BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0631600 Os04g0631600|AK069366
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61660.1 | chr1:22754003-22756171 REVERSE LENGTH=394 166 2e-41
AT3G20640.1 | chr3:7210654-7213199 REVERSE LENGTH=455 145 5e-35
AT4G21340.1 | chr4:11353064-11354628 FORWARD LENGTH=302 125 3e-29
AT4G05170.1 | chr4:2667990-2669187 REVERSE LENGTH=239 121 6e-28
AT1G27660.1 | chr1:9621701-9625666 FORWARD LENGTH=454 121 6e-28
AT2G20100.1 | chr2:8678185-8681809 FORWARD LENGTH=363 111 6e-25
AT3G19500.1 | chr3:6759289-6760893 REVERSE LENGTH=271 109 2e-24
AT4G29100.1 | chr4:14341140-14344575 FORWARD LENGTH=408 107 2e-23
AT2G31730.1 | chr2:13487783-13488593 REVERSE LENGTH=154 101 6e-22
AT1G31050.1 | chr1:11075720-11079140 REVERSE LENGTH=435 100 2e-21
AT1G05710.2 | chr1:1716198-1717023 FORWARD LENGTH=172 92 7e-19
AT1G49830.1 | chr1:18445111-18446659 REVERSE LENGTH=251 85 1e-16
AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311 61 1e-09
AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298 60 3e-09
AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351 60 3e-09
>AT1G61660.1 | chr1:22754003-22756171 REVERSE LENGTH=394
Length = 393
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 99/134 (73%), Gaps = 7/134 (5%)
Query: 309 ETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHD 368
E+A KKPR+ TPSPLPTFKVRKE L D+IT+LQQLVSPFGKTDTASVL E IEYIKFLHD
Sbjct: 262 ESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHD 321
Query: 369 QVGALSAPYLKNGAHQVPHL----KNSSPDKSKHGEISLKGRGLCLVPISSTFAVASEVP 424
QV LS PY+K GA K+ S D++++ E L+G GLCLVPISSTF VA+E
Sbjct: 322 QVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHE--LRGHGLCLVPISSTFPVANETT 379
Query: 425 VELWTP-FGANFIR 437
+ WTP FG N R
Sbjct: 380 ADFWTPTFGGNNFR 393
>AT3G20640.1 | chr3:7210654-7213199 REVERSE LENGTH=455
Length = 454
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 97/148 (65%), Gaps = 15/148 (10%)
Query: 298 VGDSSSVITKK-----ETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDT 352
+ DSSS K+ + A K+ + E SP P FK RKEK+GDRI ALQQLVSPFGKTD
Sbjct: 311 IRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFK-RKEKMGDRIAALQQLVSPFGKTDA 369
Query: 353 ASVLHETIEYIKFLHDQVGALSAPYLKNGAHQVPHLKNSSPDKSKHGEIS----LKGRGL 408
ASVL E IEYIKFLH QV ALS PY+K+GA L++ D S E+S L+ RGL
Sbjct: 370 ASVLSEAIEYIKFLHQQVSALSNPYMKSGA----SLQHQQSDHSTELEVSEEPDLRSRGL 425
Query: 409 CLVPISSTFAVASEVPVELWTP-FGANF 435
CLVP+SSTF V + V+ WTP FG F
Sbjct: 426 CLVPVSSTFPVTHDTTVDFWTPTFGGTF 453
>AT4G21340.1 | chr4:11353064-11354628 FORWARD LENGTH=302
Length = 301
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 7/115 (6%)
Query: 312 FKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQV- 370
K+PRLETPS P+FKVRKEKLGDRITALQQLVSPFGKTDTASVLH+ I+YIKFL +Q+
Sbjct: 175 LKRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQIT 234
Query: 371 -GALSAPYLKN-GAHQVPHLKNSSPDKSKHGEIS----LKGRGLCLVPISSTFAV 419
++P+L + G+ + + S + + + S L+ RGLCL+PISSTF+
Sbjct: 235 EKVSTSPHLNSIGSGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISSTFST 289
>AT4G05170.1 | chr4:2667990-2669187 REVERSE LENGTH=239
Length = 238
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 74/113 (65%), Gaps = 11/113 (9%)
Query: 312 FKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVG 371
K+PRLET SPLP+FKVRKEKLGDRITALQQLVSPFGKTDTASVL+E +EYIKFL +QV
Sbjct: 98 LKRPRLETLSPLPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVT 157
Query: 372 ALSAPYLKN-GAHQVPHLKN----------SSPDKSKHGEISLKGRGLCLVPI 413
LS P G+ Q N + S + L RGLCL+PI
Sbjct: 158 VLSNPEQNTIGSVQQQQCSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPI 210
>AT1G27660.1 | chr1:9621701-9625666 FORWARD LENGTH=454
Length = 453
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Query: 309 ETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHD 368
E A KKPR+E+ S P FKVRKEKLGDRI ALQQLVSPFGKTDTASVL E I YIKFL
Sbjct: 314 ENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQS 373
Query: 369 QVGALSAPYL---KNGAHQVPHLKNSSPDKSKHGEISLKGRGLCLVPIS 414
Q+ LS PY+ +N + L + S + + L+ RGLCLVP+S
Sbjct: 374 QIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLS 422
>AT2G20100.1 | chr2:8678185-8681809 FORWARD LENGTH=363
Length = 362
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 86/169 (50%), Gaps = 34/169 (20%)
Query: 301 SSSVITKKETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETI 360
+SS + A KKP+L+ PS T KVRKEKLG RI +L QLVSPFGKTDTASVL E I
Sbjct: 193 NSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAI 252
Query: 361 EYIKFLHDQVGALSAPYL-----KNGAHQ---------VPH----------------LKN 390
YI+FLH Q+ ALS PY N HQ P L +
Sbjct: 253 GYIRFLHSQIEALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSS 312
Query: 391 SSPDKSKHGE---ISLKGRGLCLVPISSTFAVASEVPVELWTP-FGANF 435
+ KS E L+ RGLCLVPIS T V S+ + W P FG
Sbjct: 313 TDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNGADYWAPAFGTTL 361
>AT3G19500.1 | chr3:6759289-6760893 REVERSE LENGTH=271
Length = 270
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 297 GVGDSSSVITKKETAFKKPRLETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVL 356
G G+ ++ K R + S + KVRKE+LG+RI ALQQLVSP+GKTD ASVL
Sbjct: 124 GTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVL 183
Query: 357 HETIEYIKFLHDQVGALSAPYLKNGAHQVPHLKNSSPDKSKHGEISLKGRGLCLVPISST 416
HE + YIKFL DQ+ L +PYL N H + + + L+ RGLCLVP+SST
Sbjct: 184 HEAMGYIKFLQDQIQVLCSPYLIN--HSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSST 241
Query: 417 FAVASEVPVELWTP 430
V + + W+P
Sbjct: 242 VHVENSNGADFWSP 255
>AT4G29100.1 | chr4:14341140-14344575 FORWARD LENGTH=408
Length = 407
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 82/153 (53%), Gaps = 36/153 (23%)
Query: 313 KKPRLE-TPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVG 371
KKPRL+ +PS T KVRKEKLG RI AL QLVSPFGKTDTASVL E I YI+FL Q+
Sbjct: 248 KKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIE 307
Query: 372 ALSAPYL-----KNGAHQVPHLK--------------------------NSSPDK---SK 397
ALS PY N HQ HL+ +SS D S+
Sbjct: 308 ALSHPYFGTTASGNMRHQQ-HLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNASE 366
Query: 398 HGEISLKGRGLCLVPISSTFAVASEVPVELWTP 430
+ L+ RGLCLVPIS T V S+ + W P
Sbjct: 367 EPKKDLRSRGLCLVPISCTLQVGSDNGADYWAP 399
>AT2G31730.1 | chr2:13487783-13488593 REVERSE LENGTH=154
Length = 153
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 68/104 (65%), Gaps = 9/104 (8%)
Query: 327 KVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGAHQVP 386
K RK+KL +RI+ALQQLVSP+GKTDTASVL E ++YI+FL +QV LSAPYL+
Sbjct: 39 KERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQ------- 91
Query: 387 HLKNSSPDKSKHGEISLKGRGLCLVPISSTFAVASEVPVELWTP 430
S + + E SL+ +GLCLVP+ T VA ++W P
Sbjct: 92 --ATPSTTEEEVEEYSLRSKGLCLVPLEYTSEVAQTNGADIWAP 133
>AT1G31050.1 | chr1:11075720-11079140 REVERSE LENGTH=435
Length = 434
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 324 PTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGAH 383
P ++ K KL D+IT LQQ+VSPFGKTDTASVL E I YI F +QV LS PY+KN +
Sbjct: 317 PEKELPKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINFYQEQVKLLSTPYMKNSSM 376
Query: 384 QVPHLKNSSPDKSKHG--EISLKGRGLCLVPISST-FAVASEVPVELWTP 430
+ P D +K G + L+ RGLCLVPIS T A + W P
Sbjct: 377 KDPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDNSATDYWNP 426
>AT1G05710.2 | chr1:1716198-1717023 FORWARD LENGTH=172
Length = 171
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 35/128 (27%)
Query: 327 KVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVG--------------- 371
K RK+K+G+RI+ALQQ+VSP+GKTDTASVL + + YI+FLH+QV
Sbjct: 37 KERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVCSSIPSMIHSSLSE 96
Query: 372 -------ALSAPYLKNGAHQVPHLKNSSPDKSKH--GEISLKGRGLCLVPISSTFAVASE 422
LSAPYL+ + PD ++ + SL+ RGLCLVP+ +T VA
Sbjct: 97 FPCSFVQVLSAPYLQ-----------TVPDATQEELEQYSLRNRGLCLVPMENTVGVAQS 145
Query: 423 VPVELWTP 430
++W P
Sbjct: 146 NGADIWAP 153
>AT1G49830.1 | chr1:18445111-18446659 REVERSE LENGTH=251
Length = 250
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 58/100 (58%), Gaps = 17/100 (17%)
Query: 337 ITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGAHQVPHLKNSSPDKS 396
IT LQ LVSP+GKTD ASVLHET+ YIKFL DQV LS PY K+ D
Sbjct: 134 ITTLQHLVSPYGKTDAASVLHETMGYIKFLQDQVQVLSTPYFKHNPL----------DDE 183
Query: 397 KHGEIS-------LKGRGLCLVPISSTFAVASEVPVELWT 429
GE++ L+ GLCLVP++ T VA+ +LW+
Sbjct: 184 DTGEVNPTMKVKELRSNGLCLVPLAWTVHVANTNGADLWS 223
>AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311
Length = 310
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 24/112 (21%)
Query: 327 KVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGA---H 383
++R+E++ +R+ +LQ+LV KTD AS+L E I+Y+KFL QV LS L A
Sbjct: 146 RLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 205
Query: 384 QV------PHLKNSSPDKSKHGEIS---------------LKGRGLCLVPIS 414
Q+ H SS ++K E L+G+GLCL+PIS
Sbjct: 206 QISEDAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPIS 257
>AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 42/137 (30%)
Query: 327 KVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKNGAHQVP 386
++R+E++ +R+ +LQ+LV KTD AS+L E IEY++FL QV LS L P
Sbjct: 115 RLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGP 174
Query: 387 HLKNSSPD-----------------------------KSKHGEIS-------------LK 404
L S + +S ++ L+
Sbjct: 175 RLNGLSAEAGGRLNALTAPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQ 234
Query: 405 GRGLCLVPISSTFAVAS 421
G+GLCL+PIS A++S
Sbjct: 235 GKGLCLMPISLATAISS 251
>AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 35/130 (26%)
Query: 327 KVRKEKLGDRITALQQLVSPFGKTDTASVLHETIEYIKFLHDQVGALSAPYLKN------ 380
++R+E++ +R+ ALQ+LV KTD AS+L E I+Y+KFL QV LS L
Sbjct: 154 RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSS 213
Query: 381 -----------------GAHQVPHLKNSSPDKSKHGEIS------------LKGRGLCLV 411
G Q N S ++H L+G+GLCL+
Sbjct: 214 QISEAGGSHGNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLM 273
Query: 412 PISSTFAVAS 421
PIS A+++
Sbjct: 274 PISLATAIST 283
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.127 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,707,825
Number of extensions: 262585
Number of successful extensions: 696
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 691
Number of HSP's successfully gapped: 17
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)