BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0566500 Os04g0566500|AK111996
(322 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48410.2 | chr1:17886285-17891892 REVERSE LENGTH=1051 595 e-170
AT5G43810.1 | chr5:17611939-17616562 FORWARD LENGTH=989 562 e-160
AT2G27880.1 | chr2:11871488-11876712 FORWARD LENGTH=998 478 e-135
AT1G69440.1 | chr1:26101565-26105016 REVERSE LENGTH=991 336 1e-92
AT2G27040.1 | chr2:11536795-11541503 REVERSE LENGTH=925 271 4e-73
AT5G21150.1 | chr5:7193472-7198113 FORWARD LENGTH=897 268 2e-72
AT5G21030.1 | chr5:7139892-7144272 REVERSE LENGTH=851 243 1e-64
AT2G32940.1 | chr2:13972218-13976856 REVERSE LENGTH=879 236 2e-62
AT1G31280.1 | chr1:11181777-11185112 FORWARD LENGTH=1015 235 3e-62
AT1G31290.1 | chr1:11188293-11192317 FORWARD LENGTH=1195 220 1e-57
>AT1G48410.2 | chr1:17886285-17891892 REVERSE LENGTH=1051
Length = 1050
Score = 595 bits (1533), Expect = e-170, Method: Compositional matrix adjust.
Identities = 286/323 (88%), Positives = 298/323 (92%), Gaps = 2/323 (0%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVKVGGRNTVLVDAL+RRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPE+
Sbjct: 729 INVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEI 788
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLV AQAHRQELIQDLFK W+DP +G VTGGMIKELLI+F+R+TG KP RIIFYRD
Sbjct: 789 TKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGHKPLRIIFYRD 848
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVLLYELDAIRKACASLE YQPPVTFVVVQKRHHTRLFA NHND+ +VDRS
Sbjct: 849 GVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAQNHNDRHSVDRS 908
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD LQ+LTNNLC
Sbjct: 909 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLC 968
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASG + +RG RS R
Sbjct: 969 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASG-SMARGGGMAGRSTRGP 1027
Query: 301 G-NVAVRPLPALKENVKRVMFYC 322
N AVRPLPALKENVKRVMFYC
Sbjct: 1028 NVNAAVRPLPALKENVKRVMFYC 1050
>AT5G43810.1 | chr5:17611939-17616562 FORWARD LENGTH=989
Length = 988
Score = 562 bits (1448), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/325 (82%), Positives = 290/325 (89%), Gaps = 15/325 (4%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVK+GGRNTVLVDA++ RIPLVSD PTIIFGADVTHP GE+SSPSIAAVVASQDWPEV
Sbjct: 676 INVKMGGRNTVLVDAISCRIPLVSDIPTIIFGADVTHPENGEESSPSIAAVVASQDWPEV 735
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
TKYAGLV AQAHRQELIQDL+K WQDP RGTV+GGMI++LLISF++ATGQKP RIIFYRD
Sbjct: 736 TKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRD 795
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTF+VVQKRHHTRLFANNH D+ + DRS
Sbjct: 796 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRS 855
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNILPGTVVD+KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD +Q+LTNNLC
Sbjct: 856 GNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLC 915
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPE-TSDSGSMASGAATSRGLPPGVRSARV 299
YTYARCTRSVSIVPPAYYAHLAAFRARFY+EPE D+GS PG ++ +
Sbjct: 916 YTYARCTRSVSIVPPAYYAHLAAFRARFYLEPEIMQDNGS------------PGKKNTKT 963
Query: 300 A--GNVAVRPLPALKENVKRVMFYC 322
G+V V+PLPALKENVKRVMFYC
Sbjct: 964 TTVGDVGVKPLPALKENVKRVMFYC 988
>AT2G27880.1 | chr2:11871488-11876712 FORWARD LENGTH=998
Length = 997
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/322 (72%), Positives = 262/322 (81%), Gaps = 12/322 (3%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
INVK GGRNTVL DA+ R IPL++DRPTII GADVTHP PGEDSSPSIAAVVAS DWPE+
Sbjct: 688 INVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEI 747
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
KY GLVSAQAHR+E+IQDL+K+ QDP RG V G+I+E I+F+RATGQ PQRIIFYRD
Sbjct: 748 NKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQIPQRIIFYRD 807
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRS 180
GVSEGQF QVLL+E+ AIRKAC SL+ NY P VTFV+VQKRHHTRLF H ++ D+S
Sbjct: 808 GVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMTDKS 867
Query: 181 GNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLC 240
GNI PGTVVD+KICHP EFDFYL SHAGIQGTSRPAHYHVL DEN FTAD+LQ LTNNLC
Sbjct: 868 GNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLC 927
Query: 241 YTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARVA 300
YTYARCT+SVSIVPPAYYAHLAAFRAR+YME E SD GS S ++T+
Sbjct: 928 YTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTT-----------GV 976
Query: 301 GNVAVRPLPALKENVKRVMFYC 322
G V + LPA+K+NVK VMFYC
Sbjct: 977 GQV-ISQLPAIKDNVKEVMFYC 997
>AT1G69440.1 | chr1:26101565-26105016 REVERSE LENGTH=991
Length = 990
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/324 (51%), Positives = 211/324 (65%), Gaps = 34/324 (10%)
Query: 1 INVKVGGRNTVLVDALTRRIP--LVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWP 58
IN K+GG T L +++ IP L D P I GADVTHPHP +D SPS+AAVV S +WP
Sbjct: 699 INAKIGGSMTELYNSIPSHIPRLLRPDEPVIFMGADVTHPHPFDDCSPSVAAVVGSINWP 758
Query: 59 EVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFY 118
E +Y + +Q HRQE+IQDL M+KELL F +A + P RIIF+
Sbjct: 759 EANRYVSRMRSQTHRQEIIQDL-------------DLMVKELLDDFYKAVKKLPNRIIFF 805
Query: 119 RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVD 178
RDGVSE QF +VL EL +I+ AC+ + +Y P +TF VVQKRHHTRLF + + +
Sbjct: 806 RDGVSETQFKKVLQEELQSIKTACSKFQ-DYNPSITFAVVQKRHHTRLFRCDPDHE---- 860
Query: 179 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 238
NI PGTVVD+ I HP EFDFYLCSH G++GTSRP HYH+LWDEN+FT+DELQ L N
Sbjct: 861 ---NIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDELQRLVYN 917
Query: 239 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSAR 298
LCYT+ RCT+ +SIVPPAYYAHLAA+R R Y+E + +G + ++ SR PP
Sbjct: 918 LCYTFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESNGGSMNPSSVSRVGPP------ 971
Query: 299 VAGNVAVRPLPALKENVKRVMFYC 322
PLP L +NVK +MFYC
Sbjct: 972 -----KTIPLPKLSDNVKNLMFYC 990
>AT2G27040.1 | chr2:11536795-11541503 REVERSE LENGTH=925
Length = 924
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 194/323 (60%), Gaps = 26/323 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L T ++S PTII G DV+H PG+ PSIAAVV+S++WP +
Sbjct: 627 INAKLGGLNSMLSVERTPAFTVISKVPTIILGMDVSHGSPGQSDVPSIAAVVSSREWPLI 686
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQ-KPQRIIFYR 119
+KY V Q + E+I+ L K GT G+IKELL+ F ++ + KP+ II +R
Sbjct: 687 SKYRASVRTQPSKAEMIESLVK-----KNGTEDDGIIKELLVDFYTSSNKRKPEHIIIFR 741
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL ELD I +AC L+ N+ P +V QK HHT+ F +
Sbjct: 742 DGVSESQFNQVLNIELDQIIEACKLLDANWNPKFLLLVAQKNHHTKFFQPTSPE------ 795
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ PGT++D+KICHP DFYLC+HAG+ GT+RP HYHVL+DE F+ADELQ L ++L
Sbjct: 796 --NVPPGTIIDNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADELQELVHSL 853
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV 299
Y Y R T ++S+V P YAHLAA + +M+ E S + G T+
Sbjct: 854 SYVYQRSTSAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGITA------------ 901
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
G ++V LP LK+NV MF+C
Sbjct: 902 PGPISVAQLPRLKDNVANSMFFC 924
>AT5G21150.1 | chr5:7193472-7198113 FORWARD LENGTH=897
Length = 896
Score = 268 bits (686), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 192/323 (59%), Gaps = 26/323 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L + +P V+ PTII G DV+H PG+ PSIAAVV+S+ WP +
Sbjct: 599 INAKLGGLNSLLAMERSPAMPKVTQVPTIIVGMDVSHGSPGQSDIPSIAAVVSSRQWPLI 658
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRAT-GQKPQRIIFYR 119
+KY V Q+ + E+I +LFK P G GM +ELL+ F ++ +KP+ II +R
Sbjct: 659 SKYKACVRTQSRKMEMIDNLFK----PVNGK-DEGMFRELLLDFYYSSENRKPEHIIIFR 713
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL ELD + +AC L+ + P T +V QK HHT+ F + D
Sbjct: 714 DGVSESQFNQVLNIELDQMMQACKFLDDTWHPKFTVIVAQKNHHTKFFQSRGPD------ 767
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ PGT++DS+ICHP FDFYLC+HAG+ GT+RP HYHVL+DE F D+LQ L ++L
Sbjct: 768 --NVPPGTIIDSQICHPRNFDFYLCAHAGMIGTTRPTHYHVLYDEIGFATDDLQELVHSL 825
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV 299
Y Y R T ++S+V P YAHLAA + M+ E S + G T+
Sbjct: 826 SYVYQRSTTAISVVAPVCYAHLAAAQMGTVMKYEELSETSSSHGGITT------------ 873
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
G V V P+P L NV MF+C
Sbjct: 874 PGAVPVPPMPQLHNNVSTSMFFC 896
>AT5G21030.1 | chr5:7139892-7144272 REVERSE LENGTH=851
Length = 850
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 181/323 (56%), Gaps = 44/323 (13%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGE-DSSPSIAAVVASQDWPE 59
IN K+GG N+VL L+ +PLV PTII G DV+H PG+ D PSIAAVV+S++WP
Sbjct: 571 INAKLGGLNSVLDMELSGTMPLVMRVPTIIIGMDVSHGSPGQSDHIPSIAAVVSSREWPL 630
Query: 60 VTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYR 119
++KY V Q+ + E+I LFK D G+++ELL+ F ++G+KP II +R
Sbjct: 631 ISKYRACVRTQSPKVEMIDSLFKPVSDKD----DQGIMRELLLDFHSSSGKKPNHIIIFR 686
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL ELD + +Q HHT+ F +
Sbjct: 687 DGVSESQFNQVLNIELDQM-------------------MQINHHTKFFQ--------TES 719
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+LPGT++DS ICH DFYLC+HAG GT+RP HYHVL+DE F D+LQ L ++L
Sbjct: 720 PNNVLPGTIIDSNICHQHNNDFYLCAHAGKIGTTRPTHYHVLYDEIGFDTDQLQELVHSL 779
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRGLPPGVRSARV 299
Y Y R T ++S+V P YAHLAA + M+ E S + G T+
Sbjct: 780 SYVYQRSTTAISLVAPICYAHLAAAQMATAMKFEDMSETSSSHGGITT------------ 827
Query: 300 AGNVAVRPLPALKENVKRVMFYC 322
AG V V P+P L NV MF+C
Sbjct: 828 AGAVPVPPMPKLNTNVASSMFFC 850
>AT2G32940.1 | chr2:13972218-13976856 REVERSE LENGTH=879
Length = 878
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 184/324 (56%), Gaps = 37/324 (11%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
IN K+GG N++L + IPL++ PT+I G DV+H PG PS+AAVV S+ WP +
Sbjct: 590 INSKLGGINSLLGIEYSYNIPLINKIPTLILGMDVSHGPPGRADVPSVAAVVGSKCWPLI 649
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRAT-GQKPQRIIFYR 119
++Y V Q+ R E+I LF+ ++ +G G++ EL + F R + +KP++II +R
Sbjct: 650 SRYRAAVRTQSPRLEMIDSLFQPIENTEKGD--NGIMNELFVEFYRTSRARKPKQIIIFR 707
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
DGVSE QF QVL E+D I KA L + P T +V QK HHT+LF +
Sbjct: 708 DGVSESQFEQVLKIEVDQIIKAYQRLGESDVPKFTVIVAQKNHHTKLFQAKGPE------ 761
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
N+ GTVVD+KI HPT +DFY+C+HAG GTSRPAHYHVL DE F+ D+LQ L ++L
Sbjct: 762 --NVPAGTVVDTKIVHPTNYDFYMCAHAGKIGTSRPAHYHVLLDEIGFSPDDLQNLIHSL 819
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFR-ARFYMEPETSDSGSMASGAATSRGLPPGVRSAR 298
Y R T + SIV P YAHLAA + A+F S+ G
Sbjct: 820 SYVNQRSTTATSIVAPVRYAHLAAAQVAQFTKFEGISEDGK------------------- 860
Query: 299 VAGNVAVRPLPALKENVKRVMFYC 322
V LP L ENV+ MF+C
Sbjct: 861 ------VPELPRLHENVEGNMFFC 878
>AT1G31280.1 | chr1:11181777-11185112 FORWARD LENGTH=1015
Length = 1014
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 163/278 (58%), Gaps = 23/278 (8%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEV 60
+N KVGG N L+D + + + GADV HP + SPSI AVV + +WPE
Sbjct: 716 MNAKVGGSNVELMDTFSF---FKKEDEVMFIGADVNHPAARDKMSPSIVAVVGTLNWPEA 772
Query: 61 TKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYRD 120
+YA V AQ HR+E IQ G EL+ + +ATG++P +I+ +RD
Sbjct: 773 NRYAARVIAQPHRKEEIQGF-------------GDACLELVKAHVQATGKRPNKIVIFRD 819
Query: 121 GVSEGQFYQVLLYELDAIRKACASLEPN-YQPPVTFVVVQKRHHTRLFANNHNDQRTVDR 179
GVS+ QF VL EL ++ + E N Y P +T +V QKRH TR F +ND
Sbjct: 820 GVSDAQFDMVLNVELLDVK---LTFEKNGYNPKITVIVAQKRHQTRFFPATNNDGSD--- 873
Query: 180 SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL 239
GN+ GTVVD+K+ HP E+DFYLCSH G GTS+P HY+ LWDE FT+D++Q L +
Sbjct: 874 KGNVPSGTVVDTKVIHPYEYDFYLCSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEM 933
Query: 240 CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDS 277
C+T+ RCT+ VS+VPP YYA + AFR R Y E + +
Sbjct: 934 CFTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSREK 971
>AT1G31290.1 | chr1:11188293-11192317 FORWARD LENGTH=1195
Length = 1194
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 164/291 (56%), Gaps = 28/291 (9%)
Query: 1 INVKVGGRNTVLVDALTRRIPLVSDRPTIIF-GADVTHPHPGEDSSPSIAAVVASQDWPE 59
IN KVGG N LVD + ++F GADV HP ++ SPSI AVV + +WPE
Sbjct: 894 INAKVGGTNVELVDNI---FSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVVGTLNWPE 950
Query: 60 VTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISFKRATGQKPQRIIFYR 119
+YA V AQ+HR+E IQ G EL+ + +A ++P +I+ +R
Sbjct: 951 ANRYAARVKAQSHRKEEIQGF-------------GETCWELIEAHSQAPEKRPNKIVIFR 997
Query: 120 DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF-ANNHNDQRTVD 178
DGVS+GQF VL EL ++ A + Y P +T +V QKRH TR F A D R
Sbjct: 998 DGVSDGQFDMVLNVELQNVKDVFAKV--GYNPQITVIVAQKRHQTRFFPATTSKDGRA-- 1053
Query: 179 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 238
GN+ GTVVD+ I HP E+DFYLCS G GTS+P HY+VL DE F ++++Q L +
Sbjct: 1054 -KGNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFD 1112
Query: 239 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAATSRG 289
LC+T+ RCT+ V++VPP YA AA R R Y E + M + SRG
Sbjct: 1113 LCFTFTRCTKPVALVPPVSYADKAASRGRVYYE-----ASLMKKNSKQSRG 1158
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,152,321
Number of extensions: 295272
Number of successful extensions: 708
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 10
Length of query: 322
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 223
Effective length of database: 8,392,385
Effective search space: 1871501855
Effective search space used: 1871501855
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)