BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0622700 Os04g0622700|Os04g0622700
(355 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767 158 4e-39
AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462 146 2e-35
AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814 121 7e-28
AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591 115 3e-26
AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679 111 7e-25
AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621 107 9e-24
AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062 107 1e-23
AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690 107 1e-23
AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488 107 1e-23
AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387 91 7e-19
AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495 84 8e-17
AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387 68 7e-12
AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583 58 7e-09
AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917 53 2e-07
AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653 48 7e-06
>AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767
Length = 766
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 128/248 (51%), Gaps = 32/248 (12%)
Query: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
K C +L +L K K FNAPV+V LGL DY+ +I+ PMDLGT+++ L Y S +
Sbjct: 423 KNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPRE 482
Query: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXXXX 122
FA D+RLTF NA+ YNP G +VH A LL FE+ + + + +E++ +
Sbjct: 483 FAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVIEADYNREMRFVTGYEMNLPT 542
Query: 123 XXXXXXXXXQVKPRAGNVK--------------------------------MRKTKAREP 150
+ P NV+ ++K KA EP
Sbjct: 543 PTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEP 602
Query: 151 NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWE 210
NKR+MT EEK L L++LP +K+ ++QIV KRN +L EIE+DID +D ET WE
Sbjct: 603 NKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWE 662
Query: 211 LDRFVNKF 218
LDRFV +
Sbjct: 663 LDRFVTNY 670
>AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462
Length = 461
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 147/295 (49%), Gaps = 41/295 (13%)
Query: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
K C+ +L KL K K FN PV+V LGL DYH +IK PMDLGTV+ L+ Y S +
Sbjct: 121 KSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLE 180
Query: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKM----------------------YK 100
FA D+RLTF+NA+ YNP GH+V+ A LL FE+ +
Sbjct: 181 FAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQYELLIRKQQPVRDIDFH 240
Query: 101 ASVSWFEQELKILEXXXXXXXXXXXXXXXXXQ-------------VKPRAGNVKMRKTKA 147
A VS ++ L + VKP V K
Sbjct: 241 APVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVE 300
Query: 148 REPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGG--EIELDIDEMDV 205
R++T +EK L L+ LP +K+ V+QI++KR PEL EIELDID +D+
Sbjct: 301 EASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRT--PELSQQDDEIELDIDSLDL 358
Query: 206 ETQWELDRFVNKFKKALNKSRRAAIVNGE-NADVIDASVANDSDMLVNGSTATMV 259
ET WEL RFV ++K++L+K + ++ E +A+ SV ++S+ LV G ++ V
Sbjct: 359 ETLWELFRFVTEYKESLSKKKEEQGLDSERDAESFHNSV-HESNTLVTGLESSKV 412
>AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814
Length = 813
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 133/254 (52%), Gaps = 11/254 (4%)
Query: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
+ K+CD +L KL S F APV+V +L + DY IK PMDLGTV+ NLA+G Y S
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXX 120
+FAAD+RLTF+NA+ YNP GH+VH GD+L+ K+++A +++L
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIM-GDILS---KLFEARWKTIKKKLPPCSMQTLPA 291
Query: 121 XXXXXXXXXXXQVK-PRAGNVKMR---KTKAREPNKREMTLEEKNLLRVGLESLPEEKMH 176
+ P A KM + EP K MT E++ L LESL +E
Sbjct: 292 VTLEPNDERKAAISVPPAKKRKMASPVRESVPEPVKPLMTEVERHRLGRQLESLLDELPA 351
Query: 177 NVLQIVRKRNGN-PELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNGEN 235
+++ ++K N N E+ EIE+DID + E L ++++ + NK + V
Sbjct: 352 HIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ--NKEAKQTNVEPCE 409
Query: 236 ADVIDASVANDSDM 249
++I+ S ++S +
Sbjct: 410 IELINGSRPSNSSL 423
>AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591
Length = 590
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
M C QIL KL K K + FN PV+V LGL DYH V+K PMDLGTV+ NL G Y S
Sbjct: 169 MLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSP 228
Query: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFE-QELKI 112
DFA D+RLTF NA+ YNP G +V+ A LL F+ M+ + FE Q+LK+
Sbjct: 229 IDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFDGMFNPAFKKFEAQQLKL 281
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 41/187 (21%)
Query: 141 KMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDI 200
K+ K KA++PNKR MT+EEK+ L + L+ LP EK+ +LQI+RKRNG+ G EIELDI
Sbjct: 390 KLPKPKAKDPNKRLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDI 449
Query: 201 DEMDVETQWELDRFVNKFKKALNKSRRAAIVNGENADVIDASVANDSDMLVNGSTATMVD 260
+ +D ET WELDRFV +KK +K +R + N ++A+ ++M GS
Sbjct: 450 EAVDNETLWELDRFVTNYKKMASKIKRQGFI--RNVSTPPRNMASVAEM---GSAEKRTR 504
Query: 261 NGDVTMAIESKDPDKITTQAEQLDEYVDAVADPEFLSWPWVRPCVDVGDEMPTATYQSVE 320
GD A + D VD+G+++P Y SVE
Sbjct: 505 RGD----------------AGEED--------------------VDIGEDIPIEDYPSVE 528
Query: 321 IEKDTEA 327
IE+D A
Sbjct: 529 IERDGTA 535
>AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679
Length = 678
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
M C QIL KL K K S F PV+V LGL DYH ++ PMDLGTV+ NL G Y S
Sbjct: 249 MMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSP 308
Query: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFE-QELKIL 113
DFA+D+RLTF+NA+ YNP G +V+ A LL+ F+ + ++ FE QE+K++
Sbjct: 309 IDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEVKVM 362
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 134 KPRAGNVKMRKTKAREPNKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVG 193
K R G K+ K KA++PNKREMT++EK L V L+ LP EK+ ++QI+RKR + G
Sbjct: 455 KGRKG--KLPKPKAKDPNKREMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDG 512
Query: 194 GEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIV 231
EIELDI+ +D ET WELDRFV ++K +K +R +
Sbjct: 513 DEIELDIEALDNETLWELDRFVTNYRKMASKIKRQGFI 550
>AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621
Length = 620
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
K+C+ +L +L + FN PV+V +L + DY +IK PMDLGTV++ L +G Y S +
Sbjct: 131 KQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSE 190
Query: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXXXX 122
F+AD+RLTF NA+ YNP+ + V+ FA L FE V W E K
Sbjct: 191 FSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFE------VRWKTIEKKSSGTKSEPSNL 244
Query: 123 XXXXXXXXXQVKPRAGNVKMRKTKAR---EPNKREMTLEEKNLLRVGLESLPEEKMHNVL 179
+P A KM K EP KR MT E++ L L SL E + ++
Sbjct: 245 ATLAHKDIAIPEPVAKKRKMNAVKRNSLLEPAKRVMTDEDRVKLGRDLGSLTEFPVQ-II 303
Query: 180 QIVRKRNGNPELVG-GEIELDIDEMDVETQWELDRFVNKF 218
+R + E G EIE+DI+++ + ++L ++F
Sbjct: 304 NFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEF 343
>AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062
Length = 1061
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 119/231 (51%), Gaps = 12/231 (5%)
Query: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
K C+ +L +L K F PV+ L + DY VIK PMDLGT+R+ L G Y S D
Sbjct: 163 KECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLD 222
Query: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXXXX 122
FAAD+RLTFSN++ YNP G++ HT A + FE +K+ E+++ + +
Sbjct: 223 FAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKS----IEKKIPMSKPPVIPLTS 278
Query: 123 XXXXXXXXX-QVKP-RAGNVKMRKTKAR-EPNKREMTLEEKNLLRVGLESLPEEKMHNVL 179
+V P R M K R EP K MT EK L L +L E+ +
Sbjct: 279 SASLESEIPFEVAPMRKKEAAMNDNKLRVEPAKLVMTDGEKKKLGQDLMALEEDFPQKIA 338
Query: 180 QIVRKRNGNPELVG-GEIELDI----DEMDVETQWELDRFVNKFKKALNKS 225
++R+++G+ G GEIE+DI DE+ + LD ++ + KK++ KS
Sbjct: 339 DLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKSMEKS 389
>AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690
Length = 689
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 17/256 (6%)
Query: 1 MRKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSH 60
+ K+C+ +L +L + FN PV+V +L + DY VI+ PMDLGTV+ L +G Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 61 DDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXX 120
+FAAD+RLTFSNA+ YNP G++V+ A L FE V W E K+
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFE------VRWKTLEKKLSGTKVHTE 250
Query: 121 XXXXXXXXXXXQVKPRAGNVKMRKTKA------REPNKREMTLEEKNLLRVGLESLPEEK 174
V P K RKT A +P KR MT E++ L LESL E
Sbjct: 251 PSNLDAHKEKHIVIP-VPMAKKRKTTAVDCENVVDPAKRVMTDEDRLKLGKDLESLTEFP 309
Query: 175 MHNVLQIVRKRNGNPELVG-GEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNG 233
++ +R N N +G EIE+DI+++ ++L +++ + + +++++++
Sbjct: 310 AQ-LINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLREI-QNKKSSVEPC 367
Query: 234 ENADVIDASVANDSDM 249
E +++ SV +S M
Sbjct: 368 E-IELLHGSVPGNSSM 382
>AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488
Length = 487
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 62/94 (65%)
Query: 3 KRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDD 62
K C+ +L KL K K + FN PV+ LGL DYH ++K PMDLGTV+ L Y S D
Sbjct: 134 KNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLD 193
Query: 63 FAADIRLTFSNALRYNPAGHEVHTFAGDLLASFE 96
FA D+RLTF+NA+ YNP GH+V+ FA LL FE
Sbjct: 194 FAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFE 227
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 151 NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGG--EIELDIDEMDVETQ 208
N R++TLEEK L L+ LP +K+ V+QI++K NPEL EIELDID +D+ T
Sbjct: 326 NNRDLTLEEKRRLSEELQDLPYDKLETVVQIIKK--SNPELSQKDDEIELDIDSLDINTL 383
Query: 209 WELDRFVNKFKKALNKSRRAAIVNGE-NADVIDASVANDSDMLVNGSTATMVDNGDVTMA 267
WEL RFV +K++L+K A E +A+ + S+ + ++ +T+ + ++G A
Sbjct: 384 WELYRFVTGYKESLSKKNEAHGFGSERDAESVHNSIQEPTTLVSGTTTSRVTESGK---A 440
Query: 268 IESKDP 273
I + P
Sbjct: 441 IRTSSP 446
>AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387
Length = 386
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 108/233 (46%), Gaps = 16/233 (6%)
Query: 7 QILAKLRKDKRSIW---FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDF 63
Q R+ + W F PV+V LGL DY+ VI+ PMDLGT++ + + Y + +
Sbjct: 113 QFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREI 172
Query: 64 AADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWF--EQELKILEXXXXXXX 121
AD+RL F NA+RYN +V+ A LL FE+ + + E++ ++ E
Sbjct: 173 YADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHAN 232
Query: 122 XXXXXXXXXXQVKPRAGN----VKMRKTKAREP---NKREMTLEEKNLLRVGLESLPEEK 174
++ N + ++ K RE R+++ +EK L L L E
Sbjct: 233 KQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPED 292
Query: 175 MHNVLQIVRKRNGNPELVGG--EIELDIDEMDVETQWELDRFVNKFKKALNKS 225
+ L++V + NP G E+ELDID T W L FV + KA NKS
Sbjct: 293 LSKALKMVSE--SNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKS 343
>AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495
Length = 494
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 5 CD---QILAKLR--KDKRSIW-FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYP 58
CD Q LA LR + R W F PV+ ++ + DY VI+ PMDLGTV++ L Y
Sbjct: 67 CDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYS 126
Query: 59 SHDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFE 96
+ D+FAAD+RLTF+NA+ YNP +EVHT A ++ FE
Sbjct: 127 NADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFE 164
>AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387
Length = 386
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAA---GRYPSHDDFA 64
I ++ + K + F PV V+ LGL DY VI PMD T++ + A Y
Sbjct: 118 IFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIY 177
Query: 65 ADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEXXXXXXXXXX 124
AD+RL F NA+ YN +V++ A LL FE+ + + ++E KI E
Sbjct: 178 ADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEA 237
Query: 125 XXXXXXXQVKP--RAGN----------VKMRKTKAREPNKREMTLEEKNLLRVGLESLPE 172
+K GN MRK R R++T+EEK + + L L
Sbjct: 238 LLAKEASHIKTTRELGNEICHANDELEKLMRKVVER---CRKITIEEKRNIGLALLKLSP 294
Query: 173 EKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
+ + VL IV + N + + E+ +++D +D T W L FV
Sbjct: 295 DDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFV 337
>AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583
Length = 582
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAG-RYPSHDDFAAD 66
++ K+ K + + FN PV + LG+ DY +IK PMD GT+ N G +Y + +D D
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKD 281
Query: 67 IRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQ 108
+ ++N +YN G + + +F K + ++ + EQ
Sbjct: 282 VNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTSAGLYTEQ 323
>AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917
Length = 916
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 2 RKRCDQILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHD 61
+K + IL KL+K + PV+ + L DYH +I+ PMD TVR LA G Y + +
Sbjct: 188 KKSLELILDKLQKKDIYGVYAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGSYSTLE 245
Query: 62 DFAADIRLTFSNALRYN 78
+ +D+ L SNA++YN
Sbjct: 246 ELESDVLLICSNAMQYN 262
>AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653
Length = 652
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADI 67
IL +L+K ++ PV+ + L DY +IK PMD T+R L +G Y + + F D+
Sbjct: 183 ILDRLQKKDTYGVYSDPVDPEEL--PDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDV 240
Query: 68 RLTFSNALRYNPA 80
L +NA+ YN A
Sbjct: 241 FLICTNAMEYNSA 253
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,747,812
Number of extensions: 269280
Number of successful extensions: 804
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 802
Number of HSP's successfully gapped: 20
Length of query: 355
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 255
Effective length of database: 8,364,969
Effective search space: 2133067095
Effective search space used: 2133067095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)