BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0627200 Os04g0627200|Os04g0627200
(399 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63270.1 | chr1:23469664-23470353 REVERSE LENGTH=230 336 2e-92
AT1G67940.1 | chr1:25477805-25478667 FORWARD LENGTH=264 56 3e-08
AT2G41700.1 | chr2:17383239-17396110 REVERSE LENGTH=1883 55 5e-08
AT3G28860.1 | chr3:10870287-10877286 REVERSE LENGTH=1253 53 3e-07
AT1G27940.1 | chr1:9733597-9738129 REVERSE LENGTH=1246 53 4e-07
AT4G01830.1 | chr4:785683-790447 REVERSE LENGTH=1231 52 4e-07
AT1G28010.1 | chr1:9763436-9767917 FORWARD LENGTH=1248 52 5e-07
AT2G47000.1 | chr2:19310008-19314750 REVERSE LENGTH=1287 52 7e-07
AT5G64840.1 | chr5:25916956-25919693 REVERSE LENGTH=693 52 8e-07
AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297 52 8e-07
AT1G02530.1 | chr1:529836-534542 FORWARD LENGTH=1274 50 2e-06
AT5G09930.1 | chr5:3097643-3100241 REVERSE LENGTH=679 49 5e-06
AT3G13220.1 | chr3:4247968-4250703 REVERSE LENGTH=686 49 5e-06
>AT1G63270.1 | chr1:23469664-23470353 REVERSE LENGTH=230
Length = 229
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 159/207 (76%), Positives = 178/207 (85%)
Query: 16 VSCMRNAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDIT 75
VSCMRNAQ +LR +NVS+H+ ALVLTG NGSGKSTFLRMLAGFS+PSAGE+LWNGHDIT
Sbjct: 16 VSCMRNAQQILRHVNVSLHDGGALVLTGTNGSGKSTFLRMLAGFSKPSAGEILWNGHDIT 75
Query: 76 SPGVFQQYKLQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGRLMNEK 135
G+FQQYKLQLNW+SLKDA+KE+ TVLDNVQWFELLE K GK+ PA+ELMGLGRL+ EK
Sbjct: 76 QSGIFQQYKLQLNWISLKDAIKERFTVLDNVQWFELLENKIGKAQPALELMGLGRLVKEK 135
Query: 136 ARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVAT 195
+RMLSMG IDRPIWLLDEPSVALD EGV+LLEYIIAEHRKKGGIV VAT
Sbjct: 136 SRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVRLLEYIIAEHRKKGGIVIVAT 195
Query: 196 HLPIEIEDAMSLRLPQRFPRRKTLVDL 222
HLPI+IEDAM LRLP RFPR+ TL+D+
Sbjct: 196 HLPIDIEDAMILRLPPRFPRKMTLIDM 222
>AT1G67940.1 | chr1:25477805-25478667 FORWARD LENGTH=264
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 21 NAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVF 80
+ +L+ + + + + + + G +GSGKSTFLR L P V +G DIT+ V
Sbjct: 40 DGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVI 99
Query: 81 QQYKLQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGRLMNEKARM-- 138
+ M + V + TV DNV++ L G+ +L+ L L A+
Sbjct: 100 ALRRRV--GMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTG 157
Query: 139 --LSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFV 193
LS+G + + LLDEP+ ALD + +E +I + +K+ GI V
Sbjct: 158 AELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTV 214
>AT2G41700.1 | chr2:17383239-17396110 REVERSE LENGTH=1883
Length = 1882
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 20 RNAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGV 79
R + + ++++E L L G NG+GKST + ML G P++G+ L G+ I +
Sbjct: 562 RGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITN-- 619
Query: 80 FQQYKLQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAI-----ELMGLGRLMNE 134
+ + +L D + +LTV ++++ F +L+G S + E +GL +N
Sbjct: 620 MDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVDMAEEVGLSDKINT 679
Query: 135 KARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKL 176
R LS G + + +LDEP+ +D ++L
Sbjct: 680 LVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRL 721
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 23 QAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDI-TSPGVFQ 81
+ ++ + SV G NG+GK+T L ML+G P++G G DI SP +
Sbjct: 1471 KVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGTAFIFGKDIVASPKAIR 1530
Query: 82 QYKLQLNWMSLKDAVKEKLTVLDNVQWFELLEG--KHGKSAPAIELM---GLGRLMNEKA 136
Q+ + + DA+ E LTV ++++ + ++G H E + L + ++ +
Sbjct: 1531 QH---IGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVTEKLVEFDLLKHSHKPS 1587
Query: 137 RMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGG--IVFVA 194
LS G D PI +LDEPS +D + + +I+ + G V +
Sbjct: 1588 FTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVILT 1647
Query: 195 TH 196
TH
Sbjct: 1648 TH 1649
>AT3G28860.1 | chr3:10870287-10877286 REVERSE LENGTH=1253
Length = 1252
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
V RD N+ + + L GA+GSGKS+ + M+ F P AG+V+ +G DI +
Sbjct: 1027 VFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPLAGKVMIDGKDIR--------R 1078
Query: 85 LQLNWMSLKDAVKEK------LTVLDNVQWFELLEGKHGKSAPAIELMGLGRLMN----- 133
L L + LK + ++ T+ DN+ + GK G A E++ R N
Sbjct: 1079 LNLKSLRLKIGLVQQEPALFAATIFDNIAY-----GKDG--ATESEVIDAARAANAHGFI 1131
Query: 134 ------------EKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYII 181
E+ LS G + + LLDE + ALDAE +L+ +
Sbjct: 1132 SGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKNPTVLLLDEATSALDAESECVLQEAL 1191
Query: 182 AEHRKKGGIVFVATH 196
E +G V H
Sbjct: 1192 -ERLMRGRTTVVVAH 1205
>AT1G27940.1 | chr1:9733597-9738129 REVERSE LENGTH=1246
Length = 1245
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 10/182 (5%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
V +++ ++ G +GSGKST + M+ F P++GE+L +G+DI S + + ++
Sbjct: 388 VFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNSGEILLDGNDIKSLKL-KWFR 446
Query: 85 LQLNWMSLKDAV------KEKLTVLDNVQWFELLEGKHGKSAPA-IELM--GLGRLMNEK 135
QL +S + A+ L +N +++E +A + I+ + G + E
Sbjct: 447 EQLGLVSQEPALFATTIASNILLGKENANMDQIIEAAKAANADSFIKSLPNGYNTQVGEG 506
Query: 136 ARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVAT 195
LS G + I LLDE + ALDAE K+++ + +K + VA
Sbjct: 507 GTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVVAH 566
Query: 196 HL 197
L
Sbjct: 567 RL 568
>AT4G01830.1 | chr4:785683-790447 REVERSE LENGTH=1231
Length = 1230
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 37 TALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYKLQLNWMSLKDAV 96
T L G +GSGKST + ++ F P++G+VL +G D+ + QL W+ K +
Sbjct: 382 TTTALVGESGSGKSTVISLIERFYDPNSGQVLIDGVDLK--------EFQLKWIRGKIGL 433
Query: 97 KEKLTVLDNVQWFE-LLEGKHGKSAPAIEL---------------MGLGRLMNEKARMLS 140
+ VL + E + GK G + I+ +GL L+ E LS
Sbjct: 434 VSQEPVLFSSSIMENIGYGKEGATVEEIQAASKLANAAKFIDKLPLGLETLVGEHGTQLS 493
Query: 141 MGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
G D I LLDE + ALDAE ++++
Sbjct: 494 GGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQ 531
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
V RD+ +S+ + L G +GSGKST + +L F P +G + +G ++ K
Sbjct: 1002 VFRDLCLSIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVELK--------K 1053
Query: 85 LQLNWMSLK-DAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGRLMN---------- 133
L+L W+ + V ++ + ++ + GK G+ A E++ L N
Sbjct: 1054 LRLKWLRQQMGLVGQEPVLFNDTIRANIAYGKGGEEATEAEIIAASELANAHRFISSIQK 1113
Query: 134 -------EKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
E+ LS G + I LLDE + ALDAE ++++
Sbjct: 1114 GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQ 1165
>AT1G28010.1 | chr1:9763436-9767917 FORWARD LENGTH=1248
Length = 1247
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 24/189 (12%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
V +++ ++H G +GSGKST + M+ F P +GE+L +G+DI +
Sbjct: 389 VFENLSFTIHSGKTFAFVGPSGSGKSTIISMVQRFYEPRSGEILLDGNDIKN-------- 440
Query: 85 LQLNWMSLK-DAVKEKLTVLDNVQWFELLEGKH----------GKSAPAIELM-----GL 128
L+L W+ + V ++ + +L GK K+A A + G
Sbjct: 441 LKLKWLREQMGLVSQEPALFATTIASNILLGKEKANMDQIIEAAKAANADSFIKSLPNGY 500
Query: 129 GRLMNEKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKG 188
+ E LS G + I LLDE + ALDAE K+++ + +K
Sbjct: 501 NTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKR 560
Query: 189 GIVFVATHL 197
+ +A L
Sbjct: 561 TTIVIAHRL 569
>AT2G47000.1 | chr2:19310008-19314750 REVERSE LENGTH=1287
Length = 1286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 20 RNAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGV 79
R + + R ++ + T + L G +GSGKST + ++ F P AG+VL +G ++
Sbjct: 396 RPDEQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLK---- 451
Query: 80 FQQYKLQLNWMSLKDAVKEKLTVL------DNVQWFELLEGKHGKSAPAIEL-------- 125
+ QL W+ K + + VL DN+ + GK + I+
Sbjct: 452 ----EFQLKWIRSKIGLVSQEPVLFTASIKDNIAY-----GKEDATTEEIKAAAELANAS 502
Query: 126 -------MGLGRLMNEKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
GL ++ E LS G D I LLDE + ALDAE ++++
Sbjct: 503 KFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQ 562
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
+ +D+ +S+ + L G +GSGKST + +L F P +GE+ +G +I S
Sbjct: 1059 IFQDLCLSIRAGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGVEIKS-------- 1110
Query: 85 LQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELM-----------------G 127
L+L W+ + + + +L N + G A E++ G
Sbjct: 1111 LRLKWLRQQTGLVSQEPILFNETIRANIAYGKGGDASESEIVSSAELSNAHGFISGLQQG 1170
Query: 128 LGRLMNEKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
++ E+ LS G D + LLDE + ALDAE ++++
Sbjct: 1171 YDTMVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQ 1221
>AT5G64840.1 | chr5:25916956-25919693 REVERSE LENGTH=693
Length = 692
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
+ + N+S+ + + G NG GKST L+++ G +P GEV+ H++ P F+Q
Sbjct: 439 LFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVL-PNYFEQ-- 495
Query: 85 LQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGR------LMNEKARM 138
N + D K TVL+ V E + I+ + LGR +++ K +
Sbjct: 496 ---NQAEVLDLDK---TVLETV-----CEAAEDWRSDDIKGL-LGRCNFKADMLDRKVSL 543
Query: 139 LSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVATH 196
LS G + +LDEP+ LD ++LE I E++ G V +H
Sbjct: 544 LSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQ---GTVIAVSH 598
>AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297
Length = 1296
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 25/171 (14%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
+ +D+ +S+ + L G +GSGKST + +L F P +G++ +G +I +
Sbjct: 1069 IFQDLCLSIRAGKTIALVGESGSGKSTVIALLQRFYDPDSGQITLDGVEIKT-------- 1120
Query: 85 LQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGRLMN----------- 133
LQL W+ + + + VL N + G A E++ L N
Sbjct: 1121 LQLKWLRQQTGLVSQEPVLFNETIRANIAYGKGGDATETEIVSAAELSNAHGFISGLQQG 1180
Query: 134 ------EKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
E+ LS G D + LLDE + ALDAE ++++
Sbjct: 1181 YDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQ 1231
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 20 RNAQAVLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGV 79
R + + R ++S+ + + L G +GSGKST + ++ F P +GEV +G ++
Sbjct: 415 RPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEVRIDGINLK---- 470
Query: 80 FQQYKLQLNWMSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELM------------- 126
+ QL W+ K + + VL E + +GK +E +
Sbjct: 471 ----EFQLKWIRSKIGLVSQEPVLFTSSIKENI--AYGKENATVEEIRKATELANASKFI 524
Query: 127 -----GLGRLMNEKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
GL ++ E LS G D I LLDE + ALDAE ++++
Sbjct: 525 DKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQ 581
>AT1G02530.1 | chr1:529836-534542 FORWARD LENGTH=1274
Length = 1273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYK 84
+ RD+ +++ + L G +GSGKST + +L F P +G++ +G ++ K
Sbjct: 1044 IFRDLCLTIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGVELK--------K 1095
Query: 85 LQLNWMSLK-DAVKEKLTVLDNVQWFELLEGKHGKSA-------PAIEL----------- 125
LQL W+ + V ++ + ++ + GK + A A EL
Sbjct: 1096 LQLKWLRQQMGLVGQEPVLFNDTIRANIAYGKGSEEAATESEIIAAAELANAHKFISSIQ 1155
Query: 126 MGLGRLMNEKARMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLE 178
G ++ EK LS G + I LLDE + ALDAE +L++
Sbjct: 1156 QGYDTVVGEKGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERLVQ 1208
>AT5G09930.1 | chr5:3097643-3100241 REVERSE LENGTH=679
Length = 678
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 30 NVSVHERTALVLTGANGSGKSTFLRMLAGFSRPSAGEVLWNGHDITSPGVFQQYKLQLNW 89
N+++ + + G NG GKST L+++ G +P GEV+ H++ P F+Q N
Sbjct: 430 NLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVILGEHNVL-PNYFEQ-----NQ 483
Query: 90 MSLKDAVKEKLTVLDNVQWFELLEGKHGKSAPAIELMGLGR------LMNEKARMLSMGX 143
+D K TV++ V +E I+ + LGR +++ K +LS G
Sbjct: 484 AEAQDLDK---TVIETV-----VEAAVDWRIDDIKAL-LGRCNFKADMLDRKVSLLSGGE 534
Query: 144 XXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVATH 196
+ +LDEP+ LD ++LE I E++ G V +H
Sbjct: 535 KARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYK---GTVITVSH 584
>AT3G13220.1 | chr3:4247968-4250703 REVERSE LENGTH=686
Length = 685
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 25 VLRDINVSVHERTALVLTGANGSGKSTFLRMLAG-FSRPSAGEVLWNGHDI-TSPGVFQQ 82
+L+ I S L L G +GSGK+T L+++ G + G++ +N DI SP V
Sbjct: 106 ILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVKGKLTYN--DIPYSPSV--- 160
Query: 83 YKLQLNWMSLKDAVKEKLTVLDNVQWFELL--------EGKHGKSAPAIELMGLGRLMNE 134
K ++ +++ D + +LTV + + + L E K+ K I+ +GL R
Sbjct: 161 -KRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERCRRT 219
Query: 135 KA-----RMLSMGXXXXXXXXXXXXIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGG 189
+ + +S G +D + LLDEP+ LD+ L +I+ K G
Sbjct: 220 RVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGR 279
Query: 190 IVFVATHLP 198
V H P
Sbjct: 280 TVITTIHQP 288
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,049,403
Number of extensions: 320273
Number of successful extensions: 983
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 981
Number of HSP's successfully gapped: 20
Length of query: 399
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 298
Effective length of database: 8,337,553
Effective search space: 2484590794
Effective search space used: 2484590794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)