BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0641300 Os04g0641300|AK071780
(443 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391 185 4e-47
AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429 177 1e-44
AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418 162 3e-40
AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275 160 1e-39
AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369 153 2e-37
AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403 151 6e-37
AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274 144 9e-35
AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335 139 4e-33
AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385 136 2e-32
AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240 129 3e-30
AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315 126 2e-29
AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402 111 7e-25
AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201 84 1e-16
>AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391
Length = 390
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 117/172 (68%), Gaps = 9/172 (5%)
Query: 279 RPPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLG 338
R G ++ V+YFTSLRG+RKT+ DCC++R IL+S G+R+DERDVSMH+ F+ EL +LL
Sbjct: 219 RKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLL- 277
Query: 339 PGGFACAA---LPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAA 395
G F LPRVF+ +YLGG E++ L+E EL ++++ CE G+ C A
Sbjct: 278 EGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEA 337
Query: 396 CGDVRFVPCETCYGSCKIFV-----DDDVDAGEFRRCPDCNENGLIRCPVCC 442
CGDVRFVPCETC GSCK++ D+ V F+RCP CNENGLIRC VCC
Sbjct: 338 CGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389
>AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429
Length = 428
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 117/180 (65%), Gaps = 21/180 (11%)
Query: 283 GDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGP--G 340
G ++ ++YFTSLRG+RKT+ + C VR IL+S G+R+DERDVSMH+ F+ EL ELLG
Sbjct: 249 GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFN 308
Query: 341 GFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGDVR 400
LPRVF+ +Y+GGAE++ L+E +L ++L GCE + G C ACGDVR
Sbjct: 309 KGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVR 368
Query: 401 FVPCETCYGSCKIF------------------VDDDVDAGEFRRCPDCNENGLIRCPVCC 442
FVPCETC GSCK++ V ++ + G F+ CPDCNENGLIRCPVCC
Sbjct: 369 FVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYG-FQTCPDCNENGLIRCPVCC 427
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 93 IKPCTPTLTPPNEPEVINAWELMAGLED--------------DPPTPPCASHEPPAVTPQ 138
I P TP +TPP EPE IN WE+M GLED P +V P
Sbjct: 127 IVPKTPIVTPPGEPETINTWEMMDGLEDVLSPLRSPNHVKSFSFDVGPNGGKSNGSVKPV 186
Query: 139 WMQADTDIPIVALDFDPEILSGFREALADTSPSEPTSCSVTEEEEQP 185
W+Q + + DPEI+S FR++L + P S + E +P
Sbjct: 187 WLQMEEEEEGFEDF-DPEIISSFRKSLQELPSDHPFHISNHDFELKP 232
>AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418
Length = 417
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 108/167 (64%), Gaps = 9/167 (5%)
Query: 276 AHLRPPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAE 335
A R PG + K V+YFT+LRG+RKT+ DCC VR+ILR V +DERD+SM + +R EL
Sbjct: 259 AKPRLPGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDISMDSKYRKELQS 318
Query: 336 LLGPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAA 395
+LG LP+VF+ G ++GG E++ L++ ELA ML+ A +LG C +
Sbjct: 319 VLG-AAEKPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPAC--ERLG---TCRS 372
Query: 396 CGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVCC 442
CGD RFVPC C GS K+F + D F+RCP CNENGL+RC VCC
Sbjct: 373 CGDARFVPCTNCDGSTKVFEEQD---ERFKRCPKCNENGLVRCRVCC 416
>AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275
Length = 274
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 11/164 (6%)
Query: 278 LRPPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELL 337
+R PG + + VVYFTSLRG+R+T+ DC +VR I R + V +DERDVSM +R EL +
Sbjct: 120 IRLPGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQIAM 179
Query: 338 GPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACG 397
G +LP+VF+ G+Y+GGA+ + +L E ELA++L + P+R+ G++ C CG
Sbjct: 180 GE---KSVSLPQVFIMGKYVGGADVIKSLFEIGELAKIL---KEFPMRQPGFV--CHCCG 231
Query: 398 DVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
D+RFVPC C GS K+F D D +RCP+CNENGLIRCP C
Sbjct: 232 DIRFVPCSNCSGSKKLF---DEDEDRVKRCPECNENGLIRCPDC 272
>AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369
Length = 368
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 131/246 (53%), Gaps = 20/246 (8%)
Query: 209 KRADACDAPVSLA----TGDMPEKRADACDKTISLATGDMPELSGIVRARINAFQEKIER 264
KR+ A P ++ T M + R ++ D+T S + SG + N F ++
Sbjct: 127 KRSIAAQIPTTMVKLKRTESMSKLRPESDDRTESTQSS----YSGPRSVKENIFVKRDRE 182
Query: 265 RSSKGARDAKVAH---LR------PPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYG 315
R K V + LR PPGG + +VY TSL+GVR+T+ DC VR+I+ G
Sbjct: 183 RREKEGNKKPVMNWDPLREFPEKCPPGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQG 242
Query: 316 VRLDERDVSMHAVFRAELAELLGPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARM 375
V +DERDVS+ A +EL ELL A A PRVFV GRYLGGA +V A++E +L R+
Sbjct: 243 VVVDERDVSLDAGVLSELKELL--QDEASVAPPRVFVKGRYLGGAAEVTAMNENGKLGRV 300
Query: 376 LEGCEAAPVRKLGYMEACAACGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGL 435
L V + G + C CG R++PC C GSCK+ + RC CNENGL
Sbjct: 301 LRWARVERVGEEGRL-TCEGCGGARWLPCFECGGSCKVAAVGAAKGERWERCVKCNENGL 359
Query: 436 IRCPVC 441
IRCPVC
Sbjct: 360 IRCPVC 365
>AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403
Length = 402
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 104/168 (61%), Gaps = 16/168 (9%)
Query: 278 LRPPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELL 337
L + K VVYFTSLRG+RKT+ DCC VR+ILR + V ++ERD+SM + +R EL L
Sbjct: 247 LEKEDNENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQNAL 306
Query: 338 GPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLE---GCEAAPVRKLGYMEACA 394
G C LP+VF+ G +GG E++ L++ ELA ML+ CE+ + AC
Sbjct: 307 GEEKPVC--LPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACES--------IGACD 356
Query: 395 ACGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVCC 442
+CGD RFVPC C GS K+F + + F+RC CNENGL+RC CC
Sbjct: 357 SCGDARFVPCTNCGGSTKVFEEQE---DGFKRCNGCNENGLVRCNKCC 401
>AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274
Length = 273
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 98/169 (57%), Gaps = 20/169 (11%)
Query: 281 PGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGP- 339
PG +K VVYFTSLR VR TF C SV SIL S+ VR+DERD+SM A F EL + G
Sbjct: 109 PGAEKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIFGKD 168
Query: 340 -----GGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYME--A 392
LPRVF+ GRY+GGAE+V LHE EL ++ V++L +E
Sbjct: 169 QNQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKL--------VQELPKIEPGV 220
Query: 393 CAACGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
C CG RFVPC+ C+GS K+ + FR C CNENGL+RC C
Sbjct: 221 CEMCGGHRFVPCKDCHGSHKV----HTEKLGFRTCLTCNENGLVRCSSC 265
>AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335
Length = 334
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 272 DAKVAHLRPPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRA 331
D K + PPGG+ + V+Y TSLRGVR+TF C +VR+ + S+GV + ERDVSM FR
Sbjct: 163 DEKFERICPPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFRE 222
Query: 332 ELAELLGP--GGFACAAL-PRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLG 388
EL L+ G AAL PRVFV GRY+GG E+V L E ++ G P +K G
Sbjct: 223 ELVSLMAKRVGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELISG---IPRKKAG 279
Query: 389 YME--ACAACGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
E AC CG + F+PC C GSCK+ V A RC +CNENGL+ CP+C
Sbjct: 280 GCESGACDGCGGLFFLPCFRCNGSCKM-VKGWGSASVVVRCNECNENGLVPCPIC 333
>AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385
Length = 384
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 97/162 (59%), Gaps = 10/162 (6%)
Query: 280 PPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGP 339
PPGG+ V+Y T+LRG+RKTF DC VRSIL S+ VR ERDVSMH+VF+ E+ ++G
Sbjct: 232 PPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGT 291
Query: 340 GGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGDV 399
+P VFV GR +G E+V L E +L +LEG AA + C CG +
Sbjct: 292 ---KHVKIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARL----GGSCCRGCGGM 344
Query: 400 RFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
RF+ C C GSCK+ + + +C CNENGL+ CP+C
Sbjct: 345 RFMMCVVCNGSCKV---REEEKKSMVKCLKCNENGLVLCPIC 383
>AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240
Length = 239
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 15/166 (9%)
Query: 280 PPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGP 339
PPGG+ V Y T LR VRKTF C VR +L ++ V ERDVSM + FR E+ LLG
Sbjct: 84 PPGGEDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFREEMWRLLGG 143
Query: 340 GGFACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGDV 399
PR+F+ GRY+GGAE+V AL+E +L ++L+G C +C +
Sbjct: 144 K----VTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGISQVD-------SPCESCENE 192
Query: 400 RFVPCETCYGSCKIFV----DDDVDAGEFRRCPDCNENGLIRCPVC 441
RF+ C +C GS ++ ++ + + RC +CNENGL++CP+C
Sbjct: 193 RFLICSSCNGSTRLLAEHHDEESSNDNMWTRCRECNENGLVKCPLC 238
>AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315
Length = 314
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 282 GGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGPGG 341
GG+ + V+Y TSLRGVR+TF C +VR+ + S+GV + ERDVSM FR EL+ L+
Sbjct: 158 GGENRVVIYTTSLRGVRRTFEACNAVRAAIESFGVVVCERDVSMDRGFREELSNLMAVES 217
Query: 342 FACAALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGDVRF 401
A PRVFV G+Y+GGAE+V L E L +L + P +K C CG + F
Sbjct: 218 TAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELL---KEIPRKKDRCGGGCGGCGGLAF 274
Query: 402 VPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
+PC C GSCK+ DA +C +CNENGL+RCP+C
Sbjct: 275 LPCSGCNGSCKVVEGWGNDA-VVVKCKECNENGLVRCPIC 313
>AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402
Length = 401
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 280 PPGGDKKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGP 339
PPGG++ V Y T+LRG+RKTF DC +R +L S+ V+ ERDVSMH +R EL +
Sbjct: 251 PPGGEESVVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREYREELRRI--- 307
Query: 340 GGFACAALPRV-FVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGD 398
LP V FV GR +GGA+ V LHE + + EG P+ E C C
Sbjct: 308 SAAETEVLPPVLFVKGRCIGGAQRVLGLHEQGKFKILFEG---IPITG---DERCRRCDG 361
Query: 399 VRFVPCETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVC 441
RF+ C+ C GS +I D G +C CNENGLI C C
Sbjct: 362 FRFLMCDGCRGSRRIISGD----GSRIQCLICNENGLIVCVGC 400
>AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201
Length = 200
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 14/133 (10%)
Query: 309 SILRSYGVRLDERDVSMHAVFRAELAELLGPGGFACAALPRVFVDGRYLGGAEDVHALHE 368
S+ S ERDVSM ++ E+ LLG PR+F+ +Y+GGA++V +L+E
Sbjct: 81 SVASSQQASFRERDVSMDCEYKEEMWRLLGEQ----VTPPRLFIKCKYIGGADEVVSLNE 136
Query: 369 AAELARMLEGCEAAPVRKLGYMEACAACGDVRFVPCETCYGSCKIFVDDDVDAGEFRRCP 428
+L ++LE +A R+ C C + RF+ C C G ++ + + ++RC
Sbjct: 137 NEKLKKLLEVFSSAKSRQ------CEMCENERFLICSKCNGRSRVVAEHET----WKRCI 186
Query: 429 DCNENGLIRCPVC 441
+CNENGL++C +C
Sbjct: 187 ECNENGLVKCALC 199
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,331,299
Number of extensions: 463166
Number of successful extensions: 1660
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 1636
Number of HSP's successfully gapped: 14
Length of query: 443
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 341
Effective length of database: 8,310,137
Effective search space: 2833756717
Effective search space used: 2833756717
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)