BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0559400 Os04g0559400|AK106376
(410 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49680.1 | chr3:18422768-18425473 FORWARD LENGTH=414 480 e-136
AT1G10070.1 | chr1:3288255-3290164 FORWARD LENGTH=389 437 e-123
AT1G50090.1 | chr1:18554641-18556794 REVERSE LENGTH=368 383 e-107
AT1G50110.1 | chr1:18558203-18560219 REVERSE LENGTH=357 380 e-105
AT1G10060.2 | chr1:3284445-3286837 FORWARD LENGTH=385 378 e-105
AT3G19710.1 | chr3:6847202-6849429 REVERSE LENGTH=355 357 5e-99
AT5G27410.1 | chr5:9678821-9682468 FORWARD LENGTH=560 72 4e-13
AT3G05190.1 | chr3:1471457-1475067 FORWARD LENGTH=556 68 7e-12
>AT3G49680.1 | chr3:18422768-18425473 FORWARD LENGTH=414
Length = 413
Score = 480 bits (1235), Expect = e-136, Method: Compositional matrix adjust.
Identities = 220/352 (62%), Positives = 294/352 (83%), Gaps = 9/352 (2%)
Query: 60 STLVTAAYYTGTAELVDFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPA 119
STLVT EL D +W+T+GF P D+MYVM+C+ +G F+KGEL +G IE++P+
Sbjct: 70 STLVT--------ELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPS 121
Query: 120 AGVLNYGQGLLEGLRAHRKEDGS-VLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKL 178
AGVLNYGQGL EGL+A+RK+DG+ +LLFRP+ENA RMR GA+R+CMPAP+VEQF+EA+
Sbjct: 122 AGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTE 181
Query: 179 TILANKRWVPPTGKGSLYIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISL 238
T+LANKRWVPP GKGSLY+RPLL+G+GA+LG+APAPEYTF+++ PVG+YFK+G++PI+L
Sbjct: 182 TVLANKRWVPPPGKGSLYVRPLLMGTGAVLGLAPAPEYTFIIYVSPVGNYFKEGVAPINL 241
Query: 239 LTEEEYQCAAPGGTGDIKTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNI 298
+ E E+ A PGGTG +KTIGNYA+ + A+ AK +G+SDVLYLD ++K+++EE+SSCNI
Sbjct: 242 IVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCIYKRYLEEVSSCNI 301
Query: 299 FMVKDNIISTPLLTGTVLPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSV 358
F+VKDN+ISTP + GT+LPGITR+S+I+ AR+ GFQVEE +T+DELL+ADEVFCTGT+V
Sbjct: 302 FIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAV 361
Query: 359 VLSSVGCIVYQGRRVEYGNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410
V+S VG + Y+G+RV YG F TVS+QLY+ LT++Q GL+ED+M WTV L+
Sbjct: 362 VVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413
>AT1G10070.1 | chr1:3288255-3290164 FORWARD LENGTH=389
Length = 388
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 262/344 (76%), Gaps = 1/344 (0%)
Query: 67 YYTGTAELVDFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPAAGVLNYG 126
Y G D +W+ LGF P D+MYVM+CS++G FT+GEL PYG I+L+P+AGVLNYG
Sbjct: 46 YQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYG 105
Query: 127 QGLLEGLRAHRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKLTILANKRW 186
Q + EG +A+RKE+G +LLFRPD NA+RM++GA+R+ MP+PSV+QF+ A+K T LANKRW
Sbjct: 106 QAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRW 165
Query: 187 VPPTGKGSLYIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISLLTEEEYQC 246
VPP GKG+LYIRPLL+GSG ILG+ PAPEYTF+V+A PVG+YFK+G++ ++L EEEY
Sbjct: 166 VPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVR 225
Query: 247 AAPGGTGDIKTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNIFMVKDNII 306
AAPGG G +K+I NYA + A RAK RG SDVLYLD V KK++EE SSCN+F+VK I
Sbjct: 226 AAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTI 285
Query: 307 STPLLTGTVLPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSVVLSSVGCI 366
STP GT+L GITR+S++E A G+QV E + +DE++DADEVFCTGT+VV++ VG I
Sbjct: 286 STPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTI 345
Query: 367 VYQGRRVEYGNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410
YQ +RVEY +V Q+L S L IQ GL+ED+ GW +N
Sbjct: 346 TYQEKRVEYKTGD-ESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
>AT1G50090.1 | chr1:18554641-18556794 REVERSE LENGTH=368
Length = 367
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 251/337 (74%), Gaps = 6/337 (1%)
Query: 76 DFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPAAGVLNYGQGLLEGLRA 135
+ W+ LGF VPTD+MYV +C + F+ GE+VPYG I ++P AG+LNYGQGL EGL+A
Sbjct: 23 NVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKA 82
Query: 136 HRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKLTILANKRWVPPTGKGSL 195
+R EDG + LFRPD+NA+RM+ GADRLCM PS EQF+EA+K T+LAN +WVPP GKG+L
Sbjct: 83 YRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPGKGAL 142
Query: 196 YIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISLLTEEEYQCAAPGGTGDI 255
YIRPLLIG+GA+LGVA APEYTF+++ PVG+Y K S ++L + ++ A GGTG +
Sbjct: 143 YIRPLLIGTGAVLGVASAPEYTFLIYTSPVGNYHK-ASSGLNLKVDHNHRRAHFGGTGGV 201
Query: 256 KTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGTV 315
K+ NY+ V + AK G SDVL+LD K +EE+S+CNIF++K NI+STP +GT+
Sbjct: 202 KSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTCNIFILKGNIVSTPPTSGTI 261
Query: 316 LPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVEY 375
LPGITR+SI E AR +G++V+E +++DELL+A+EVFCTGT+VV+ +V + + +RV+Y
Sbjct: 262 LPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKY 321
Query: 376 --GNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410
G + F T +L+ LT IQ G+VED GW ++++
Sbjct: 322 RTGEEAFST---KLHLILTNIQMGVVEDKKGWMMEID 355
>AT1G50110.1 | chr1:18558203-18560219 REVERSE LENGTH=357
Length = 356
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 248/335 (74%), Gaps = 2/335 (0%)
Query: 76 DFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPAAGVLNYGQGLLEGLRA 135
+ WE LGF P D+MYV +C + FT+G++VPYG I ++P + +LNYGQGL EGL+A
Sbjct: 20 NVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKA 79
Query: 136 HRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKLTILANKRWVPPTGKGSL 195
+R ED + +FRPD+NALRM+ GA+RLCM P++EQF+EA+K T+LANK+WVPP GKG+L
Sbjct: 80 YRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPGKGTL 139
Query: 196 YIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISLLTEEEYQCAAPGGTGDI 255
YIRPLL+GSGA LGVAPAPEYTF+++A PVG Y K S ++L + +Y A GGTG +
Sbjct: 140 YIRPLLLGSGATLGVAPAPEYTFLIYASPVGDYHKVS-SGLNLKVDHKYHRAHSGGTGGV 198
Query: 256 KTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGTV 315
K+ NY+ V + AK G SDVL+LD + +EEL++CNIF+VK NI+STP +GT+
Sbjct: 199 KSCTNYSPVVKSLLEAKSAGFSDVLFLDAATGRNIEELTACNIFIVKGNIVSTPPTSGTI 258
Query: 316 LPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVEY 375
LPG+TR+SI E A +G+QVEE +++DELL+A+EVFCTGT+VV+ +V + + ++V+Y
Sbjct: 259 LPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKY 318
Query: 376 GNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410
+ +S +L+S LT IQ G+VED GW V ++
Sbjct: 319 RTGE-AALSTKLHSMLTNIQMGVVEDKKGWMVDID 352
>AT1G10060.2 | chr1:3284445-3286837 FORWARD LENGTH=385
Length = 384
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 240/337 (71%), Gaps = 1/337 (0%)
Query: 73 ELVDFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPAAGVLNYGQGLLEG 132
E D +W+ LGF V TDFM+ + +G F +G L YG IELNPAAG+LNYGQGL+EG
Sbjct: 48 EYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEG 107
Query: 133 LRAHRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKLTILANKRWVPPTGK 192
++A+R EDG VLLFRP+ NA+RM++GA+R+CM +PSV QF+E +K T+LAN+RWVPP GK
Sbjct: 108 MKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPGK 167
Query: 193 GSLYIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISLLTEEEYQCAAPGGT 252
GSLY+RPLL GSGA LGVA A EYTF+VF PV +YFK+G + ++L EE A GGT
Sbjct: 168 GSLYLRPLLFGSGASLGVAAASEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGT 227
Query: 253 GDIKTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLT 312
G +K I NY + RAK RG SDVLYLD K +EE+S+ NIF+VK N I TP +
Sbjct: 228 GGVKAISNYGPVLEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNTIVTPATS 287
Query: 313 GTVLPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSVVLSSVGCIVYQGRR 372
GT+L GITR+SIIE A LG++VEE + ++EL +A+EVFCTGT+ ++SVG I ++ R
Sbjct: 288 GTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTR 347
Query: 373 VEYGNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQL 409
EY V+QQL S L IQ G ++D+ W +Q+
Sbjct: 348 TEY-KVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQI 383
>AT3G19710.1 | chr3:6847202-6849429 REVERSE LENGTH=355
Length = 354
Score = 357 bits (917), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 235/336 (69%), Gaps = 2/336 (0%)
Query: 75 VDFNWETLGFQPVPTDFMYVMRCSEEGVFTKGELVPYGPIELNPAAGVLNYGQGLLEGLR 134
+ WE L F+ V TD+MYV +C+ F +G+++P+ ++LNP A VL YGQGL EGL+
Sbjct: 18 ANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLK 77
Query: 135 AHRKEDGSVLLFRPDENALRMRVGADRLCMPAPSVEQFLEAIKLTILANKRWVPPTGKGS 194
A+R EDG +LLFRPD+N LR++ GADRL MP PSV+QF+ AIK LANK+W+PP GKG+
Sbjct: 78 AYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPGKGT 137
Query: 195 LYIRPLLIGSGAILGVAPAPEYTFVVFACPVGHYFKDGLSPISLLTEEEYQCAAPGGTGD 254
LYIRP+L GSG ILG P PE TF FACPVG Y KD S ++L E++++ A P GTG
Sbjct: 138 LYIRPILFGSGPILGSFPIPETTFTAFACPVGRYHKDN-SGLNLKIEDQFRRAFPSGTGG 196
Query: 255 IKTIGNYASAVYAKERAKERGHSDVLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGT 314
+K+I NY AK++G SD+L+LD K +EEL + N+FM+K N++STP + GT
Sbjct: 197 VKSITNYCPVWIPLAEAKKQGFSDILFLDAATGKNIEELFAANVFMLKGNVVSTPTIAGT 256
Query: 315 VLPGITRRSIIEYARSLGFQVEECLITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVE 374
+LPG+TR ++E R G+QVEE I + + LDADE FCTGT+ +++S+ + ++ ++
Sbjct: 257 ILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTG 316
Query: 375 YGNQKFRTVSQQLYSALTAIQKGLVEDSMGWTVQLN 410
+ + T++ +LY L+ IQ G VED+ GWTV+++
Sbjct: 317 FKTGE-ETLAAKLYETLSDIQTGRVEDTKGWTVEID 351
>AT5G27410.1 | chr5:9678821-9682468 FORWARD LENGTH=560
Length = 559
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 31/299 (10%)
Query: 107 ELVPYGPIELNPAAGVLNYGQGLLEGLRAHRKEDGSVLLFRPDENALRMRVGADRLCMP- 165
E+VP +++ V+ G + EGLR ++ + +F+ +E+ R+ A L
Sbjct: 266 EIVPREMAKVSVFDSVVQGGDSVWEGLRIYKGK-----VFKLEEHLDRLSDSAKALAFNN 320
Query: 166 APSVEQFLEAIKLTILANKRWVPPTGKGSLYIR-PLLIGSGAILGVAPAPEY---TFVVF 221
P+ E+ EAI T++ N + + +IR L G G++PA T +V
Sbjct: 321 VPTREEIKEAIFRTLITNGMF------DNTHIRLSLTRGKKVTSGMSPAFNRYGCTLIVL 374
Query: 222 A---CPVGHYFKDGLSPISLLTEEEYQCAAPGGTGDIKTIGNYASAVYAKERAKERGHSD 278
A PV Y DG I L+T + +P N + + AK + D
Sbjct: 375 AEWKPPV--YDNDG--GIVLVTATTRR-NSPNNLDSKIHHNNLLNNILAKIESNNANVDD 429
Query: 279 VLYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGTVLPGITRRSIIEYARSLGFQVEEC 338
+ LD FV E ++ NIFMVK + + TP LPGITR +++E F +EE
Sbjct: 430 AIMLD--KDGFVSETNATNIFMVKKDRVLTPH-ADYCLPGITRATVMELVVKENFILEER 486
Query: 339 LITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVEYGNQKFRTVSQQLYSALTAIQKG 397
I++ E ADEV+ TGT LS V + GR + G K V+++L +A + G
Sbjct: 487 RISLSEFHTADEVWTTGTMGELSPV--VKIDGRVI--GEGKVGPVTRRLQNAYKKLTDG 541
>AT3G05190.1 | chr3:1471457-1475067 FORWARD LENGTH=556
Length = 555
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 33/303 (10%)
Query: 107 ELVPYGPIELNPAAGVLNYGQGLLEGLRAHRKEDGSVLLFRPDENALRMRVGADRLCMP- 165
E++P +++ V+ G + EGLR ++ + +F+ +E+ R+ A L
Sbjct: 269 EILPREMAKVSVFDSVVQGGDSVWEGLRIYKGK-----IFKLEEHLDRLFDSAKALAFDN 323
Query: 166 APSVEQFLEAIKLTILANKRWVPPTGKGSLYIR-PLLIGSGAILGVAPAPEY---TFVVF 221
P+ E+ EAI T++ N + + +IR L G G++PA T +V
Sbjct: 324 VPAREEVKEAIFRTLITNGMF------DNTHIRLSLTRGKKVTSGMSPAYNRYGCTLIVL 377
Query: 222 A--CPVGHYFKDGLSPISLLTEEEYQCAAPGGTGDIKTIGNYASAVYAKERAKERGHSDV 279
A P + + G+ ++ T +P N + + AK + +D
Sbjct: 378 AEWKPPVYDNEGGIVLVTATTRRN----SPNNLDSKIHHNNLLNNILAKIESNNTNAADA 433
Query: 280 LYLDPVHKKFVEELSSCNIFMVKDNIISTPLLTGTVLPGITRRSIIEYARSLGFQVEECL 339
+ LD +V E ++ NIFMVK + TP LPGITR +++E F +EE
Sbjct: 434 IMLD--KDGYVSETNATNIFMVKKGCVLTPH-ADYCLPGITRATVMELVVKENFILEERR 490
Query: 340 ITIDELLDADEVFCTGTSVVLSSVGCIVYQGRRVEYGNQKFRTVSQQLYSALTAIQKGLV 399
I++ E A+EV+ TGT LS V + GR + G+ K V++ L +A K L
Sbjct: 491 ISLSEFHTANEVWTTGTMGELSPV--VKIDGRVI--GDGKVGPVTRTLQNAY----KKLT 542
Query: 400 EDS 402
EDS
Sbjct: 543 EDS 545
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,208,890
Number of extensions: 360805
Number of successful extensions: 662
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 648
Number of HSP's successfully gapped: 8
Length of query: 410
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,337,553
Effective search space: 2576303877
Effective search space used: 2576303877
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)