BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0644000 Os04g0644000|AK100283
(546 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542 474 e-134
AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546 428 e-120
AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558 332 3e-91
AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539 331 8e-91
AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510 64 2e-10
>AT2G12400.1 | chr2:5005144-5008140 REVERSE LENGTH=542
Length = 541
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/478 (49%), Positives = 310/478 (64%), Gaps = 8/478 (1%)
Query: 56 WRRLIVETPSPGAGADAAHPGTKSLPLAAARTHRRDPLANLTMYSGGWNISDQHYWASVA 115
WR ++E + + SL LAA RT R+DP N +Y+GGWNIS+ HY SV
Sbjct: 46 WRTSVIERVIAEESGENS-----SLILAAKRTRRKDPADNFKLYTGGWNISNSHYLTSVG 100
Query: 116 YTAVPLILVGMLWFIVFGIVLLIISCCCCFCRKKYNTYSPATYXXXXXXXXXXXXXXXXG 175
YTA P I++ ++WF+ FG+ L +I C C C ++ YS Y G
Sbjct: 101 YTAAPFIIIALVWFVFFGLSLSLICLCYCCCARQSYGYSRVAYALSLILLISFTIAAIIG 160
Query: 176 CIILHCGQELFHSSTIKTVDYIVGQGNLTVDSLRNFSGSLAAAKNIGVDQVFLPVQVQQK 235
C+ L+ GQ FH+ST T+DY+V Q NLT ++LRN S L AAK + V LP V
Sbjct: 161 CVFLYTGQGKFHASTTDTLDYVVSQANLTSENLRNVSDYLNAAKKVDVQSSILPQDVLSS 220
Query: 236 IDVIEDKLNSSANEFSTRALENSKKIKHVMDKMQYNLMVIAAVMLGLAIFGFLFSILGLR 295
ID I+ K+NSSA S + +EN KI++V+D M+ L++IAAVML LA GFL SI GL+
Sbjct: 221 IDNIQGKINSSATTLSVKTMENQDKIQNVLDIMRLALVIIAAVMLFLAFIGFLLSIFGLQ 280
Query: 296 FLVSLLVIAGWFVLVITIMMSAAFLLLHNVVADTCVAMDDWVTHPQAHTALDDILPCVDV 355
LV LVI GW ++ +T ++ FLLLHNVV DTCVAMD WV +P AHTALDDILPCVD
Sbjct: 281 CLVYTLVILGWILVTVTFVLCGGFLLLHNVVGDTCVAMDQWVQNPTAHTALDDILPCVDN 340
Query: 356 ATANESMYRSEEVTVQLVALXXXXXXXXSNRDFPPSFRPLYINQSGPLMPKLCDPFNPDM 415
ATA E++ R++ VT QLV L +NR+FPP FRPLY NQSGPLMP LC+PFN D+
Sbjct: 341 ATARETLTRTKLVTYQLVNLLDNAISNMTNRNFPPQFRPLYYNQSGPLMPLLCNPFNADL 400
Query: 416 SPRKCAPGEVNFDTAAAEWKKFECQTTGPPGSEVCATEGRVTPAAYGQMTAAASISQGLY 475
S R+C PG+V+ + A WK F CQ P C+T GR+TP Y QM AA ++S GLY
Sbjct: 401 SDRQCQPGQVHLNNATEVWKNFTCQIVTP---GTCSTPGRLTPKLYSQMAAAVNVSYGLY 457
Query: 476 QYGPFLMELQDCSFVRETFTAISDNNCPGLELYSRHVYLGLLLISGAVMMSIVFWMVH 533
+YGPFL +LQ C FVR TFT I ++CPGL+ Y++ +Y+GL+++S +VM S+VFW+++
Sbjct: 458 KYGPFLADLQGCDFVRSTFTDIERDHCPGLKRYTQWIYVGLVVVSASVMSSLVFWVIY 515
>AT2G25270.1 | chr2:10759779-10762358 FORWARD LENGTH=546
Length = 545
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/457 (44%), Positives = 296/457 (64%), Gaps = 5/457 (1%)
Query: 79 SLPLAAARTHRRDPLANLTMYSGGWNISDQHYWASVAYTAVPLILVGMLWFIVFGIVLLI 138
S+ LAA RT+R+DPL Y+GGWNIS+QHYWASV+YTAVPL ++ +WF+ FGI LL+
Sbjct: 69 SVALAAQRTYRKDPLNGFEKYTGGWNISNQHYWASVSYTAVPLFVLAAVWFLGFGICLLV 128
Query: 139 ISCCCCFCRKKYNT-YSPATYXXXXXXXXXXXXXXXXGCIILHCGQELFHSSTIKTVDYI 197
I C C C + + YS Y GC++L+ GQ ++ ST +T++Y+
Sbjct: 129 I-CMCHICHRTNSVGYSKVAYVVSLIFLLIFTVIAIIGCVLLYSGQIRYNKSTTETLEYV 187
Query: 198 VGQGNLTVDSLRNFSGSLAAAKNIGVDQVFLPVQVQQKIDVIEDKLNSSANEFSTRALEN 257
+ Q + T+ LR S LA+AK V QV LP VQ +ID I KL+SS + ++ +
Sbjct: 188 MSQADSTISQLRAISDYLASAKQAAVLQVLLPANVQTEIDQIGVKLDSSVATITEKSTNS 247
Query: 258 SKKIKHVMDKMQYNLMVIAAVMLGLAIFGFLFSILGLRFLVSLLVIAGWFVLVITIMMSA 317
S I+H +D ++ L+V++ VML + G + SI G++ +V LVI GW ++ T ++S
Sbjct: 248 SNHIRHFLDSVRVALIVVSIVMLVVTFLGLVSSIFGMQVIVYTLVILGWILVTGTFILSG 307
Query: 318 AFLLLHNVVADTCVAMDDWVTHPQAHTALDDILPCVDVATANESMYRSEEVTVQLVALXX 377
FL+LHN ADTCVAM +WV P ++TALD+ILPC D ATA E++ RS EVT QLV L
Sbjct: 308 TFLVLHNATADTCVAMSEWVERPSSNTALDEILPCTDNATAQETLMRSREVTGQLVELIN 367
Query: 378 XXXXXXSNRDFPPSFRPLYINQSGPLMPKLCDPFNPDMSPRKCAPGEVNFDTAAAEWKKF 437
SN +F P F P+Y NQSGPL+P LC+PFN D++ R C+PG+++ + A W F
Sbjct: 368 TVITNVSNINFSPVFVPMYYNQSGPLLPLLCNPFNHDLTDRSCSPGDLDLNNATEAWTSF 427
Query: 438 ECQTTGPPGSEVCATEGRVTPAAYGQMTAAASISQGLYQYGPFLMELQDCSFVRETFTAI 497
CQ + + C T GR+TPA Y QM + +IS GL + PFL++LQDCS+ ++TF I
Sbjct: 428 VCQVS---QNGTCTTTGRLTPALYSQMASGVNISTGLIRDAPFLVQLQDCSYAKQTFRDI 484
Query: 498 SDNNCPGLELYSRHVYLGLLLISGAVMMSIVFWMVHT 534
++++CPGL+ Y VY+GL +++ AVM+S++FW++++
Sbjct: 485 TNDHCPGLQRYGYWVYVGLAILATAVMLSLMFWIIYS 521
>AT1G71110.1 | chr1:26818244-26820852 FORWARD LENGTH=558
Length = 557
Score = 332 bits (851), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 275/485 (56%), Gaps = 13/485 (2%)
Query: 58 RLIVETPSPGA--GADAAHPGTKS-------LPLAAARTHRRDPLANLTMYSGGWNISDQ 108
RLI+ +P+ G G + PG +S L LAA RT R D L Y GGWNI++
Sbjct: 35 RLILGSPNFGTWKGGISLAPGPESDDVVSDYLLLAAHRTKRPDILRAFKPYHGGWNITNN 94
Query: 109 HYWASVAYTAVPLILVGMLWFIVFGIVLLIISCCCCFCRKKYNTYSPATYXXXXXXXXXX 168
HYWASV +T P ++ ++W + FG +L++ C K S T
Sbjct: 95 HYWASVGFTGAPGFILAVIWLLSFGSLLVVYHCFKWRICDKAKGSSFDTRRICFILLIVF 154
Query: 169 XXXXXXGCIILHCGQELFHSSTIKTVDYIVGQGNLTVDSLRNFSGSLAAAKNIGVDQVFL 228
GCI+L GQ+ FH+ + T+ Y+V Q + TV+ L+N + L+ AK I V Q+ +
Sbjct: 155 TCVAAVGCILLSVGQDKFHTEAMHTLKYVVNQSDYTVEILQNVTQYLSLAKTINVTQIVI 214
Query: 229 PVQVQQKIDVIEDKLNSSANEFSTRALENSKKIKHVMDKMQYNLMVIAAVMLGLAIFGFL 288
P V +ID + LN++A +N+ KIK V ++ L+ +A VML L+ G L
Sbjct: 215 PSDVMGEIDKLNVNLNTAAVTLGETTTDNAAKIKRVFYAVRSALITVATVMLILSFVGLL 274
Query: 289 FSILGLRFLVSLLVIAGWFVLVITIMMSAAFLLLHNVVADTCVAMDDWVTHPQAHTALDD 348
S+L + +V + V++GW ++ +T ++ FL+L+N ++DTCVAM +WV +P A TAL
Sbjct: 275 LSVLRHQHVVHIFVVSGWILVAVTFVLCGVFLILNNAISDTCVAMKEWVDNPHAETALSS 334
Query: 349 ILPCVDVATANESMYRSEEVTVQLVALXXXXXXXXSNRDFPPSFRPLYINQSGPLMPKLC 408
ILPCVD T N+++ +S+ V +V + +N + P + Y NQSGP MP LC
Sbjct: 335 ILPCVDQQTTNQTLSQSKVVINSIVTVVNTFVYAVANTNPAPG-QDRYYNQSGPPMPPLC 393
Query: 409 DPFNPDMSPRKCAPGEVNFDTAAAEWKKFECQTTGPPGSEVCATEGRVTPAAYGQMTAAA 468
PF+ +M R+C+P E++ + A++ W+ ++C+ T P G +C T GRVTP +GQ+ AA
Sbjct: 394 IPFDANMEDRQCSPWELSIENASSVWENYKCEVT-PSG--ICTTVGRVTPDTFGQLVAAV 450
Query: 469 SISQGLYQYGPFLMELQDCSFVRETFTAISDNNCPGLELYSRHVYLGLLLISGAVMMSIV 528
+ S L Y P L+ +DC+FVRETF +I+ + CP L R V GL LIS V++ +V
Sbjct: 451 NESYALEHYTPPLLSFRDCNFVRETFMSITSDYCPPLVRNLRIVNAGLGLISVGVLLCLV 510
Query: 529 FWMVH 533
W+ +
Sbjct: 511 LWIFY 515
>AT1G80540.1 | chr1:30281638-30284258 REVERSE LENGTH=539
Length = 538
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 185/463 (39%), Positives = 266/463 (57%), Gaps = 12/463 (2%)
Query: 76 GTKSLPLAAARTHRRDPLANLTMYSGGWNISDQHYWASVAYTAVPLILVGMLWFIVFGIV 135
GT+ L LAA RT R DPL + +Y GWN+++ HY ASV ++AVP I++ + WF++ G+
Sbjct: 61 GTR-LVLAAERTQRPDPLNHFNIYVDGWNVTNSHYIASVGFSAVPFIVIAIAWFVLLGLF 119
Query: 136 LLIISCCCCFC---RKKYNTYSPATYXXXXXXXXXXXXXXXXGCIILHCGQELFHSSTIK 192
L+ CCC C R+ Y YS Y G +L+ GQ F+ S +
Sbjct: 120 LICSCLCCCCCGCGRRNYG-YSRVCYTLSLVFLLLFTIAAVIGSAMLYTGQNEFYGSVER 178
Query: 193 TVDYIVGQGNLTVDSLRNFSGSLAAAKNIGVD-QVFLPVQVQQKIDVIEDKLNSSANEFS 251
T YIV Q + L + S+ +AK+I +D P + + ID + + S +
Sbjct: 179 TFMYIVKQATGVLTKLTSLWDSIQSAKDIQLDGHNLFPPEFRGNIDHFNNMIKMSNITYP 238
Query: 252 TR-ALENSKKIKHVMDKMQYNLMVIAAVMLGLAIFGFLFSILGLRFLVSLLVIAGWFVLV 310
R A + + + ++ ++Y L VIA VML +A G LFS GLR LV LLVI GW ++
Sbjct: 239 DRVANQTIRYLTGALNPVRYVLNVIAGVMLAVAFLGLLFSFCGLRVLVYLLVILGWILVT 298
Query: 311 ITIMMSAAFLLLHNVVADTCVAMDDWVTHPQAHTALDDILPCVDVATANESMYRSEEVTV 370
TI++SA FL+ HNVVADTC+AMD WV P A +AL +LPC+D T E++ ++ +T
Sbjct: 299 ATILLSAVFLVFHNVVADTCMAMDQWVHDPAADSALSQLLPCLDPKTIGETLDITKTMTA 358
Query: 371 QLVALXXXXXXXXSNRD-FPPSFRPLYINQSGPLMPKLCDPFNPDMSPRKCAPGEVNFDT 429
V + SN D FPP+ P Y NQSGPL+P LC+P + + PR CAP EV
Sbjct: 359 TAVDMTNAYTVNVSNHDQFPPN-APFYHNQSGPLVPLLCNPLDQNHKPRPCAPDEVLLAN 417
Query: 430 AAAEWKKFECQTTGPPGSEVCATEGRVTPAAYGQMTAAASISQGLYQYGPFLMELQDCSF 489
A+ +K + CQ +C T+GR+T +Y QM A +++ L YGPFL + DC+F
Sbjct: 418 ASQVYKGYICQVN---AEGICTTQGRLTQGSYDQMMGAINVAFTLDHYGPFLASIADCTF 474
Query: 490 VRETFTAISDNNCPGLELYSRHVYLGLLLISGAVMMSIVFWMV 532
VR+TF I+ NCPGL + S+ +Y GL +SGAVM S++FW++
Sbjct: 475 VRDTFRDITTKNCPGLSITSQWIYAGLASLSGAVMFSLIFWLI 517
>AT5G67550.1 | chr5:26946908-26949112 REVERSE LENGTH=510
Length = 509
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 300 LLVIAGWFVLVITIMMSAAFLLLHNVVADTCVAMDDWVTHPQAHTALDDILPCVDVATAN 359
+++ W + + +++ +H D C A + +V +P+ T L ++ PC+D ++
Sbjct: 249 MVIFLCWIITTLCWVLTGFDFFIHTFAEDLCSAFNGFVQNPRNST-LTNLFPCMDPLHSD 307
Query: 360 ESMYRSEEVTVQLVALXXXXXXXXSNRDFPPSFRPLYINQS------GPLMPKLCDPFNP 413
+++ ++L N S R + P +CDPF
Sbjct: 308 KTLIE--------ISLMIHNFITQLNSKVAESMRSNALTDRSNTVSWAPESGIICDPFVG 359
Query: 414 DM----SPRKCAPGEVNFDTAAAEWKKFECQTTGPPGSEVCATEGRVTP-AAYGQMTAAA 468
+P+ C+ G + +F C PP E C G+ P AAY ++ A +
Sbjct: 360 QQINSYTPQSCSNGAIPIGEFPNILSRFTCHDKDPP--ETCRITGKFIPEAAYLKVYAYS 417
Query: 469 SISQGLYQYGPFLMELQDCSFVRETFTAISDNNCPGLELYSRHVYLGLLLISGAVMMSIV 528
+ +QG+ P L +C V++T ++I N C ++ +L +S +++ ++
Sbjct: 418 NSAQGMLDILPSFQNLTECLAVKDTLSSIVSNQCDPFRASMYRLWASILALSLIMVVLVL 477
Query: 529 FWM 531
++
Sbjct: 478 LFL 480
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,300,288
Number of extensions: 392798
Number of successful extensions: 1353
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1340
Number of HSP's successfully gapped: 5
Length of query: 546
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 443
Effective length of database: 8,282,721
Effective search space: 3669245403
Effective search space used: 3669245403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 114 (48.5 bits)