BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0620400 Os04g0620400|AK066330
(661 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30470.1 | chr1:10779423-10786415 FORWARD LENGTH=812 763 0.0
AT2G28360.1 | chr2:12124604-12129879 REVERSE LENGTH=789 661 0.0
AT3G45190.1 | chr3:16541994-16548161 REVERSE LENGTH=790 656 0.0
AT1G07990.1 | chr1:2477413-2482898 FORWARD LENGTH=803 654 0.0
>AT1G30470.1 | chr1:10779423-10786415 FORWARD LENGTH=812
Length = 811
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/598 (61%), Positives = 447/598 (74%), Gaps = 4/598 (0%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFW + G+S AS V+ I IIQECKALN RL+NFLR+KVQVEQL+
Sbjct: 1 MFWRMAGLSTASAVEAILDKDSFTLEDLLDEDEIIQECKALNGRLLNFLREKVQVEQLIR 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
YI+EE ED EKKR F+FPF+ACEIFTCE+++I+KTLVE+E+LM LLFS+L+ H +L
Sbjct: 61 YIIEEPLEDVEKKRTFKFPFIACEIFTCEIEMILKTLVEDEELMLLLFSFLEAKETHNSL 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYF KVVICL++RKT+PF+ +++ H EI+ QLVDLIGITSIMEVL RL+G DE +YS
Sbjct: 121 LAGYFSKVVICLLVRKTIPFMQFIKDHQEILKQLVDLIGITSIMEVLKRLVGTDEHLYSN 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
Y +MQW++D VLEMIVDKF SS+SPEVHANAAEILC + RYAPP LATK+SS S R
Sbjct: 181 YTSAMQWIEDTDVLEMIVDKFGSSESPEVHANAAEILCTVARYAPPGLATKLSSPSCTGR 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLASYQVFRSQLSHATLVTASPETVXXXX 300
L H EDSRPKSVLV+SLSVCISLLDPKR L +Y ++ QL+H ++VT +PETV
Sbjct: 241 LLKHTLEDSRPKSVLVNSLSVCISLLDPKRFTLGTYHIYGRQLTHGSMVT-NPETVEGML 299
Query: 301 XXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIHLG 360
AE VL TTYG LQPPLGK RLKIVEFISVLL++GSEAAE +I LG
Sbjct: 300 GSLGDLLMLLNVSSAEGVLLTTYGKLQPPLGKHRLKIVEFISVLLTVGSEAAEKEVIRLG 359
Query: 361 AIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNSAL 420
A+KRV+DLFFEYP+NNFLHHHVE++I SC++SK QL+ H+L EC L+ ILEAEK+S L
Sbjct: 360 AVKRVLDLFFEYPYNNFLHHHVENVILSCMESKNSQLVDHLLSECNLIGSILEAEKDSTL 419
Query: 421 SI---DLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHA 477
+ D + TVP EG+ RIG +GH+TRISNKL+QLA +N IQSHLQ+NS W +W
Sbjct: 420 TAGDSDKLQPTVPAEGKKPLRIGNIGHLTRISNKLLQLANSNVEIQSHLQENSKWVDWQT 479
Query: 478 GTLTRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSY 537
L++ N +ENVY WACGRPT+L VAALA+NLSQA +YGIYS
Sbjct: 480 DVLSKRNTLENVYSWACGRPTSLHDRSRDSDDDDYHDRDYDVAALANNLSQAFRYGIYSN 539
Query: 538 EDIDEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALN 595
+D+DE Q ERDDEDVYFDDESAEVVISSLRLGD+ +S+SLFTNSNWFAF +DKA N
Sbjct: 540 DDMDEAQGSMERDDEDVYFDDESAEVVISSLRLGDDQESDSLFTNSNWFAFDDDKAAN 597
>AT2G28360.1 | chr2:12124604-12129879 REVERSE LENGTH=789
Length = 788
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/600 (55%), Positives = 421/600 (70%), Gaps = 11/600 (1%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFW + +SA+SPV++I IIQECKALN+RLINFLR+K QVE+LL
Sbjct: 1 MFWKLASLSASSPVESILDKDSFTLEELLDEEEIIQECKALNSRLINFLREKTQVEKLLR 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
Y+VEE +DA+ KR F+FPF++CEIFTCE+DVI+KTLVE+E LMDLLF +L+P+RPH L
Sbjct: 61 YVVEEPEDDADSKRAFKFPFISCEIFTCEIDVILKTLVEDEKLMDLLFGFLEPNRPHSAL 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYF KVVICLM+RKT ++Y++GH + SQLVDLIGITSIMEVL+RL+GAD+ +Y
Sbjct: 121 LAGYFGKVVICLMIRKTSALMSYIKGHGNVFSQLVDLIGITSIMEVLVRLVGADDHVYPN 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
+ D M++L D +LEMIVDK + S PEV ANAAE LCAITR AP ALATK+SS FV+R
Sbjct: 181 FPDVMRYLADSDLLEMIVDKLNPSSPPEVQANAAETLCAITRNAPSALATKLSSPGFVSR 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLAS--YQVFRSQLSHATLVTASPETVXX 298
+F HA EDS KS LVHSL+VCISLLDP+R +S + +R Q + V + ET+
Sbjct: 241 IFGHAIEDSHSKSGLVHSLTVCISLLDPRRSGASSPFFNSYRGQNMFESPVPVTQETIGA 300
Query: 299 XXXXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIH 358
VLPTTYG L+PPLGK RLKIVEFI+VLL G+EAA L
Sbjct: 301 MLPKLGDMLVLLSVTSDSKVLPTTYGELRPPLGKHRLKIVEFIAVLLKSGNEAAGTELAI 360
Query: 359 LGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNS 418
G IKR+++LFFEYP+NN LHH VESII SCL++K + ++ H+L +C L+++IL ++K+S
Sbjct: 361 SGTIKRILELFFEYPYNNALHHQVESIILSCLENKSEIMVNHILQDCNLISKILSSDKDS 420
Query: 419 ALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAG 478
ALS D TV G+ PR+G VGH+TR+ NKL+QL+ +N++I++ LQ+NS W EW +
Sbjct: 421 ALSGD-NLPTVVATGKKPPRVGYVGHITRLWNKLVQLSDSNALIKTSLQENSEWNEWQSS 479
Query: 479 TLTRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYE 538
L N VENVY+WACGRPTTLQ VAALA+NL+QA Y IY E
Sbjct: 480 VLKERNTVENVYRWACGRPTTLQ---DRTRDSDEEDRDYDVAALANNLNQAFNYRIYGNE 536
Query: 539 DIDEDQ---VPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDKALN 595
D +EDQ +RDD D YFDDESAEVVISSLRLGD D SL TNS+WF F +D+ N
Sbjct: 537 DNEEDQNALNALDRDDSDSYFDDESAEVVISSLRLGD--DQGSLLTNSDWFTFQDDRFSN 594
>AT3G45190.1 | chr3:16541994-16548161 REVERSE LENGTH=790
Length = 789
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/594 (55%), Positives = 419/594 (70%), Gaps = 5/594 (0%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFW + +SAASPV++I IIQEC+ALN+RLINFLR++ QVEQLL
Sbjct: 1 MFWKLTALSAASPVESILDKEDFTLEELLDEEDIIQECRALNSRLINFLRERAQVEQLLR 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
+IVEE+PEDA+ KR F+FPF++ E+ TCE+DVI+KTLV+ E+LM+LLFS+L+P+R H +
Sbjct: 61 FIVEESPEDADSKRAFKFPFISSEVLTCEIDVILKTLVDEEELMNLLFSFLEPNRSHSVM 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYF KVVICLMLRKT+P +NYV+ H + QLVDLIGITSIMEVLIRL+GAD+ +Y
Sbjct: 121 LAGYFSKVVICLMLRKTVPLMNYVKAHQNVFQQLVDLIGITSIMEVLIRLVGADDHVYPN 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
++D MQWL D +LEMIVDK S S+S EVHANAAE LC I + AP LATK+SS+SFVAR
Sbjct: 181 HLDVMQWLADSNLLEMIVDKLSPSNSLEVHANAAETLCTIAQNAPSPLATKLSSSSFVAR 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLAS--YQVFRSQLSHATLVTASPETVXX 298
+F HAFED + KS LVH+LSVCISLL P+R V++S FR Q + ++ +PET+
Sbjct: 241 IFGHAFEDPQSKSSLVHTLSVCISLLSPRRSVVSSPFMYSFRGQQIFESPISVNPETIAT 300
Query: 299 XXXXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIH 358
E +LPTTYG L+PPLG RLKIVEFI+VLL SEA L
Sbjct: 301 MLPRLGDFVALLNVTSDEKILPTTYGQLRPPLGSHRLKIVEFIAVLLKTRSEATGKELAS 360
Query: 359 LGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNS 418
GAI+RV+DLFFEYP+NN LHH VESII SCL+SK D+++ H+L EC L+ +I++ EK
Sbjct: 361 SGAIRRVLDLFFEYPYNNALHHQVESIILSCLESKNDEIVDHLLRECDLIGKIIKTEKQP 420
Query: 419 ALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAG 478
LS D + T+ G+ PR+G VGH++RISNKL+QL+ ++ I++ L++N+ W EW A
Sbjct: 421 ILSGD-KQPTLAAAGKQAPRVGNVGHISRISNKLVQLSTNSNQIKTLLEENNDWGEWEAN 479
Query: 479 TLTRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYE 538
TL NAVENVY+W CGRPT L +A LA+NL+Q +Y +
Sbjct: 480 TLHDRNAVENVYRWVCGRPTALHDRTRDSDDDEVHDRDYDLAGLANNLNQF-RYNMQENN 538
Query: 539 DIDEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDK 592
E+ ++RD+EDVYFDDESAEVVISSLRLGDE +N+LFTNSNWF F D+
Sbjct: 539 GAGEEHGSNDRDEEDVYFDDESAEVVISSLRLGDEQ-ANNLFTNSNWFTFQGDE 591
>AT1G07990.1 | chr1:2477413-2482898 FORWARD LENGTH=803
Length = 802
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/594 (56%), Positives = 419/594 (70%), Gaps = 8/594 (1%)
Query: 1 MFWHVPGISAASPVDTIXXXXXXXXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLH 60
MFW + +SA+SPV+ I IIQECKALN+RLINFLRDK QVEQLL
Sbjct: 1 MFWKLTSLSASSPVEIILDKENFTLEELLDEEEIIQECKALNSRLINFLRDKAQVEQLLR 60
Query: 61 YIVEEAPEDAEKKRIFRFPFVACEIFTCEVDVIMKTLVENEDLMDLLFSYLKPDRPHGTL 120
YIVEE P+DA+ KR F+FPF++CEIFTCE+DVI+KTLVE+E+LM+LLFS+L+P+RPH L
Sbjct: 61 YIVEEPPQDADSKRAFKFPFISCEIFTCEIDVILKTLVEDEELMNLLFSFLEPNRPHSAL 120
Query: 121 LAGYFCKVVICLMLRKTLPFVNYVQGHPEIVSQLVDLIGITSIMEVLIRLIGADETMYSG 180
LAGYF KVVICLM+RKT +NYV+GH + QLVDLIGITSIMEVL+RL+GAD+ +Y
Sbjct: 121 LAGYFSKVVICLMIRKTAALMNYVKGHQNVFCQLVDLIGITSIMEVLVRLVGADDQVYPN 180
Query: 181 YVDSMQWLDDIKVLEMIVDKFSSSDSPEVHANAAEILCAITRYAPPALATKISSASFVAR 240
++D MQWL D +LEMIVDK S PEV ANAAE LCAI+R AP ALAT++SS +VA+
Sbjct: 181 FLDVMQWLADSNLLEMIVDKLKPSSPPEVQANAAETLCAISRNAPSALATQLSSPGYVAK 240
Query: 241 LFHHAFEDSRPKSVLVHSLSVCISLLDPKRLVLAS--YQVFRSQLSHATLVTASPETVXX 298
+F HA EDS KS LVHSLSVC SLLDP+R ++S + +R Q + V SPET+
Sbjct: 241 IFGHALEDSHSKSGLVHSLSVCTSLLDPRRSAVSSSMFNSYRGQHMFESPVPVSPETIGA 300
Query: 299 XXXXXXXXXXXXXXXXAENVLPTTYGVLQPPLGKQRLKIVEFISVLLSIGSEAAEIRLIH 358
VLPTTYG L+PPLGK RLKIVEFI+VLL SEAA+ L+
Sbjct: 301 MLPKLNDLLMLLTVASDSTVLPTTYGELRPPLGKHRLKIVEFIAVLLKTRSEAAQKELVS 360
Query: 359 LGAIKRVIDLFFEYPFNNFLHHHVESIISSCLDSKQDQLICHVLDECKLVTRILEAEKNS 418
G IKR +DLFFEYP+NN LHH VESII SCL++K D ++ H+L +C L+ + L ++++S
Sbjct: 361 SGTIKRTLDLFFEYPYNNALHHQVESIILSCLENKSDLMVNHILRDCDLIGKFLLSDRDS 420
Query: 419 ALSIDLTKHTVPLEGRFTPRIGLVGHMTRISNKLIQLAKTNSIIQSHLQQNSGWAEWHAG 478
L D ++ TV G+ PR+G VGH+TRISNK+ QL+ +N I+++LQ+NS W EW
Sbjct: 421 NLLGD-SQPTVAASGKKKPRVGYVGHITRISNKIGQLSNSNGQIKAYLQENSEWNEWQGS 479
Query: 479 TLTRCNAVENVYQWACGRPTTLQXXXXXXXXXXXXXXXXXVAALASNLSQASKYGIYSYE 538
L N VENV +W CGRPTTLQ VAALA+NLSQA +Y IY +
Sbjct: 480 VLQDRNTVENVNRWGCGRPTTLQ---DRTRDSDEEDRDYDVAALANNLSQAFRYKIYGND 536
Query: 539 DIDEDQVPHERDDEDVYFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGEDK 592
D +ED +RDD+DVYFDDESAEVVISSLRLGD D SLFTNSNWF F +D+
Sbjct: 537 DNEEDHNALDRDDDDVYFDDESAEVVISSLRLGD--DQGSLFTNSNWFTFQDDR 588
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,603,806
Number of extensions: 486529
Number of successful extensions: 1440
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1420
Number of HSP's successfully gapped: 4
Length of query: 661
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 556
Effective length of database: 8,227,889
Effective search space: 4574706284
Effective search space used: 4574706284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)