BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0623500 Os04g0623500|AK068638
(389 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14420.1 | chr3:4821804-4823899 FORWARD LENGTH=368 609 e-175
AT4G18360.1 | chr4:10146141-10148386 REVERSE LENGTH=369 606 e-174
AT3G14415.2 | chr3:4818667-4820748 FORWARD LENGTH=374 595 e-170
AT3G14130.1 | chr3:4685844-4687852 REVERSE LENGTH=364 452 e-127
AT3G14150.1 | chr3:4690667-4692679 REVERSE LENGTH=364 441 e-124
>AT3G14420.1 | chr3:4821804-4823899 FORWARD LENGTH=368
Length = 367
Score = 609 bits (1570), Expect = e-175, Method: Compositional matrix adjust.
Identities = 287/362 (79%), Positives = 321/362 (88%)
Query: 26 ITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMAT 85
ITNV+EY+ +AKQKLPKM+YDYYASGAEDQWTL+ENR AF+RILFRPRILIDVS+I+M T
Sbjct: 3 ITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDMTT 62
Query: 86 NVLGFNISMPIMIAPSAMQKMAHPEGELXXXXXXXXXGTIMTLSSWSTSSVEEVNSAAPG 145
VLGF ISMPIM+AP+AMQKMAHP+GE GTIMTLSSW+TSSVEEV S PG
Sbjct: 63 TVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPG 122
Query: 146 IRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKN 205
IRFFQLYVYK+RN+V QLVRRAE AGFKAIALTVDTPRLGRRE+DIKNRF LPP+L LKN
Sbjct: 123 IRFFQLYVYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKN 182
Query: 206 FEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTRLAV 265
FE LDLGKMD+ NDSGLASYVA Q+DR+LSW DV+WLQTIT LPILVKGV+T ED R+A+
Sbjct: 183 FEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAI 242
Query: 266 ESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGA 325
++GAAGIIVSNHGARQLDYVPATIS LEEVV+ +GR+PVFLDGGVRRGTDVFKALALGA
Sbjct: 243 QAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 302
Query: 326 SGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDSDRIR 385
SG+FIGRPV+FSLA +GEAGVRKVLQMLRDE ELTMALSGC SL EI+RNH+ T+ D R
Sbjct: 303 SGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPR 362
Query: 386 RS 387
S
Sbjct: 363 PS 364
>AT4G18360.1 | chr4:10146141-10148386 REVERSE LENGTH=369
Length = 368
Score = 606 bits (1563), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/357 (81%), Positives = 318/357 (89%)
Query: 26 ITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMAT 85
ITNV EYE++AK+KLPKM+YDYYASGAEDQWTL+ENR AFSRILFRPRILIDVS+I+++T
Sbjct: 3 ITNVMEYEKIAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDVST 62
Query: 86 NVLGFNISMPIMIAPSAMQKMAHPEGELXXXXXXXXXGTIMTLSSWSTSSVEEVNSAAPG 145
VLGFNISMPIMIAP+AMQKMAHP+GEL GTIMTLSSW+T SVEEV S PG
Sbjct: 63 TVLGFNISMPIMIAPTAMQKMAHPDGELATARATSAAGTIMTLSSWATCSVEEVASTGPG 122
Query: 146 IRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKN 205
IRFFQLYVYKDRN+V QLV+RAE AGFKAIALTVDTPRLGRRE+DIKNRF LP L LKN
Sbjct: 123 IRFFQLYVYKDRNVVIQLVKRAEEAGFKAIALTVDTPRLGRRESDIKNRFALPRGLTLKN 182
Query: 206 FEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTRLAV 265
FE LDLGK+DKTNDSGLASYVA QVD+SLSW D+KWLQ+ITSLPILVKGV+TAED R+AV
Sbjct: 183 FEGLDLGKIDKTNDSGLASYVAGQVDQSLSWKDIKWLQSITSLPILVKGVITAEDARIAV 242
Query: 266 ESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGA 325
E GAAGIIVSNHGARQLDYVPATI LEEVV+ +GR+PVFLDGGVRRGTDVFKALALGA
Sbjct: 243 EYGAAGIIVSNHGARQLDYVPATIVALEEVVKAVEGRIPVFLDGGVRRGTDVFKALALGA 302
Query: 326 SGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDSD 382
SGVF+GRP LFSLA DGEAGVRK+LQMLRDE ELTMALSGC SL EI+R H+ TD D
Sbjct: 303 SGVFVGRPSLFSLAADGEAGVRKMLQMLRDEFELTMALSGCRSLREISRTHIKTDWD 359
>AT3G14415.2 | chr3:4818667-4820748 FORWARD LENGTH=374
Length = 373
Score = 595 bits (1533), Expect = e-170, Method: Compositional matrix adjust.
Identities = 280/367 (76%), Positives = 321/367 (87%), Gaps = 6/367 (1%)
Query: 26 ITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMAT 85
ITNV+EY+ +AK KLPKM+YDYYASGAEDQWTL+ENR AF+RILFRPRILIDV++I+MAT
Sbjct: 3 ITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVNKIDMAT 62
Query: 86 NVLGFNISMPIMIAPSAMQKMAHPEGELXXXXXXXXXGTIMTLSSWSTSSVEEVNSAAPG 145
VLGF ISMPIM+AP+A QKMAHP+GE GTIMTLSSW+TSSVEEV S PG
Sbjct: 63 TVLGFKISMPIMVAPTAFQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPG 122
Query: 146 IRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKN 205
IRFFQLYVYK+R +V QLVRRAE AGFKAIALTVDTPRLGRRE+DIKNRF LPP+L LKN
Sbjct: 123 IRFFQLYVYKNRKVVEQLVRRAEKAGFKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKN 182
Query: 206 FEALDLGKMDK------TNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAE 259
FE LDLGKMD+ NDSGLASYVA Q+DR+LSW D++WLQTIT++PILVKGV+T E
Sbjct: 183 FEGLDLGKMDEASIDQIANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGE 242
Query: 260 DTRLAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFK 319
D R+A+++GAAGIIVSNHGARQLDYVPATIS LEEVV+ +GR+PVFLDGGVRRGTDVFK
Sbjct: 243 DARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFK 302
Query: 320 ALALGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVIT 379
ALALGASG+FIGRPV+F+LA +GEAGV+KVLQMLRDE ELTMALSGC SL+EITRNH++T
Sbjct: 303 ALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVT 362
Query: 380 DSDRIRR 386
+ D R
Sbjct: 363 EWDTPRH 369
>AT3G14130.1 | chr3:4685844-4687852 REVERSE LENGTH=364
Length = 363
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 276/363 (76%), Gaps = 3/363 (0%)
Query: 23 MELITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRIN 82
M+ I NV E+++LAKQ LPKM YD+Y GAEDQ TL EN +AF RI+FRPR+L+DVS I+
Sbjct: 1 MDQIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIMFRPRVLVDVSNID 60
Query: 83 MATNVLGFNISMPIMIAPSAMQKMAHPEGELXXXXXXXXXGTIMTLSSWSTSSVEEVNSA 142
M+T++LG+ IS PIMIAP+AM K+AHP+GE+ TIM +S ST ++EEV S+
Sbjct: 61 MSTSMLGYPISAPIMIAPTAMHKLAHPKGEIATAKAAAACNTIMIVSFMSTCTIEEVASS 120
Query: 143 APGIRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLV 202
+RF Q+YVYK R++ Q+V+RAE AGFKAI LTVD PRLGRREADIKN+ P
Sbjct: 121 CNAVRFLQIYVYKRRDVTAQIVKRAEKAGFKAIVLTVDVPRLGRREADIKNKMISPQ--- 177
Query: 203 LKNFEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTR 262
LKNFE L ++ SG+ ++ +S D SLSW D++WL++IT LPILVKG++T ED
Sbjct: 178 LKNFEGLVSTEVRPNEGSGVEAFASSAFDASLSWKDIEWLRSITKLPILVKGLLTREDAL 237
Query: 263 LAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALA 322
AVE+G GI+VSNHGARQLDY PATI+ LEEVV KGR+PV LDGGVRRGTDVFKALA
Sbjct: 238 KAVEAGVDGIVVSNHGARQLDYSPATITVLEEVVHAVKGRIPVLLDGGVRRGTDVFKALA 297
Query: 323 LGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDSD 382
LGA V IGRP+++ LA GE GV+KV+ ML++E E+TMALSGC ++ ++TRNHV T+++
Sbjct: 298 LGAQAVLIGRPIVYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDVTRNHVRTENE 357
Query: 383 RIR 385
RI+
Sbjct: 358 RIK 360
>AT3G14150.1 | chr3:4690667-4692679 REVERSE LENGTH=364
Length = 363
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 270/363 (74%), Gaps = 3/363 (0%)
Query: 23 MELITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRIN 82
M+ I NV E+++LAKQ LPKM YD+Y GAEDQ TL EN +AF RI+FRPR+L+DVS+I+
Sbjct: 1 MDQIVNVDEFQELAKQALPKMYYDFYNGGAEDQHTLNENVQAFRRIMFRPRVLVDVSKID 60
Query: 83 MATNVLGFNISMPIMIAPSAMQKMAHPEGELXXXXXXXXXGTIMTLSSWSTSSVEEVNSA 142
M+T +LG+ IS PIMIAP+ K+AHPEGE TIM +S S+ + EE+ S+
Sbjct: 61 MSTKILGYPISAPIMIAPTGNHKLAHPEGETATAKAAAACNTIMIVSYMSSCTFEEIASS 120
Query: 143 APGIRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLV 202
+RF Q+YVYK R+I Q+V+RAE AGFKAI LTVD PRLGRREADIKN+ P
Sbjct: 121 CNAVRFLQIYVYKRRDITAQVVKRAEKAGFKAIVLTVDVPRLGRREADIKNKMISPQ--- 177
Query: 203 LKNFEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTR 262
LKNFE L ++ + SG+ ++ + D S SW D++WL++IT LPILVKG++T ED
Sbjct: 178 LKNFEGLFSTEVRPSKGSGVQAFASRAFDASFSWKDIEWLRSITELPILVKGILTREDAL 237
Query: 263 LAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALA 322
AVE+G GIIVSNHG RQLDY PATI+ LEEVV+ +GR+PV LDGGVRRGTDVFKALA
Sbjct: 238 KAVEAGVDGIIVSNHGGRQLDYSPATITVLEEVVQVVRGRIPVLLDGGVRRGTDVFKALA 297
Query: 323 LGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDSD 382
LGA V IGRP+++ LA GE GV+KV+ ML++E E+TMALSGC ++ +ITRNHV T+++
Sbjct: 298 LGAQAVLIGRPIIYGLAAKGEDGVKKVIDMLKNEFEITMALSGCPTIDDITRNHVRTENE 357
Query: 383 RIR 385
R+
Sbjct: 358 RLH 360
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,420,909
Number of extensions: 284690
Number of successful extensions: 680
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 677
Number of HSP's successfully gapped: 5
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)