BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0623100 Os04g0623100|AK067276
(456 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767 165 5e-41
AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591 128 8e-30
AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814 125 7e-29
AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462 120 1e-27
AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488 119 2e-27
AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690 117 9e-27
AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062 117 1e-26
AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679 117 2e-26
AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621 109 4e-24
AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387 98 1e-20
AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495 87 2e-17
AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387 73 3e-13
AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583 61 2e-09
AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917 57 2e-08
AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653 52 5e-07
>AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767
Length = 766
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 125/248 (50%), Gaps = 32/248 (12%)
Query: 122 KRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDD 181
K C +L +L K K FNAPV+V LGL DY+ +I+ PMDLGT+++ L Y S +
Sbjct: 423 KNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPRE 482
Query: 182 FAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKM-------YKASMSWFEQXXXXXXX 234
FA DVRLTF NA+ YNP G +VH A LL FE+ Y M +
Sbjct: 483 FAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPT 542
Query: 235 XXXXXXXXXXXATAPVQVK-------------------------PRAANVKMRKPKAREP 269
P+ V+ P ++KPKA EP
Sbjct: 543 PTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEP 602
Query: 270 NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWE 329
NKRDMT EEK L L++LP +K+ ++QIV KRN +L EIE+DID +D ET WE
Sbjct: 603 NKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWE 662
Query: 330 LDRFVNNF 337
LDRFV N+
Sbjct: 663 LDRFVTNY 670
>AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591
Length = 590
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/210 (38%), Positives = 98/210 (46%), Gaps = 39/210 (18%)
Query: 56 SYVALRPGAMAHREARALRDRLAGELGQVRALIARIDTW----QQGQ------------V 99
SY + R L+ R EL Q+R L RI++ QQG +
Sbjct: 66 SYATFNLAGYTSSQLRELKKRFTSELKQIRILRERIESGTFETQQGYTIPEVPAVRSAPL 125
Query: 100 KRHGSPRRDL---------------------PTPPA--KLRAAMRKRCEQILAKLRKDKR 136
+ DL P+ P KL A M C QIL KL K K
Sbjct: 126 NNFTGEKNDLGPKKKKQKKNVSGLKRSNQFGPSDPESEKLLAGMLNTCSQILVKLMKHKW 185
Query: 137 SIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRY 196
+ FN PV+V LGLHDYH V+K PMDLGTV+ NL G Y S DFA DVRLTF NA+ Y
Sbjct: 186 AWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFDNAMTY 245
Query: 197 NPAGHEVHTFAGDLLASFEKMYKASMSWFE 226
NP G +V+ A LL F+ M+ + FE
Sbjct: 246 NPKGQDVYFMADKLLDHFDGMFNPAFKKFE 275
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 98/170 (57%), Gaps = 23/170 (13%)
Query: 260 KMRKPKAREPNKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDI 319
K+ KPKA++PNKR MT+EEK+ L + L+ LP EK+ +LQI+RKRNG+ G EIELDI
Sbjct: 390 KLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDI 449
Query: 320 DEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVD 379
+ +D ET WELDRFV N+KK +K +R + N ++A+ ++M GS
Sbjct: 450 EAVDNETLWELDRFVTNYKKMASKIKRQGFI--RNVSTPPRNMASVAEM---GSAEKRTR 504
Query: 380 NGDVTMAIESKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEKDTEAA 429
GD +E VDIG+++P Y SVEIE+D A
Sbjct: 505 RGDAG------------------EEDVDIGEDIPIEDYPSVEIERDGTAV 536
>AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814
Length = 813
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 137/280 (48%), Gaps = 14/280 (5%)
Query: 94 WQQGQVKRHGSPRRDLPTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHD 153
W +G + S + + + P + K+C+ +L KL S F APV+V +L + D
Sbjct: 153 WNRGTSGKFESSKETMTSTP---NITLMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPD 209
Query: 154 YHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLAS 213
Y IK PMDLGTV+ NLA+G Y S +FAADVRLTF+NA+ YNP GH+VH GD+L+
Sbjct: 210 YLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPPGHDVHIM-GDILSK 268
Query: 214 -FEKMYKASMSWFEQXXXXXXXXXXXXXXXXXXATAPVQVKPRAANVKMRKP---KAREP 269
FE +K A V P A KM P EP
Sbjct: 269 LFEARWKTIKKKLPPCSMQTLPAVTLEPNDERKAAISV---PPAKKRKMASPVRESVPEP 325
Query: 270 NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGN-PELVGGEIELDIDEMDVETQW 328
K MT E++ L LESL +E +++ ++K N N E+ EIE+DID + E
Sbjct: 326 VKPLMTEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLV 385
Query: 329 ELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDM 368
L ++ + + NK + V ++I+ S ++S +
Sbjct: 386 TLRNLLDEYIQ--NKEAKQTNVEPCEIELINGSRPSNSSL 423
>AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462
Length = 461
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 93/175 (53%), Gaps = 29/175 (16%)
Query: 63 GAMAHREARALRDRLAGELGQVRALIARIDTWQQGQVKRHGSPRRDLPTPPAKLRAA--- 119
+++ E R L+ +L EL +VR+LI R++ QG P P KL+ A
Sbjct: 53 SSISKLEVRNLKRKLQAELEEVRSLIKRLEP--QGN--------NFAPVPNKKLKTANGG 102
Query: 120 ----------------MRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMD 163
+ K C +L KL K K FN PV+V LGLHDYH +IK PMD
Sbjct: 103 KKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMD 162
Query: 164 LGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMY 218
LGTV+ L+ Y S +FA DVRLTF+NA+ YNP GH+V+ A LL FE+ +
Sbjct: 163 LGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKW 217
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 272 RDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELV--GGEIELDIDEMDVETQWE 329
RD+T +EK L L+ LP +K+ V+QI++KR PEL EIELDID +D+ET WE
Sbjct: 306 RDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRT--PELSQQDDEIELDIDSLDLETLWE 363
Query: 330 LDRFVNNFKKALNKSRRAAIVNGE-NADVIDASVANDSDMLVNGSTATMV 378
L RFV +K++L+K + ++ E +A+ SV ++S+ LV G ++ V
Sbjct: 364 LFRFVTEYKESLSKKKEEQGLDSERDAESFHNSV-HESNTLVTGLESSKV 412
>AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488
Length = 487
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 88/166 (53%), Gaps = 14/166 (8%)
Query: 64 AMAHREARALRDRLAGELGQVRALIARIDTWQQ--GQVKRHGSPRRDLPTPPA------- 114
+++ E R L+ +L EL +VR+LI R D G + + G R
Sbjct: 62 SISKLEVRNLKRKLKSELDEVRSLIKRFDPEANPGGSMAKSGVVGRSKKVKTGNGGGKKS 121
Query: 115 -----KLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRA 169
K + K C +L KL K K + FN PV+ LGLHDYH ++K PMDLGTV+
Sbjct: 122 GHGADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKT 181
Query: 170 NLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFE 215
L Y S DFA DVRLTF+NA+ YNP GH+V+ FA LL FE
Sbjct: 182 KLGKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFE 227
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 270 NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELV--GGEIELDIDEMDVETQ 327
N RD+TLEEK L L+ LP +K+ V+QI++K NPEL EIELDID +D+ T
Sbjct: 326 NNRDLTLEEKRRLSEELQDLPYDKLETVVQIIKK--SNPELSQKDDEIELDIDSLDINTL 383
Query: 328 WELDRFVNNFKKALNKSRRAAIVNGE-NADVIDASVANDSDMLVNGSTATMV 378
WEL RFV +K++L+K A E +A+ + S+ + LV+G+T + V
Sbjct: 384 WELYRFVTGYKESLSKKNEAHGFGSERDAESVHNSI-QEPTTLVSGTTTSRV 434
>AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690
Length = 689
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 33/319 (10%)
Query: 110 PTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRA 169
PTP + K+CE +L +L + FN PV+V +L + DY VI+ PMDLGTV+
Sbjct: 127 PTPVTTAVMLLMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKN 186
Query: 170 NLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQXX 229
L +G Y +FAADVRLTFSNA+ YNP G++V+ A L FE +K ++
Sbjct: 187 KLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWK-TLEKKLSGT 245
Query: 230 XXXXXXXXXXXXXXXXATAPVQVKPRAANVKMRKPKAREPNKRDMTLEEKNLLRVGLESL 289
PV + + + +P KR MT E++ L LESL
Sbjct: 246 KVHTEPSNLDAHKEKHIVIPVPMAKKRKTTAVDCENVVDPAKRVMTDEDRLKLGKDLESL 305
Query: 290 PEEKMHNVLQIVRKRNGNPELVG-GEIELDIDEMDVETQWELDRFVNNFKKALNKSRRAA 348
E ++ +R N N +G EIE+DI+++ ++L ++ + + ++++++
Sbjct: 306 TEFPAQ-LINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLREI-QNKKSS 363
Query: 349 IVNGENADVIDASVANDSDML-VNGSTATMVDNGDVTMAIESKDPDKITTQAEQLDEYVD 407
+ E +++ SV +S M +GS E DE VD
Sbjct: 364 VEPCE-IELLHGSVPGNSSMQHCDGS--------------------------ELDDEVVD 396
Query: 408 IGD-EMPTATYQSVEIEKD 425
IG+ E PT++ V IEKD
Sbjct: 397 IGENEHPTSSISPVTIEKD 415
>AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062
Length = 1061
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 37/333 (11%)
Query: 98 QVKRHGSPRRDLPTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAV 157
Q + G R ++PT + A++ K CE +L +L K F PV+ L + DY V
Sbjct: 141 QRNKKGPSRLNVPT--SYTVASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNV 198
Query: 158 IKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKM 217
IK PMDLGT+R+ L G Y S DFAADVRLTFSN++ YNP G++ HT A + FE
Sbjct: 199 IKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESG 258
Query: 218 YKASMSWFEQXXXXXXXXXXXXXXXXXXATAPVQVKP-RAANVKMRKPKAR-EPNKRDMT 275
+K S ++ + P +V P R M K R EP K MT
Sbjct: 259 WK---SIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMT 315
Query: 276 LEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVG-GEIELDIDEMDVETQWELDRFV 334
EK L L +L E+ + ++R+++G+ G GEIE+DI+ + E + + + +
Sbjct: 316 DGEKKKLGQDLMALEEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLL 375
Query: 335 NNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDK 394
+++ + KS E ++ + + +DS ++ GD+
Sbjct: 376 DDYLREKKKSM-------EKSEPCEMEIVHDSGF---SNSPLQPSKGDL----------- 414
Query: 395 ITTQAEQLDEYVDI--GDEMPTATYQSVEIEKD 425
Q+DE VDI G++ +++ ++IEKD
Sbjct: 415 ------QIDEDVDIVGGNDPSVSSHPPLKIEKD 441
>AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679
Length = 678
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 99/212 (46%), Gaps = 42/212 (19%)
Query: 57 YVALRPGAMAHREARALRDRLAGELGQVRALIARID--TWQQGQVKR------------- 101
YV+ + R L+ RL EL +VR L RI+ T+ G V
Sbjct: 144 YVSFDLDGYTSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVYTTQARSFAGETNDV 203
Query: 102 -------------HGSPRRD--------------LPTPPAKLRAAMRKRCEQILAKLRKD 134
HG R + L K+ +M C QIL KL K
Sbjct: 204 GVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLMKH 263
Query: 135 KRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNAL 194
K S F PV+V LGLHDYH ++ PMDLGTV+ NL G Y S DFA+DVRLTF+NA+
Sbjct: 264 KWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNAM 323
Query: 195 RYNPAGHEVHTFAGDLLASFEKMYKASMSWFE 226
YNP G +V+ A LL+ F+ + ++ FE
Sbjct: 324 SYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFE 355
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 93/165 (56%), Gaps = 22/165 (13%)
Query: 260 KMRKPKAREPNKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDI 319
K+ KPKA++PNKR+MT++EK L V L+ LP EK+ ++QI+RKR + G EIELDI
Sbjct: 460 KLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDI 519
Query: 320 DEMDVETQWELDRFVNNFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVD 379
+ +D ET WELDRFV N++K +K +R + +N ++ ++M GS
Sbjct: 520 EALDNETLWELDRFVTNYRKMASKIKRQGFI--QNVSTPPRNMPPVTEM---GSAEKRGR 574
Query: 380 NGDVTMAIESKDPDKITTQAEQLDEYVDIGDEMPTATYQSVEIEK 424
G E +E VDIG+++P Y SVEIE+
Sbjct: 575 KG-----------------GEAGEEDVDIGEDIPVEDYPSVEIER 602
>AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621
Length = 620
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 148/326 (45%), Gaps = 47/326 (14%)
Query: 110 PTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRA 169
P P K+CE +L +L + FN PV+V +L + DY +IK PMDLGTV++
Sbjct: 119 PEPVTTSTMLRMKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKS 178
Query: 170 NLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQXX 229
L +G Y S +F+ADVRLTF NA+ YNP+ + V+ FA L FE +K E+
Sbjct: 179 KLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKT----IEKKS 234
Query: 230 XXXXXXXXXXXXXXXXATA---PVQVKPRAANVKMRKPKAREPNKRDMTLEEKNLLRVGL 286
A PV K R N +++ EP KR MT E++ L L
Sbjct: 235 SGTKSEPSNLATLAHKDIAIPEPV-AKKRKMNA-VKRNSLLEPAKRVMTDEDRVKLGRDL 292
Query: 287 ESLPEEKMHNVLQIVRKRNGNPELVG-GEIELDIDEMDVETQWELDRFVNNFKKALNKSR 345
SL E + ++ +R + E G EIE+DI+++ + ++L + F + K
Sbjct: 293 GSLTEFPVQ-IINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQKKD 351
Query: 346 RAAIVNGENADVIDASVANDSDMLVNGSTATMVDNGDVTMAIESKDPDKITTQ----AEQ 401
NGE V++ L++GS P TQ +E
Sbjct: 352 S----NGEPC-VLE---------LLHGSG-----------------PGNSLTQHCDGSEL 380
Query: 402 LDEYVDIGD-EMPTATYQSVEIEKDT 426
DE VDIG+ E P + +V EKD+
Sbjct: 381 EDEDVDIGNYEHPISHISTVRTEKDS 406
>AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387
Length = 386
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 139 W-FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYN 197
W F PV+V LGLHDY+ VI+ PMDLGT++ + + Y + + ADVRL F NA+RYN
Sbjct: 128 WPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYN 187
Query: 198 PAGHEVHTFAGDLLASFEKMYKASMSWF--EQXXXXXXXXXXXXXXXXXXATAPVQVKPR 255
+V+ A LL FE+ + M E+ A ++
Sbjct: 188 EEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARD 247
Query: 256 AAN----VKMRKPKAREP---NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNP 308
+N + ++ K RE R ++ +EK L L L E + L++V + NP
Sbjct: 248 LSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSE--SNP 305
Query: 309 ELVGG--EIELDIDEMDVETQWELDRFVNNFKKALNKS 344
G E+ELDID T W L FV KA NKS
Sbjct: 306 SFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKS 343
>AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495
Length = 494
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 100 KRHGSPRRDLPTPPAKLRAAMRKRCE---QILAKLR--KDKRSIW-FNAPVEVDRLGLHD 153
K+ G P+ P K R C+ Q LA LR + R W F PV+ ++ + D
Sbjct: 46 KKRGGPKELDEVQPKK---KQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPD 102
Query: 154 YHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLAS 213
Y VI+ PMDLGTV++ L Y + D+FAADVRLTF+NA+ YNP +EVHT A ++
Sbjct: 103 YFNVIQKPMDLGTVKSKLLKNVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEI 162
Query: 214 FEKMYKASM 222
FE +++ M
Sbjct: 163 FEVRWESLM 171
>AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387
Length = 386
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 136 RSIW-FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR---YPSHDDFAADVRLTFS 191
+ W F PV V+ LGLHDY VI PMD T++ + A Y AD+RL F
Sbjct: 126 KCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFE 185
Query: 192 NALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQXXXXXXXXXXXXXXXXXXATAPVQ 251
NA+ YN +V++ A LL FE+ + + ++ A
Sbjct: 186 NAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAKEASH 245
Query: 252 VKPR--------AANVKMRKPKAREPNK-RDMTLEEKNLLRVGLESLPEEKMHNVLQIVR 302
+K AN ++ K + + R +T+EEK + + L L + + VL IV
Sbjct: 246 IKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVA 305
Query: 303 KRNGNPELVGGEIELDIDEMDVETQWELDRFVNN 336
+ N + + E+ +++D +D T W L FV +
Sbjct: 306 QANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKD 339
>AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583
Length = 582
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 127 ILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG-RYPSHDDFAAD 185
++ K+ K + + FN PV + LG+ DY +IK PMD GT+ N G +Y + +D D
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKD 281
Query: 186 VRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQ 227
V ++N +YN G + + +F K + ++ + EQ
Sbjct: 282 VNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTSAGLYTEQ 323
>AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917
Length = 916
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 121 RKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHD 180
+K E IL KL+K + PV+ + L DYH +I+ PMD TVR LA G Y + +
Sbjct: 188 KKSLELILDKLQKKDIYGVYAEPVDPEELP--DYHDMIEHPMDFSTVRKKLANGSYSTLE 245
Query: 181 DFAADVRLTFSNALRYN 197
+ +DV L SNA++YN
Sbjct: 246 ELESDVLLICSNAMQYN 262
>AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653
Length = 652
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 103 GSPRRDLPTPPAKLRAAMRKRCEQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPM 162
GSP PT P +K IL +L+K ++ PV+ + L DY +IK PM
Sbjct: 163 GSPVESGPTTPL----PDKKLLLFILDRLQKKDTYGVYSDPVDPEELP--DYFEIIKNPM 216
Query: 163 DLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNPA 199
D T+R L +G Y + + F DV L +NA+ YN A
Sbjct: 217 DFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSA 253
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,891,294
Number of extensions: 358353
Number of successful extensions: 1096
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1091
Number of HSP's successfully gapped: 20
Length of query: 456
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 354
Effective length of database: 8,310,137
Effective search space: 2941788498
Effective search space used: 2941788498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)