653200|AB112773
(417 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442 562 e-160
AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442 555 e-158
AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468 512 e-145
AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455 340 1e-93
AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460 338 2e-93
AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476 330 7e-91
>AT3G13320.1 | chr3:4315418-4317997 FORWARD LENGTH=442
Length = 441
Score = 562 bits (1448), Expect = e-160, Method: Compositional matrix adjust.
Identities = 277/398 (69%), Positives = 322/398 (80%), Gaps = 1/398 (0%)
Query: 18 LQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVF 77
++ G L +S Q + S L SI+IVIF +KLNLLLPFGP +I++HY G VF
Sbjct: 43 MEQGSLSTSFPQH-TPKAPKNSVLNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVF 101
Query: 78 LFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQ 137
L +++GITPLAERLGYATEQLA YTGPTVGGLLNATFGN TE+II+I+ALKNGMIRVVQ
Sbjct: 102 LLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQL 161
Query: 138 SLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFT 197
+LLGSILSNMLLV+GCAFF GG+V KDQVF K A VNSGLLLMAVMG++FPAVLH+T
Sbjct: 162 TLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHYT 221
Query: 198 HSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXX 257
HSEV G+SE++LSRFSSCIML+AYA+YL+FQL ++N+YSP+
Sbjct: 222 HSEVHAGSSELALSRFSSCIMLIAYAAYLFFQLKSQSNSYSPLDEESNQNEETSAEDEDP 281
Query: 258 XIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASA 317
I WE+I WL++LT WVS+LS YLV+AIEGAS S N+P+AFIS ILLPIVGNAAEHA A
Sbjct: 282 EISKWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGA 341
Query: 318 IMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLV 377
IMFAMKDKLD++LGVAIGSS QISMF +PFCVVIGWMMGQ+MDLNFQLFETA LFITV+V
Sbjct: 342 IMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIV 401
Query: 378 VAFMLQDGVANYLKGLMLILCYLIVAASFFVHVDPQSS 415
VAF LQ+G +NY KGLMLILCYLIVAASFFVH DP
Sbjct: 402 VAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDPHQD 439
>AT1G55730.1 | chr1:20831387-20833941 REVERSE LENGTH=442
Length = 441
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/378 (71%), Positives = 315/378 (83%)
Query: 39 SALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQL 98
S L+S +IVI ++KLNLLLPFGP +I+LHY T G +FL S++GITPLAERLGYATEQL
Sbjct: 63 SVLQSFKIVILSNKLNLLLPFGPLAILLHYLTDNKGWIFLLSLVGITPLAERLGYATEQL 122
Query: 99 AIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAG 158
A YTG TVGGLLNATFGN TE+II+I+ALK+GMIRVVQ +LLGSILSNMLLV+GCAFF G
Sbjct: 123 ACYTGSTVGGLLNATFGNVTELIISIFALKSGMIRVVQLTLLGSILSNMLLVLGCAFFCG 182
Query: 159 GIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIM 218
G+V K+QVF K AVVNSGLLLMAVMGL+FPAVLH+THSEV G+SE++LSRFSSCIM
Sbjct: 183 GLVFSQKEQVFDKGNAVVNSGLLLMAVMGLLFPAVLHYTHSEVHAGSSELALSRFSSCIM 242
Query: 219 LVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXXXIGMWESIAWLAMLTLWVSIL 278
LVAYA+YL+FQL + ++Y+P+ I WE+I WL++LT WVS+L
Sbjct: 243 LVAYAAYLFFQLKSQPSSYTPLTEETNQNEETSDDDEDPEISKWEAIIWLSILTAWVSLL 302
Query: 279 SEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSST 338
S YLV+AIEGAS S +P++FISVILLPIVGNAAEHA AIMFAMKDKLD++LGVAIGSS
Sbjct: 303 SGYLVDAIEGASVSWKIPISFISVILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSI 362
Query: 339 QISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLILC 398
QISMF +PFCVVIGWMMG +MDLNFQLFETATLFITV+VVAF LQ+G +NY KGLMLILC
Sbjct: 363 QISMFAVPFCVVIGWMMGAQMDLNFQLFETATLFITVIVVAFFLQEGTSNYFKGLMLILC 422
Query: 399 YLIVAASFFVHVDPQSSD 416
YLIVAASFFVH DP D
Sbjct: 423 YLIVAASFFVHEDPHQDD 440
>AT1G55720.1 | chr1:20828118-20830595 REVERSE LENGTH=468
Length = 467
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/413 (63%), Positives = 312/413 (75%), Gaps = 15/413 (3%)
Query: 12 KANGPQ------LQNGGLRSSMVQSWNLQRFVESALRSIRIVIFTSKLNLLLPFGPASII 65
+ + PQ ++ G LR ++ S ++S +IVI ++KLNLLLPFGP +I+
Sbjct: 46 ETDSPQTNAASLMEQGSLRERRAKAPR-----NSVVQSFKIVILSNKLNLLLPFGPLAIL 100
Query: 66 LHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIY 125
+HY T G FL S++GITPLAERLGYATEQL+ YTG TVGGLLNATFGN E+II+I
Sbjct: 101 VHYLTDNKGWFFLLSLVGITPLAERLGYATEQLSCYTGATVGGLLNATFGNVIELIISII 160
Query: 126 ALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAV 185
ALKNGMIRVVQ +LLGSILSN+LLV+GCAFF GG+V KDQVF K AVV+SG+LLMAV
Sbjct: 161 ALKNGMIRVVQLTLLGSILSNILLVLGCAFFCGGLVFPGKDQVFDKRNAVVSSGMLLMAV 220
Query: 186 MGLMFPAVLHFTHSEVRQGASEVSLSRFSSCIMLVAYASYLYFQLSGRNNAYSPIGXXXX 245
MGL+FP LH+THSEV G+SE++LSRF SCIMLVAYA+YL+FQL + + Y+
Sbjct: 221 MGLLFPTFLHYTHSEVHAGSSELALSRFISCIMLVAYAAYLFFQLKSQPSFYTE---KTN 277
Query: 246 XXXXXXXXXXXXXIGMWESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILL 305
I WE+I WL++ T WVS+LS YLV+AIEG S S +P++FISVILL
Sbjct: 278 QNEETSNDDEDPEISKWEAIIWLSIFTAWVSLLSGYLVDAIEGTSVSWKIPISFISVILL 337
Query: 306 PIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQL 365
PIVGNAAEHA AIMFAMKDKLD++LGVAIGSS QISMF +PFCVVIGWMMG +MDLN QL
Sbjct: 338 PIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGAQMDLNLQL 397
Query: 366 FETATLFITVLVVAFMLQ-DGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
FETATL ITV+VVAF LQ +G +NY K LMLILCYLIVAASFFVH DP D
Sbjct: 398 FETATLLITVIVVAFFLQLEGTSNYFKRLMLILCYLIVAASFFVHEDPHQGTD 450
>AT5G01490.1 | chr5:195589-198465 FORWARD LENGTH=455
Length = 454
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 256/396 (64%), Gaps = 21/396 (5%)
Query: 35 RFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYA 94
F+ L +++ V+ +KL +L P P +++ H VF S+LG+TPLAER+ +
Sbjct: 58 EFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFL 117
Query: 95 TEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCA 154
TEQ+A +TGPTVGGL+NAT GNATEMIIAI A+ +R+V+ SLLGSILSN+L V+G +
Sbjct: 118 TEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTS 177
Query: 155 FFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFT-HSEVRQGASEVSLSRF 213
F GGI + K Q F +NS LL +A++ P ++ FT +E G+ V LSR
Sbjct: 178 LFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRA 237
Query: 214 SSCIMLVAYASYLYFQL------------SGRNNAYSPIGXXXXXXXXXXXXXXXXXIGM 261
SS +ML+AY ++L F L R + + IGM
Sbjct: 238 SSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDD--------DVSDKEEEGAVIGM 289
Query: 262 WESIAWLAMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFA 321
W +I WL ++TL V++LS+YLV+ I+ A+DS L V FI +ILLPIVGNAAEHA A++FA
Sbjct: 290 WSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFA 349
Query: 322 MKDKLDITLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFM 381
++KLDITLG+A+GS+TQI++FV+P V++ W MG +MDLNF L ETA +++LV + +
Sbjct: 350 FRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLV 409
Query: 382 LQDGVANYLKGLMLILCYLIVAASFFVHVDPQSSDD 417
LQDG +NY+KGL+L+LCY+++AA FFV P + +
Sbjct: 410 LQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSTETN 445
>AT3G51860.1 | chr3:19239458-19242519 FORWARD LENGTH=460
Length = 459
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/388 (47%), Positives = 259/388 (66%), Gaps = 8/388 (2%)
Query: 35 RFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYA 94
+ +++ L +++ VI +KL LL P +I+ + L+F S++G+TPLAER+ +
Sbjct: 57 KTLKNILSNLQEVILGTKLTLLFLAIPLAILANSYNYGRPLIFGLSLIGLTPLAERVSFL 116
Query: 95 TEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCA 154
TEQLA YTGPTVGGLLNAT GNATE+IIAI AL N + VV+ SLLGSILSN+LLV+G +
Sbjct: 117 TEQLAFYTGPTVGGLLNATCGNATELIIAILALANNKVAVVKYSLLGSILSNLLLVLGTS 176
Query: 155 FFAGGIVHRNKDQVFSKATAVVN------SGLLLMAVMGLMFPAVLHFTHSEVRQGASEV 208
F GGI + ++Q F + A VN L + + L + A + S + + + +
Sbjct: 177 LFFGGIANIRREQRFDRKQADVNFFLLLMGLLCHLLPLLLKYAATGEVSTSMINKMS--L 234
Query: 209 SLSRFSSCIMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXXXIGMWESIAWL 268
+LSR SS +ML+AY +YL FQL + IG W AWL
Sbjct: 235 TLSRTSSIVMLIAYIAYLIFQLWTHRQLFEAQQDDDDAYDDEVSVEETPVIGFWSGFAWL 294
Query: 269 AMLTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDI 328
+T+ +++LSEY+V+ IE ASDS L V+FIS+ILLPIVGNAAEHA AI+FA K+KLDI
Sbjct: 295 VGMTIVIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDI 354
Query: 329 TLGVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVAN 388
+LGVA+GS+TQIS+FV+P V++ W++G KMDLNF + ET++L + +++ AF LQDG ++
Sbjct: 355 SLGVALGSATQISLFVVPLSVIVAWILGIKMDLNFNILETSSLALAIIITAFTLQDGTSH 414
Query: 389 YLKGLMLILCYLIVAASFFVHVDPQSSD 416
Y+KGL+L+LCY+I+AA FFV PQ +D
Sbjct: 415 YMKGLVLLLCYVIIAACFFVDQIPQPND 442
>AT2G38170.3 | chr2:15990113-15993178 REVERSE LENGTH=476
Length = 475
Score = 330 bits (847), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/379 (47%), Positives = 248/379 (65%), Gaps = 6/379 (1%)
Query: 41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAI 100
L +++ VI +KL +L P PA+II Y +F S+LG+TPLAER+ + TEQLA
Sbjct: 63 LSNLQEVILGTKLAILFPAIPAAIICTYCGVSQPWIFGLSLLGLTPLAERVSFLTEQLAF 122
Query: 101 YTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGI 160
YTGPT+GGLLNAT GNATE+IIAI AL N + VV+ SLLGSILSN+LLV+G + F GGI
Sbjct: 123 YTGPTLGGLLNATCGNATELIIAILALTNNKVAVVKYSLLGSILSNLLLVLGTSLFCGGI 182
Query: 161 VHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGAS----EVSLSRFSSC 216
+ ++Q F + A VN LLL+ + + P ++ + + A ++S+SR S
Sbjct: 183 ANIRREQRFDRKQADVNFFLLLLGFLCHLLPLLVGYLKNGEASAAVLSDMQLSISRGFSI 242
Query: 217 IMLVAYASYLYFQLSGRNNAYSPIGXXXXXXXXXXXXXXXXXIGMWESIAWLAMLTLWVS 276
+ML++Y +YL FQL + I W AWL +TL ++
Sbjct: 243 VMLISYIAYLVFQLWTHRQLFD--AQEQEDEYDDDVEQETAVISFWSGFAWLVGMTLVIA 300
Query: 277 ILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGS 336
+LSEY+V IE ASD NL V+FIS+ILLPIVGNAAEHA A++FA K+KLDI+LGVA+GS
Sbjct: 301 LLSEYVVATIEEASDKWNLSVSFISIILLPIVGNAAEHAGAVIFAFKNKLDISLGVALGS 360
Query: 337 STQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYLKGLMLI 396
+TQI +FV+P +++ W++G MDLNF ET L +++++ AF LQDG ++Y+KGL+L+
Sbjct: 361 ATQIGLFVVPLTIIVAWILGINMDLNFGPLETGCLAVSIIITAFTLQDGSSHYMKGLVLL 420
Query: 397 LCYLIVAASFFVHVDPQSS 415
LCY I+A FFV PQS
Sbjct: 421 LCYFIIAICFFVDKLPQSE 439
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,458,479
Number of extensions: 257685
Number of successful extensions: 778
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 767
Number of HSP's successfully gapped: 6
Length of query: 417
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 316
Effective length of database: 8,337,553
Effective search space: 2634666748
Effective search space used: 2634666748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)