BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0569300 Os04g0569300|AK058648
(342 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12750.1 | chr1:4345100-4346688 REVERSE LENGTH=308 281 4e-76
AT2G29050.1 | chr2:12478245-12480121 FORWARD LENGTH=390 279 2e-75
AT3G53780.2 | chr3:19924729-19926648 REVERSE LENGTH=395 276 1e-74
AT1G63120.1 | chr1:23409054-23410725 REVERSE LENGTH=318 271 5e-73
AT5G07250.1 | chr5:2274437-2275935 REVERSE LENGTH=347 270 8e-73
AT4G23070.1 | chr4:12090690-12092077 REVERSE LENGTH=314 209 2e-54
AT1G52580.1 | chr1:19587637-19588958 FORWARD LENGTH=310 202 2e-52
AT1G77860.1 | chr1:29282643-29284458 REVERSE LENGTH=352 180 1e-45
>AT1G12750.1 | chr1:4345100-4346688 REVERSE LENGTH=308
Length = 307
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 178/300 (59%), Gaps = 16/300 (5%)
Query: 55 RHHR------TWVVPLXXXXXXXXXXXXXYYNNCP--ANGGRRDCVGRSFLRRLSFQPLR 106
R HR W+ P Y N+CP G DCV + LRR SFQPLR
Sbjct: 10 RKHRGDTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAK-LLRRFSFQPLR 68
Query: 107 ENPVLGPSAATLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLE 166
ENP LGPS++TL K GALDW VV GN+ WRL T+ WLHAG+IHL NM ++I GIRLE
Sbjct: 69 ENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLE 128
Query: 167 QQFGFWKVGLVYLVSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSN 226
QQFGF ++GL+YL+SGFGGS+LS LF+ ++ I+V SEL+TNWTIY +
Sbjct: 129 QQFGFIRIGLIYLISGFGGSILSALFLQKS-ISVGASGALLGLMGAMLSELLTNWTIYKS 187
Query: 227 RCXXXXXXXXXXXXXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQVSS--- 283
+ P VDNFAHIGG TGF LGF+LL+QPQ GW E +S
Sbjct: 188 KLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQY 247
Query: 284 ---AKSKYNAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 340
A+SKYN Q +L ++ L++AG GLV +F G +GN HC WCH L C PTS W C
Sbjct: 248 GARARSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307
>AT2G29050.1 | chr2:12478245-12480121 FORWARD LENGTH=390
Length = 389
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/290 (48%), Positives = 182/290 (62%), Gaps = 12/290 (4%)
Query: 60 WVVPLXXXXXXXXXXXXXYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLR 119
W+VP + NNCP N C+ R FL R +FQP++ENP+LGPS+ TL
Sbjct: 57 WLVPAIVVANIALFAISMFINNCPKNSAY--CLAR-FLGRFAFQPMKENPLLGPSSLTLE 113
Query: 120 KYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVYL 179
K GALD VVH ++ WRL T WLHAG+ H+ ANM+SL+ IGIRLEQ+FGF ++GL+Y+
Sbjct: 114 KMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYM 173
Query: 180 VSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXXXXXXX 239
+SGFGGS+LS LF +R GI+V SEL+TNWTIY+N+
Sbjct: 174 ISGFGGSLLSSLF-NRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIA 232
Query: 240 XXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ--------VSSAKSKYNAF 291
P VDNFAH+GGF +GFLLGFV LI+PQ+G+ Q SAKSK+ +
Sbjct: 233 INLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPY 292
Query: 292 QIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKCD 341
Q +L S+ LLIAG+ AGLV + +G D N HCSWCHYL+C+PTS W C
Sbjct: 293 QYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCK 342
>AT3G53780.2 | chr3:19924729-19926648 REVERSE LENGTH=395
Length = 394
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 180/286 (62%), Gaps = 7/286 (2%)
Query: 60 WVVPLXXXXXXXXXXXXXYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLR 119
W++P Y NNCP G DC FL R SFQ RENP+LGPS+ TL+
Sbjct: 67 WLIPCFVVANVAVFVITMYVNNCPKKSG--DCFA-DFLGRFSFQNTRENPLLGPSSLTLQ 123
Query: 120 KYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVYL 179
G LD VV G++ WRL + WLH G++HL NM++LL IGIR+E++FGF ++GL+YL
Sbjct: 124 TMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYL 183
Query: 180 VSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXXXXXXX 239
+SGFGGS+LS LF+ R+ I+V SE+ NWTIYSN+
Sbjct: 184 ISGFGGSILSALFL-RSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVA 242
Query: 240 XXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQVSSAKSKYNAFQI---ILL 296
P VDNFAHIGGFATGFLLGFVLLI+P +GW Q + +K + F+I IL
Sbjct: 243 VNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGAKPHRFKIYQGILW 302
Query: 297 TLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKCDK 342
T+S+ +L+AGF GL+S+F VDGN HCSWCHYL+CVPTS W C++
Sbjct: 303 TISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNR 348
>AT1G63120.1 | chr1:23409054-23410725 REVERSE LENGTH=318
Length = 317
Score = 271 bits (692), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 182/292 (62%), Gaps = 7/292 (2%)
Query: 54 ERHHRTWVVPLXXXXXXXXXXXXXYYNNCPAN--GGRRDCVGRSFLRRLSFQPLRENPVL 111
E H +W++P + N+CP G ++CV R FL R SFQPL+ENP+
Sbjct: 28 ETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVAR-FLGRFSFQPLKENPLF 86
Query: 112 GPSAATLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGF 171
GPS++TL K GAL+W VVH +Q WRL + WLHAG+IHL NM+SL+ IGIRLEQQFGF
Sbjct: 87 GPSSSTLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGF 146
Query: 172 WKVGLVYLVSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXX 231
+VGL+YL+SG GGS+LS LF+ + I+V SEL+TNWTIY+N+
Sbjct: 147 IRVGLIYLISGLGGSILSSLFL-QESISVGASGALFGLLGAMLSELLTNWTIYANKAAAL 205
Query: 232 XXXXXXXXXXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGWS---EQVSSAKSKY 288
PRVDNFAHIGGF TGF LGFVLL++PQ+GW S K KY
Sbjct: 206 ITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGWEASRTNTSRTKRKY 265
Query: 289 NAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 340
+ +Q +L +SV LL+ G LV +FKG +GN HC WCHYL+C PTS W C
Sbjct: 266 SMYQYVLFVVSVVLLVVGLTVALVMLFKGENGNKHCKWCHYLSCFPTSKWTC 317
>AT5G07250.1 | chr5:2274437-2275935 REVERSE LENGTH=347
Length = 346
Score = 270 bits (690), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/293 (50%), Positives = 182/293 (62%), Gaps = 11/293 (3%)
Query: 59 TWVVPLXXXXXXXXXXXXXYYNNCP----ANGGRRDCVGRSFLRRLSFQPLRENPVLGPS 114
+W+VP+ + NNCP ++ R CV + FL RLSF+PLR NP+ GPS
Sbjct: 55 SWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAK-FLGRLSFEPLRTNPLFGPS 113
Query: 115 AATLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKV 174
+ TL K GAL+W VV + WRL T WLHAG+IHL ANM+SL+ IGIRLEQQFGF ++
Sbjct: 114 SHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRI 173
Query: 175 GLVYLVSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXX 234
G++YL+SG GGSVLS LFI RN I+V SEL TNWTIYSN+
Sbjct: 174 GVIYLLSGIGGSVLSSLFI-RNSISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTL 232
Query: 235 XXXXXXXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGW-----SEQVSSAKSKYN 289
P VDNFAH+GGF TGFLLGF+LL +PQF W Q + + KY
Sbjct: 233 LFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKYK 292
Query: 290 AFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKCDK 342
+Q +L LS+ LLIAGF L+ +F+G +GN HC WCHYL CVPTSSW+CD
Sbjct: 293 TYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRCDD 345
>AT4G23070.1 | chr4:12090690-12092077 REVERSE LENGTH=314
Length = 313
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/267 (47%), Positives = 159/267 (59%), Gaps = 10/267 (3%)
Query: 78 YYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLRKYGALDWYGVVHGNQAWR 137
YYN+CP R C+ + FL R SF+ + NP+LGPS++TL K GAL W +VH Q WR
Sbjct: 50 YYNDCPHKSHR--CLAK-FLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVWR 106
Query: 138 LETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRNG 197
L T WLHAG+IHL ANM + IG+RLEQQFGF +VG +YLVSGF GS+LS LF+ +
Sbjct: 107 LLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFL-EDA 165
Query: 198 ITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXXXXXXXXXXXXXXXPRVDNFAHIG 257
I+V SEL+ NWT Y N+ P VDNFAHIG
Sbjct: 166 ISVGASSALFGLLGAMLSELLINWTTYDNKGVAIVMLLVIVGVNLGLGTLPPVDNFAHIG 225
Query: 258 GFATGFLLGFVLLIQPQFGWSE-QVS-----SAKSKYNAFQIILLTLSVALLIAGFAAGL 311
GF GFLLGF+LLI PQF W E QVS K KYN Q++L ++ + +AGF +GL
Sbjct: 226 GFFGGFLLGFLLLIHPQFEWEENQVSLMPGTIVKPKYNTCQLVLCIVASIVFVAGFTSGL 285
Query: 312 VSVFKGVDGNAHCSWCHYLTCVPTSSW 338
V +F+G N +C WCH L+ S W
Sbjct: 286 VILFRGDSLNRYCKWCHKLSYSSKSQW 312
>AT1G52580.1 | chr1:19587637-19588958 FORWARD LENGTH=310
Length = 309
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 150/266 (56%), Gaps = 12/266 (4%)
Query: 60 WVVPLXXXXXXXXXXXXXYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLR 119
W+VPL Y N+CPA +C+ L RLSFQP++EN +LGPS TLR
Sbjct: 34 WLVPLILAANFVTFATTMYVNDCPARSD--ECLLFDVLGRLSFQPIKENMLLGPSIPTLR 91
Query: 120 KYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVYL 179
K GAL+ V G + WRL + WLH G +HL ANMISL+ IG+RLEQ+FGF ++G +Y+
Sbjct: 92 KLGALERRLVEEGER-WRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYV 150
Query: 180 VSGFGGSVLSVLFISR-NGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXXXXXX 238
+SG GGS++S L S+ ++V SELITNWTIY N+C
Sbjct: 151 ISGLGGSLVSCLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILII 210
Query: 239 XXXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSE--------QVSSAKSKYNA 290
PRVDN AH GGF GF LGFVLL++PQ+G+ + KSK+
Sbjct: 211 VLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMKHKKSKHKC 270
Query: 291 FQIILLTLSVALLIAGFAAGLVSVFK 316
+Q I S+A+L+AGF AG + +
Sbjct: 271 YQHIFRFTSLAILLAGFIAGYTKLLR 296
>AT1G77860.1 | chr1:29282643-29284458 REVERSE LENGTH=352
Length = 351
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 148/295 (50%), Gaps = 14/295 (4%)
Query: 59 TWVVPLXXXXXXXXXXXXXYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATL 118
TW+V + N+C N C + L R SFQ L ENP+LGPSA+TL
Sbjct: 48 TWLVSVFVLLQIVLFAVTMGVNDCSGNS-HGHCSAK-LLGRFSFQSLSENPMLGPSASTL 105
Query: 119 RKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVY 178
G L W + ++ WR+ TS WLH+GL HL N+ SL+ +GI +EQQFG ++ ++Y
Sbjct: 106 EHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIY 165
Query: 179 LVSGFGGSVLSVLFISRNGITVXXXXXXXXXXXXXXSELITNWTIYSNRCXXXXXXXXXX 238
+SG GS+ +VLF+ RN ++ S L NW +Y+++
Sbjct: 166 FLSGIMGSLFAVLFV-RNIPSISSGAAFFGLIGAMLSALAKNWNLYNSKISALAIIFTIF 224
Query: 239 XXXXXXXXXPRVDNFAHIGGFATGFLLGFVLLIQPQFG----------WSEQVSSAKSKY 288
P +DNFA+IGGF +GFLLGFVLL +PQ + + ++ +
Sbjct: 225 TVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLK 284
Query: 289 NAFQIILLTLSVALLIAGFAAG-LVSVFKGVDGNAHCSWCHYLTCVPTSSWKCDK 342
F +L + L+ G AG L++ GV+ N HC WC Y+ CVPT W C
Sbjct: 285 EQFDRPVLRIICLLVFCGILAGVLLAACWGVNLNRHCHWCRYVDCVPTKKWSCSD 339
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,278,018
Number of extensions: 211744
Number of successful extensions: 581
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 551
Number of HSP's successfully gapped: 8
Length of query: 342
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 243
Effective length of database: 8,392,385
Effective search space: 2039349555
Effective search space used: 2039349555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 112 (47.8 bits)