BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0619700 Os04g0619700|AK111585
(562 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G21040.1 | chr5:7145058-7146677 REVERSE LENGTH=540 552 e-157
AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188 59 9e-09
AT5G50120.1 | chr5:20382630-20383796 REVERSE LENGTH=389 58 1e-08
AT1G47610.1 | chr1:17504836-17505891 FORWARD LENGTH=352 54 3e-07
AT5G10940.1 | chr5:3448890-3454127 REVERSE LENGTH=758 53 3e-07
AT1G24130.1 | chr1:8534183-8535430 REVERSE LENGTH=416 53 4e-07
AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510 53 4e-07
AT1G24530.1 | chr1:8693287-8694543 FORWARD LENGTH=419 52 6e-07
AT4G25440.1 | chr4:13007107-13009381 REVERSE LENGTH=431 52 1e-06
AT1G18080.1 | chr1:6222325-6223901 FORWARD LENGTH=328 52 1e-06
AT5G45360.1 | chr5:18384783-18386670 REVERSE LENGTH=317 50 4e-06
AT1G49450.1 | chr1:18305684-18307099 FORWARD LENGTH=472 50 4e-06
>AT5G21040.1 | chr5:7145058-7146677 REVERSE LENGTH=540
Length = 539
Score = 552 bits (1422), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 355/481 (73%), Gaps = 11/481 (2%)
Query: 82 DLPSALVCEVLEHLDPKELGIVSCVSTLLHTLATDHQGWKKFYCERWGIPTPPVTLNGPL 141
DLP AL+ E+L LDPKELG+VSCVST LH LA++H WK+FY ERWG+P V
Sbjct: 70 DLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFYRERWGLP---VVFGA-- 124
Query: 142 VPGGTSDWKSWKTLFVEREFRSKSFMGRFSVDVLRDHSEDVRTVFLLASVNLIFTGGNDS 201
G SD +SWK LFVEREFRS++F+GR+S+D L H+E VRTVFLLAS L+FT G DS
Sbjct: 125 ASSGLSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDS 184
Query: 202 VIRMWDLEEGLLIDKSRPLCCTIRAIAADTRLLVTAGTNAFIHCWRAVEGNSYPFHISGN 261
++RMWD+EEGL I S+PL CTIRA+AADT+LLV GT+ FIHCW++++G F ++G
Sbjct: 185 IVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFIHCWKSLDGLRNLFDLTGF 244
Query: 262 GTDQSPEFRLWGHEGPVTCLALDSLRIFSGSWDMTVRVWDRSEMKCVQKFMHADWVWSVA 321
+++ EFRLWGHEGP+T LALD IFSGSWDM+VR+WDRS MKCV+ H+DWVW +A
Sbjct: 245 QKEKT-EFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDWVWGLA 303
Query: 322 PHGNTVASTAGRDAYVWDIRSGELENVISNAHYGNAFSLARTHLADVLFTGGEDGAIRLF 381
PH T+AST+G D Y+WD+ S +I +AH G +SLAR+H D LFTGGEDG I++F
Sbjct: 304 PHETTLASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMF 363
Query: 382 NVSEVSDDEDIKPAATWVPHTGPVHSLAFEYPWLVSASSDGRVALIDLRKLLTPRKSSKQ 441
+ + + + W+PHT PV+SL+FE+PWLVSAS DG++ALID+RKLL + +
Sbjct: 364 EIRRYGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALIDVRKLLKTNRCAYS 423
Query: 442 PFRVKNFDPSSIEPPQRMLHGFGCDLFSVAIGADRIVCGGEDGAVKVWNFSEALEIEKRA 501
K S++EPPQRMLHGFG +LFSV +G DRIVCGGE+G V++WNF++ALEIE+R
Sbjct: 424 ----KRISSSTVEPPQRMLHGFGSNLFSVDVGYDRIVCGGEEGTVRIWNFTQALEIERRT 479
Query: 502 QALRSMRQENRMRRKKAQVEMNANGRRSDQCGSIAMKRNQLKGDKSVTWHSKRAINDKVK 561
+AL+ MR ENRMRR++ Q+EMNA R DQC SIA +N + G+++ WHSKR + K K
Sbjct: 480 RALKGMRHENRMRRRRMQMEMNAKNGRPDQC-SIAAHKNPINGERNRAWHSKRRASGKAK 538
Query: 562 S 562
+
Sbjct: 539 A 539
>AT1G49040.1 | chr1:18139419-18148826 REVERSE LENGTH=1188
Length = 1187
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 36/241 (14%)
Query: 193 LIFTGGNDSVIRMWD--LEEGLLIDKSRPLCCTIRAIAADTRLLVTAGTNAFIHCWRAVE 250
+G D ++++WD L L + T+RAI++D +V+ + + W
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVW---- 924
Query: 251 GNSYPFHISGNGTDQSPEFRLWGHEGPVTCL-ALDSLRIFSGSWDMTVRVWD-RSEMKCV 308
T Q E L GH+ V+C+ L R+ + + D TV++WD R++M
Sbjct: 925 ---------DKQTTQLLE-ELKGHDSQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVA 974
Query: 309 QKFMHADWVWSVAPHGNT-VASTAGRD--AYVWDIRSG-ELENVISNAHYGNAFSLARTH 364
+ + S+ +T + + AGRD A +WDIRSG ++ + + + + +
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRM---- 1030
Query: 365 LADVLFTGGEDGAIRLFNVSEVSDDEDIKPAATWVPHTGPVHSLAFEYPW---LVSASSD 421
+ D L TG +D R+++VS S D A H GPV S+ + P+ +++ S+D
Sbjct: 1031 VEDTLITGSDDWTARVWSVSRGSCD------AVLACHAGPVQSVEYS-PFDKGIITGSAD 1083
Query: 422 G 422
G
Sbjct: 1084 G 1084
>AT5G50120.1 | chr5:20382630-20383796 REVERSE LENGTH=389
Length = 388
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 138/349 (39%), Gaps = 66/349 (18%)
Query: 194 IFTGGNDSVIRMWD---LE-------EGLLIDKSRPLCCTIRAIAADTRLLVTAGTNAFI 243
++TG ND V+R+W+ LE G +I R ++++ L TA + I
Sbjct: 51 LYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQDHKI 110
Query: 244 HCWRA-------VEGNSYPFHISGNGT-----------DQSPEFRL-----WGHE-GPVT 279
W+ V G Y H++ T E R W H V+
Sbjct: 111 RVWKINDVVEEDVGGKKY-MHLATMPTISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVS 169
Query: 280 CLAL--DSLRIFSGSWDMTVRVWDRSEMKCVQKFM--HADWVWSVA--PHGNTVASTAGR 333
LAL D ++S SWD T+++W ++ KC++ F H D + +VA +G+ ++ +
Sbjct: 170 GLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQ 229
Query: 334 DAYVW----------DIRSGELENVISNAHYG-NAFSLARTHLADVLFTGGEDGAIRLFN 382
VW R L ++S + G NA +L+ T+ +L +GG DG+I ++
Sbjct: 230 RIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTN-GSLLHSGGSDGSILVW- 287
Query: 383 VSEVSDDEDIKPAATWVPHTGPVHSLAFEYPWLVSASSDGRVALIDLRKLLTPRKSSKQP 442
E D DI HT V LA L S S+D V L K S +
Sbjct: 288 --ERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLW---------KCSAKD 336
Query: 443 FRVKNFDPSSIEPPQRMLHGFGCDLFSVAIGADRIVCGGEDGAVKVWNF 491
+ + P + + F D + I GG D VKVW
Sbjct: 337 YSCLAMLEGHLGPVKCLTGAFR-DSRKADEASYHIYSGGLDSQVKVWQV 384
>AT1G47610.1 | chr1:17504836-17505891 FORWARD LENGTH=352
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 36/271 (13%)
Query: 185 VFLLASVN-LIFTGGNDSVIRMW-DLEEGLLIDKSRPLCCTIRAIAADTRLLVTAGTNAF 242
++ LA+ N L++TG +++ IR+W +L E + L I I+ + ++ T +
Sbjct: 27 IYSLAATNDLLYTGSDNNYIRVWKNLNEFSGFKSNSGLVKAI-VISREAKVF-TGHQDGK 84
Query: 243 IHCWRAVEGNSYPFHISGN--------GTDQSP----EFR-----LW-GHEGPVTCLAL- 283
I W+ N + +G+ + P E R LW H V+CL+L
Sbjct: 85 IRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCLSLA 144
Query: 284 -DSLRIFSGSWDMTVRVWDRSEMKCVQKF-MHADWVWSVAPHGNTV-ASTAGRDAYVW-- 338
D ++S SWD TV+VW ++KC++ H D V SV + V +A VW
Sbjct: 145 EDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTGSADGTVKVWKR 204
Query: 339 DIRSGELENVISNA---HYGNAFSLARTHLADVLFTGGEDGAIRLFNVSEVSDDEDIKPA 395
+IR + + +L +H+A +++G DGA+ N E+ D + +K
Sbjct: 205 EIRGKRTAHSLFQTLLKQESAVTALVTSHMA--VYSGSSDGAV---NFWEMGDKKLLKHC 259
Query: 396 ATWVPHTGPVHSLAFEYPWLVSASSDGRVAL 426
+ H V +A L S ++D ++ +
Sbjct: 260 EVFKKHRLAVLCIAAAGKLLFSGAADKKICV 290
>AT5G10940.1 | chr5:3448890-3454127 REVERSE LENGTH=758
Length = 757
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 98/244 (40%), Gaps = 59/244 (24%)
Query: 266 SPEFRLWGHEGPVTCLALDS--LRIFSGSWDMTVRVWDRSEMKCVQKFMHADWVWSVAPH 323
S E L GH+G V LA +S + SGS D+ + +W+ S +K +H+
Sbjct: 41 SQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSS----RKLLHS--------- 87
Query: 324 GNTVASTAGRDAYVWDIRSGELENVISNAHYGNAF--SLARTHLADVLFTGGEDGAIRLF 381
I H N F +++ +G D +RLF
Sbjct: 88 -------------------------IDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLF 122
Query: 382 NVSEVS----DDEDIKPAATWVPHTGPVHSLAFE--YPWLV-SASSDGRVALIDLRKLLT 434
N S +S DD I P+A + HT V LA E P +V SAS DG + D R+ +
Sbjct: 123 NTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRESTS 182
Query: 435 --PRKSSKQPFRVKNFDPSS------IEPPQRMLHGFGCDLFSVAIGADRIVCGGEDGAV 486
P ++ Q R D S +PP++ L CD+ A ++ GG D
Sbjct: 183 CPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKSCDI--SATRPHLLLVGGSDAFA 240
Query: 487 KVWN 490
++++
Sbjct: 241 RLYD 244
>AT1G24130.1 | chr1:8534183-8535430 REVERSE LENGTH=416
Length = 415
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 172 VDVLRDHSEDVRTVFLLASVNLIFTGGNDSVIRMWDLEEGLLIDKSRPLCCTIR------ 225
+D + +D +++ ++TG D I++W+ + DK L T+
Sbjct: 227 LDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKK-----DKKHSLVATLTKHLSAV 281
Query: 226 ---AIAADTRLLVTAGTNAFIHCW-RAVEGNSYPFHISGNGTDQSPEFRLWGHEGPVTCL 281
AI+ D ++L + + I W R + G+ H+S G L GH + CL
Sbjct: 282 NALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGA-------LRGHRKAIMCL 334
Query: 282 ALDSLRIFSGSWDMTVRVWDRSEMK 306
A+ S + SGS D ++RVW R M+
Sbjct: 335 AVASDLVLSGSADKSLRVWRRGLME 359
>AT5G50230.1 | chr5:20448632-20450855 REVERSE LENGTH=510
Length = 509
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 45/234 (19%)
Query: 194 IFTGGNDSVIRMWDLEEGLLIDKSRPLCCTI--RAIAADTRLLVTAGTNAFIHCWRAVEG 251
+FTGG D ++MWD G LI I A+ D + ++ A ++ + W G
Sbjct: 240 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG 299
Query: 252 ----------------NSYPF---HISGNGTDQSPEFRLWG-HEGPVT------------ 279
+ F H+ D++ +LW H+G T
Sbjct: 300 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRT--IKLWDLHKGYCTNTVLFTSNCNAI 357
Query: 280 CLALDSLRIFSGSWDMTVRVWDRSEMKCVQKFM-HADWVWSV--APHGNTVASTAGRDAY 336
CL++D L +FSG D +R+WD K + + H+ V SV + +GN + T+GRD
Sbjct: 358 CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRIL-TSGRDNV 416
Query: 337 --VWDIRSGELENVISNAHYGNAFSLARTHLA---DVLFTGGEDGAIRLFNVSE 385
V+D R+ E+ + + A + +R+ ++ D + G DG++ ++++S+
Sbjct: 417 HNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSK 470
>AT1G24530.1 | chr1:8693287-8694543 FORWARD LENGTH=419
Length = 418
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 50/303 (16%)
Query: 219 PLCCTIRAIAADTRLLVTAGTNAFIHCWRAVEGNSYP--------------FHISGNGTD 264
P T++++ + TA + I W+ + Y F + N
Sbjct: 123 PFSGTVKSVGFSGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQ 182
Query: 265 -QSPEFRLW-GHEGPVTCLALDSLRIFSGSWDMTVRVWDRSEMKCVQKF-MHADWVWSVA 321
+ + RLW H VT LA+ I+S SWD T+++W S+++C + H D V ++A
Sbjct: 183 VRRHKKRLWIEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIA 242
Query: 322 --PHGNTVASTAGRDAYVWDIRSGELENVIS---NAHYGNAFSLARTHLADVLFTGGEDG 376
+G +A R VW +GE + + H +LA VLF+G D
Sbjct: 243 VSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDR 302
Query: 377 AIRLFNVSEVSDDEDIKPAATWVPHTGPVHSLAFEYPWLVSASSDGRVALIDLRKLLTPR 436
+I ++ + S+ ++ A H + SL L+S S+D V
Sbjct: 303 SILVWEREDTSNYMAVRGALR--GHDKAILSLFNVSDLLLSGSADRTV------------ 348
Query: 437 KSSKQPFRVKNFDPSSIEPPQRMLHGFGCDLFSVAIGADR-------IVCGGEDGAVKVW 489
R+ P S +L G + S+A ++ I+ G DG VK W
Sbjct: 349 -------RIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCW 401
Query: 490 NFS 492
S
Sbjct: 402 KVS 404
>AT4G25440.1 | chr4:13007107-13009381 REVERSE LENGTH=431
Length = 430
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 242 FIHCWRAVEGNSYPFHISGNGTDQSPEFRLWGHEGPVTCLALDSL--RIFSGSWDMTVRV 299
++HCW +G+S+ +L GH+ VT +AL S ++++ S D TVR+
Sbjct: 124 YLHCWS--KGDSFSLLT-----------QLDGHQKVVTGIALPSGSDKLYTASKDETVRI 170
Query: 300 WDRSEMKCVQKFMHADWVWSVAPHGNTVASTAGRDAYVWDIRSGELENVISNAHYGNAFS 359
WD + +C V + G + W+I++ ++ N G +S
Sbjct: 171 WDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNN--ADLSLNGPVGQVYS 228
Query: 360 LARTHLADVLFTGGEDGAIRLFNVSEVSDDEDIKPAATWVPHTGPVHSLAFEYPWLVSAS 419
L D+LF G +DG+I ++ + + D PAA+ + HT V SL L S +
Sbjct: 229 LVVG--TDLLFAGTQDGSILVWRYNSTTSCFD--PAASLLGHTLAVVSLYVGANRLYSGA 284
Query: 420 SDGRVALIDLRKL 432
D + + L L
Sbjct: 285 MDNSIKVWSLDNL 297
>AT1G18080.1 | chr1:6222325-6223901 FORWARD LENGTH=328
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 175 LRDHSEDVRTVFLLASVNLIFTGGNDSVIRMWDLEEGL----LIDKSRPLCCTIRAIAAD 230
L HS V V L + +G D +R+WDL G+ + ++ + A + D
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSV--AFSLD 116
Query: 231 TRLLVTAGTNAFIHCWRAVEGNSYPFHISGNGTDQSPEFRLWGHEGPVTCLAL--DSLR- 287
R +V+A + I W + Y G G H V+C+ ++L+
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEG-----------HRDWVSCVRFSPNTLQP 165
Query: 288 -IFSGSWDMTVRVWDRSEMKCVQKFM-HADWVWSVA--PHGNTVASTAGRDAYV--WDIR 341
I S SWD TV+VW+ S K H +V +VA P G+ AS G+D V WD+
Sbjct: 166 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS-GGKDGVVLLWDLA 224
Query: 342 SGE 344
G+
Sbjct: 225 EGK 227
>AT5G45360.1 | chr5:18384783-18386670 REVERSE LENGTH=317
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 59 DPKKNVETSDGETASKCDSWCFTDLPSALVCEVLEHLDPKELGIVSCVSTLLHTLATDHQ 118
D K+N D A + +S FT++P+ L +L+ L ++L S V L+ A D
Sbjct: 51 DQKEN-GNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADES 109
Query: 119 GWKKFYCERWGIPTPPVTLNGPLVPGGTSDWKSWKTLFVERE 160
W++ YC RWG+ P L +WK L+++R+
Sbjct: 110 LWRRLYCIRWGLTLPSRKLRES----------AWKKLYIDRD 141
>AT1G49450.1 | chr1:18305684-18307099 FORWARD LENGTH=472
Length = 471
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 107/263 (40%), Gaps = 43/263 (16%)
Query: 187 LLASVNLIFTGGNDSVIRMW-DLEEGLLIDKSRPLCCTIRAIAADTRLLVTAGTNAFIHC 245
L AS +L+FTG + IR+W DL++ + I + D R+ T + I
Sbjct: 140 LAASGDLLFTGSDSKNIRVWKDLKDFSGFKSTSGFVKAI-VVTRDNRVF-TGHQDGKIRV 197
Query: 246 WRAVEGNSYPFHISGN------------GTDQSPEFRLWG------HEGPVTCLAL--DS 285
WR + N + G+ E R H V+CL+L D
Sbjct: 198 WRGSKKNPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSLNEDL 257
Query: 286 LRIFSGSWDMTVRVWDRSEMKCVQKF-MHADWVWSVAPHGNTVASTAGRDAY--VW--DI 340
++SGSWD T++VW S+ KC++ H D V +V + + T D VW ++
Sbjct: 258 GLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFTGSADGTLKVWKREV 317
Query: 341 RSGELENVISNA--HYGNAFSLARTHLAD-VLFTGGEDGAIRLFNVSEVSDDEDIKPAAT 397
+ E+++V+ NA + +L D V++ G DG + + +
Sbjct: 318 QGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQK------------ 365
Query: 398 WVPHTGPVHSLAFEYPWLVSASS 420
++ H G +H L +A S
Sbjct: 366 YLTHKGTIHGHRMAVLCLATAGS 388
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,518,901
Number of extensions: 597629
Number of successful extensions: 2545
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 2553
Number of HSP's successfully gapped: 24
Length of query: 562
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 458
Effective length of database: 8,255,305
Effective search space: 3780929690
Effective search space used: 3780929690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)