BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0579700 Os04g0579700|AK065545
(533 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549 625 e-179
AT5G60050.1 | chr5:24183680-24185264 REVERSE LENGTH=500 386 e-107
AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521 333 1e-91
AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545 215 5e-56
AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442 58 1e-08
AT3G19920.1 | chr3:6929840-6931771 REVERSE LENGTH=417 54 3e-07
AT4G10800.1 | chr4:6643678-6644529 FORWARD LENGTH=284 51 1e-06
>AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549
Length = 548
Score = 625 bits (1612), Expect = e-179, Method: Compositional matrix adjust.
Identities = 321/539 (59%), Positives = 379/539 (70%), Gaps = 40/539 (7%)
Query: 17 KFNSALNAG--XXXXXXXXXXXXDKTRSSPTLFDMMANEQDYHPRTAAAIHS-------- 66
KFNSAL AG DKTRSSPTLF+MMA+E D + IH+
Sbjct: 28 KFNSALTAGLLNPMSPPPPPAMHDKTRSSPTLFEMMASEADTIGKVPVQIHNGVLPSPSS 87
Query: 67 --------IXXXXXXXXXXXXXRSMDRQVLLQDRVAELIGSCSPGNQFNDADSSDVRLTL 118
+ D+Q L R+++L+ SPGNQFND +SSDV+LTL
Sbjct: 88 SSSSSSAAATAARTTNVNHLVISAQDKQALAMQRISDLLVIRSPGNQFNDPNSSDVKLTL 147
Query: 119 TSKDGLSVTLCVHRHILVAHSRFFAAKLSDRWSKQQ---RTLPHIVEISDCDDVEVYVET 175
+SKDG+S+T+CVHR ILVAHSRFFA KLSDRWSKQQ + P+IVEISDCDDVEVY+ET
Sbjct: 148 SSKDGISITMCVHRQILVAHSRFFAMKLSDRWSKQQLPPSSSPYIVEISDCDDVEVYIET 207
Query: 176 LRLMYCKDLRRRLMREDVSKVLGILKVSAAIVFDAGVLSCLEYLEAAPWAEDDDEKVAAL 235
L LMYC+DLR+++MR DVS+VLGILKVSAAI FDAGVLSCLEYLEAAPW+ED++ ++A+L
Sbjct: 208 LMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWSEDEEYRIASL 267
Query: 236 LTQLHLENSGAGEVLKRVSLELAPSAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 295
L++LHLEN GA EVL+RVS+E +
Sbjct: 268 LSELHLENVGATEVLRRVSVEASNGNNGSNGGSNDEVLLNLLHIVLEG------------ 315
Query: 296 KDEKARREMKGLVSKMLRENSTSRGGAIGGDLRKESLYSACNGCLRLLHEQFEMAAGGDQ 355
KDEKARR+MK LVSKMLRENS+ G DLRKESLY AC+GCL L QF AA D
Sbjct: 316 KDEKARRDMKTLVSKMLRENSS------GNDLRKESLYLACDGCLHKLKRQFLQAAESDL 369
Query: 356 SEVAQIARQADNLHWMLDILVERQIAEDFLRTWAMQIELAELHGKVPAIHRYEVSRVTAR 415
V QIARQADNLHW+LDIL++RQIAEDF+ WA EL+E+H KVP +HR+E+SRVTAR
Sbjct: 370 ENVDQIARQADNLHWILDILIDRQIAEDFIVMWASLSELSEVHSKVPVVHRFEISRVTAR 429
Query: 416 LFVGVGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRACKGLDRHLIEDGLANTILTLPL 475
+FVG+GKGQIL KEVRC LL WL PFY+DFGWMRRA KGLDR+LIEDGL+NTILTLPL
Sbjct: 430 IFVGIGKGQILTPKEVRCLLLRNWLTPFYDDFGWMRRASKGLDRYLIEDGLSNTILTLPL 489
Query: 476 ATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEPEQPPRLRITA-ICENS 533
A QQE LAWF+RFLNS EDCPNIQRGFEVWWRRAFW+R + ++P RLR+TA ENS
Sbjct: 490 AWQQEFFLAWFDRFLNSNEDCPNIQRGFEVWWRRAFWRRKEQSQEPARLRVTASATENS 548
>AT5G60050.1 | chr5:24183680-24185264 REVERSE LENGTH=500
Length = 499
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/500 (41%), Positives = 306/500 (61%), Gaps = 62/500 (12%)
Query: 38 DKTRSSPTLFDMMANEQDYH-PRTAAAIHSIXXXXXXXXXXXXXRSMDRQVLLQDRVAEL 96
+ T S+PTLFDMM++E + PR + H+ RVA++
Sbjct: 50 ESTLSNPTLFDMMSDEHNRELPRRKS--HA-------------------------RVAQI 82
Query: 97 IGSCSPGNQFNDA-DSSDVRLTLTSKDGLSVTLCVHRHILVAHSRFFAAKLSDRWSKQQR 155
+ G + + DV+LT+ KDG VT+ VHR +L SRFF K++ S++++
Sbjct: 83 LTEFKNGVVYGHSLGPGDVKLTVVGKDGYRVTMDVHRKVLSEKSRFFMEKMN---SRREK 139
Query: 156 TLPHIVEISDCDDVEVYVETLRLMYCKDLRRRLMREDVSKVLGILKVSAAIVFDAGVLSC 215
+ H+VEIS+CDD+E+YVET+ LMY DL+++L+ E+V K+L +LKVSAAI FD GV+SC
Sbjct: 140 GVSHMVEISECDDLEIYVETVVLMYSDDLKKKLIGENVIKILALLKVSAAISFDEGVMSC 199
Query: 216 LEYLEAAPWAEDDDEKVAALLTQLHLENSGAGEVLKRVSLELAPSAVAXXXXXXXXXXXX 275
LE+LEA PW+ED++E V L +LHL + +L+RVS + + S+
Sbjct: 200 LEHLEAVPWSEDEEETVVTCLEELHLPDDSVTLILQRVSSQPSTSST------------- 246
Query: 276 XXXXXXXXXXXXXXXXXXXXKDEKARREMKGLVSKMLRENSTSRGGAIGGDLRKESLYSA 335
KD+KARREMK L+ K++RE + D+ +++LY
Sbjct: 247 --RTRTDDIFSKLLTGVLQAKDDKARREMKVLIFKLVREEA-------DYDVSRDTLYGL 297
Query: 336 CNGCLRLL-------HEQFEMAAGGDQSEVAQIARQADNLHWMLDILVERQIAEDFLRTW 388
C+ CL L Q + + +IAR+ADN+ WM+DIL+E+++ +F++ W
Sbjct: 298 CHRCLTSLVLCLSEVTTQMNDPGKDRGALMGEIAREADNMLWMVDILIEKKLCSEFVKLW 357
Query: 389 AMQIELAELHGKVPAIHRYEVSRVTARLFVGVGKGQILVSKEVRCQLLSTWLEPFYEDFG 448
A Q ELA LH K+P ++R+E+S++TA++ VG+GKG+ILV++E R +L+TWLE Y+DFG
Sbjct: 358 ADQKELANLHSKIPTMYRHEISKITAQICVGIGKGRILVNRETRFAVLNTWLEALYDDFG 417
Query: 449 WMRR-ACKGLDRHLIEDGLANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWW 507
WMRR + + LDR L+EDGL+ TILTL L QQ IL+ WF+RFL+ G+DCPN+QR FEVWW
Sbjct: 418 WMRRLSSRSLDRKLVEDGLSQTILTLSLRQQQVILMKWFDRFLSKGDDCPNVQRAFEVWW 477
Query: 508 RRAFWKRNGEPEQPPRLRIT 527
RRAF ++ PRL+IT
Sbjct: 478 RRAFIRQVLTEPDEPRLQIT 497
>AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521
Length = 520
Score = 333 bits (854), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 259/410 (63%), Gaps = 32/410 (7%)
Query: 105 QFNDADSSDVRLTLTSKDGLSVTLCVHRHILVAHSRFFAAKLSDRWSKQQRTLPHIVEIS 164
+F + SSD ++ L K G V L VH+ +LV HS FFA KL+++ S + +EI
Sbjct: 118 EFGEPGSSDAKVILVGKQGFCVKLSVHKKVLVDHSCFFAKKLAEKDS-----VFACLEIE 172
Query: 165 DCDDVEVYVETLRLMYCKDLRRRLMREDVSKVLGILKVSAAIVFDAGVLSCLEYLEAAPW 224
C+D E+YVET+ LMYCKD+++RLM+++VS+VL +LKV+ + F + + SCL+YLEA PW
Sbjct: 173 SCEDAELYVETIGLMYCKDMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEAVPW 232
Query: 225 -AEDDDEKVAALLTQLHLENSGAGEVLKRVSLELAPSAVAXXXXXXXXXXXXXXXXXXXX 283
E+++EKV + + +L E G VLKRV A +AV
Sbjct: 233 VGEEEEEKVISSILRLKTEGVGVTPVLKRV----ASNAV----------------DPPKE 272
Query: 284 XXXXXXXXXXXXKDEKARREMKGLVSKMLRENSTSRGGAIGGDLRKESLYSACNGCLRLL 343
K+EK+RREMK +V K+LRE + GA D +++YS+C CL +
Sbjct: 273 TLSRIIELVLRSKEEKSRREMKSIVLKLLRE----QNGANVADNFNDTIYSSCQTCLDSV 328
Query: 344 HEQFEMAAGGDQSEV--AQIARQADNLHWMLDILVERQIAEDFLRTWAMQIELAELHGKV 401
F+ A+ G++ E QIA +ADNL W+LD+L ERQ AE+F TWA Q ELA LH K+
Sbjct: 329 LSLFKQASEGEKPETDTKQIAVEADNLTWLLDVLAERQAAEEFSVTWANQKELALLHEKL 388
Query: 402 PAIHRYEVSRVTARLFVGVGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRACKGLDRHL 461
P + RY +SRVT+RLF+G+G+G++L SK+ R LL+TWL+P + D+ W++ C+ D L
Sbjct: 389 PLMSRYHISRVTSRLFIGIGRGELLPSKDTRLLLLTTWLQPLFNDYNWLQHGCRSFDGKL 448
Query: 462 IEDGLANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAF 511
+E+G+ TILTLPL QQ ILL+W FLN G+ CPN+QR FEVWWRR+F
Sbjct: 449 VEEGIGRTILTLPLEDQQSILLSWLGSFLNGGDGCPNLQRAFEVWWRRSF 498
>AT2G13690.1 | chr2:5706704-5708895 REVERSE LENGTH=545
Length = 544
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 190/358 (53%), Gaps = 28/358 (7%)
Query: 161 VEISDCDDVEVYVETLRLMYCKD--LRRRLMREDVSKVLGILKVSAAIVFDAGVLSCLEY 218
+E+ D +++ V+ ET+ LM+ + + ++ M V + + +L+V+A I F VLSCL+Y
Sbjct: 198 IEVCDVENLGVFRETVELMFEESNVIIKKFMTMGVYRAIDVLEVAAGIKFSRAVLSCLKY 257
Query: 219 LEAAPWAEDDDEKVAALLTQLHLENSGAGEVLKRVSLELAPSAVAXXXXXXXXXXXXXXX 278
LEA PW ED++EK+ LL ++ E+L R +
Sbjct: 258 LEAVPWTEDEEEKLRRLLGIYSFDDDAVSEILARFN-------------------SNETE 298
Query: 279 XXXXXXXXXXXXXXXXXKDEKARREMKGLVSKMLRENSTSRGGAIGGDLRKESLYSACNG 338
D R E+K LV +L ++S ++ KE +Y A
Sbjct: 299 NLQDSLSKKLVWSITSCSDVNPRNELKSLVKGLLCKSSVYEKEQ--PEINKEDIYRAGKC 356
Query: 339 CLRLLHEQFEMAAGGDQSE-----VAQIARQADNLHWMLDILVERQIAEDFLRTWAMQIE 393
C+ L + FE + S+ + I+R+ +N++W+L+I+++R+IAE+F+ W Q
Sbjct: 357 CVDSLAKLFEEGSSSSSSKKEKPLIESISREVENINWLLEIMIDREIAEEFVEIWGKQRR 416
Query: 394 LAELHGKVPAIHRYEVSRVTARLFVGVGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRA 453
L E+H +V + RYEVSRVT +F+ +GK ++ E R L+ W +P DFGW++R
Sbjct: 417 LVEMHERVSPMVRYEVSRVTGAIFIAMGKRRVQCGGEARAGLVEAWFKPMLVDFGWLQRC 476
Query: 454 CKGLDRHLIEDGLANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAF 511
KGLD +E+G+ T+LTLP+ Q ++ + WF F G +CPN+ + F++WWRR+F
Sbjct: 477 KKGLDMREVEEGMGQTLLTLPVKEQYQVFMEWFRWFSKHGTECPNLSKAFQIWWRRSF 534
>AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442
Length = 441
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 106 FNDADSSDVRLTLTSKDGLSVTLCVHRHILVAHSRFFAAKLSDRWSK-----QQRTLPHI 160
F D SSD+ + L +++G + H IL S++FA +LSD+W + + I
Sbjct: 14 FGDRSSSDIVVRLRNEEGRDDWIYCHSKILSEKSQYFADRLSDKWPTCKILDSRYCVEVI 73
Query: 161 VEISDCDDVEVYVETLRLMYC--KDLRRRLMREDVSKVLGILKVSAAIVFDAGVLSCLEY 218
+ SD D ++ LRL+Y D+ + +V LGIL V+ + V +C+ Y
Sbjct: 74 CQESDYDH---HINLLRLLYVVSDDVHEDNLCHNVKSALGILSVAKELSCPQIVTACVNY 130
Query: 219 LEAAPW 224
LEA PW
Sbjct: 131 LEAVPW 136
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 367 NLHWMLDILVERQIAEDFLRTWA-MQIELAELHGK-----VPAIH-RYEVSRVTARLFVG 419
++ W+ IL + ++ DF+ TWA + +L ++ + V A+ R +V VTA++
Sbjct: 263 DMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQLETTVVEAVEIRVKVIEVTAKVIEA 322
Query: 420 VGKGQILVSKEVRCQLLSTWLEPFY--------------EDFGWMRRACKGLDRHLIEDG 465
+G G +++ R Q++ WL PF E+ +R G +E
Sbjct: 323 IGYGTVILPTAKRLQMVKLWL-PFVRNTKPLVDSPVREDEENDTVRYKIDGEIWQALESS 381
Query: 466 LANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRA 510
+ IL LP A Q EIL W L+ P++ FEVW R+
Sbjct: 382 FVSIILALPSADQAEILTEW----LSKNGLYPDLTEAFEVWCYRS 422
>AT3G19920.1 | chr3:6929840-6931771 REVERSE LENGTH=417
Length = 416
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 351 AGGDQSEVAQIA--RQADNLHWMLDILVERQIAEDFLRTWAMQIELAELH-GKVPAIHRY 407
AGG Q A++A + A+ L WM + L + ++ W+ LA L P +
Sbjct: 249 AGGIQENEAELAVEKLAEELLWMTEKLRRYGAVAEGIKRWSYASGLASLSLTAAPRVQGL 308
Query: 408 EVSRVTARLFVGVGKGQILVSKEVRCQLLSTWLEPF-YEDFGWMRRACKGLDRHLIEDGL 466
V +++A L + + V +V +LL+ WL F + G G +R +E +
Sbjct: 309 MV-KISALLIGELARDSTQVPGQVTFRLLANWLPLFSHARNGLAFPVLTGYERVEVERAI 367
Query: 467 ANTILTLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVW 506
I TLP Q+ +L W F S + PN+Q ++ W
Sbjct: 368 DKAISTLPALDQEILLTNWLQDFSVSASEWPNLQPAYDRW 407
>AT4G10800.1 | chr4:6643678-6644529 FORWARD LENGTH=284
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 367 NLHWMLDILVERQIAEDFLRTWA-------MQIELAELHGKVPAIHRYEVSRVTARLFVG 419
++ W+ +L ++ +D + W + + EL ++ + + ++ VT ++
Sbjct: 106 DIEWLCKVLPRMELMKDLVVKWTDASSEILVIAQKCELDSRILGV-KVKLVEVTGKILEA 164
Query: 420 VGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRA--CKG---LDRHL---IEDGLANTIL 471
VG G ++V + R LL WL PF + A C+ +D L IE + + +L
Sbjct: 165 VGYGIVIVPSKSRTCLLKIWL-PFIRRLKTLVDAEGCEYEYRMDEDLCEFIEGSMVSLVL 223
Query: 472 TLPLATQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEPEQPPRLRIT 527
TLP Q E+ W G P++ FEVW R+ + E+ RL I
Sbjct: 224 TLPSNDQAEVFGEWMRGIGLEGVKFPDLSEAFEVWCYRSKSAKRRLVERCDRLAIV 279
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,799,962
Number of extensions: 375228
Number of successful extensions: 872
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 859
Number of HSP's successfully gapped: 12
Length of query: 533
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 430
Effective length of database: 8,282,721
Effective search space: 3561570030
Effective search space used: 3561570030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)