BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0555700 Os04g0555700|AK069329
(139 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 238 6e-64
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 236 3e-63
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 233 3e-62
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 222 4e-59
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 222 4e-59
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 219 3e-58
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 216 5e-57
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 215 6e-57
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 180 2e-46
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 171 1e-43
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 167 1e-42
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 137 1e-33
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 238 bits (608), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 113/139 (81%), Positives = 129/139 (92%), Gaps = 2/139 (1%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ASGMAV DECKLKF ELKSKR++RFI F+ID QQVVV++LG P +TYDDFTAS+
Sbjct: 1 MANAASGMAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASL 58
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA+ECRYAVFDFDF+TDENCQKSKIFFI+WSPD+S+VR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKARAL 139
LQATDPSEMS DI+K+RAL
Sbjct: 119 LQATDPSEMSFDIIKSRAL 137
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 236 bits (602), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 108/138 (78%), Positives = 124/138 (89%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANSASGM V DECKLKF ELK+KR++RFI FKIDE+ QQV++D+LG P +TY+DFT S+
Sbjct: 1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P ECRYAV+D+DF T ENCQKSKIFFI+WSPDTS+VRSKMLYASSKDRFKRELDGIQVE
Sbjct: 61 PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKARA 138
LQATDPSEMS+DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGRV 138
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 233 bits (593), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 125/137 (91%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MANSASGM V DECK+KF ELK+KR++RFI FKIDE+ QQV +++LG P +TYDDFT+S+
Sbjct: 1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P ECRYAV+DFDF T++NCQKSKIFFI+WSPDTS+VRSKMLYASSKDRFKRE++GIQVE
Sbjct: 61 PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120
Query: 121 LQATDPSEMSMDIVKAR 137
LQATDPSEMS+DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 222 bits (566), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 2/139 (1%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ASGMAV DECKLKF ELK+KR++RFI F+ID QQVVV++LG P + YDDFT +
Sbjct: 1 MANAASGMAVEDECKLKFLELKAKRNYRFIIFRID--GQQVVVEKLGSPQENYDDFTNYL 58
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P +ECRYAV+DFDF T EN QKSKIFFI+WSPD+S+VR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKARAL 139
LQATDPSEMS+DI+K+RAL
Sbjct: 119 LQATDPSEMSLDIIKSRAL 137
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 222 bits (566), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 124/137 (90%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ASGMAV D+CKL+F ELK+KR+ RFI +KI+E+ +QV+V+++G+P TY+DF AS+
Sbjct: 1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA ECRYA++DFDFVT ENCQKSKIFFI+W PD +KVRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKAR 137
LQATDP+EM +D++K+R
Sbjct: 121 LQATDPTEMDLDVLKSR 137
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 219 bits (558), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 122/137 (89%)
Query: 2 ANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP 61
AN+ASGMAV D+CKL+F ELK+KR+ RFI +KI+E+ +QVVV+++GQP TY++F A +P
Sbjct: 13 ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
A ECRYA++DFDFVT ENCQKSKIFFI+W PD +KVRSKM+YASSKDRFKRELDGIQVEL
Sbjct: 73 ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132
Query: 122 QATDPSEMSMDIVKARA 138
QATDP+EM +D+ ++RA
Sbjct: 133 QATDPTEMDLDVFRSRA 149
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 216 bits (549), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 122/137 (89%), Gaps = 2/137 (1%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ASGMAV D+CKLKF ELK+KR+FR I +KI+++ QV+V++LG+P +YDDF AS+
Sbjct: 1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDK--QVIVEKLGEPEQSYDDFAASL 58
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA +CRY ++DFDFVT ENCQKSKIFFI+WSPDT+KVR KM+YASSKDRFKRELDGIQVE
Sbjct: 59 PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 118
Query: 121 LQATDPSEMSMDIVKAR 137
LQATDP+EM +D+ K+R
Sbjct: 119 LQATDPTEMGLDVFKSR 135
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 215 bits (548), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 122/138 (88%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
MAN+ASGMAV D+CKLKF ELK+KR+ RFI +KI+E +QV+V+++G+PG T++D AS+
Sbjct: 1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
PA ECRYA+FDFDFV+ E +S+IFF++WSPDT++VRSKM+YASSKDRFKRELDGIQVE
Sbjct: 61 PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120
Query: 121 LQATDPSEMSMDIVKARA 138
LQATDP+EM +D+ K+RA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 180 bits (457), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 108/136 (79%)
Query: 3 NSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPA 62
N+ SGM V DE K F EL+ K++ R++ FKIDE ++VVV++ G P ++YDDF AS+P
Sbjct: 10 NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69
Query: 63 SECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQ 122
++CRYAV+DFDFVT ENCQKSKIFF +WSP TS +R+K+LY++SKD+ REL GI E+Q
Sbjct: 70 NDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQ 129
Query: 123 ATDPSEMSMDIVKARA 138
ATDP+E+ +++++ RA
Sbjct: 130 ATDPTEVDLEVLRERA 145
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 171 bits (433), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 105/135 (77%)
Query: 4 SASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPAS 63
+ +GM V DEC F ++K K+ R+I FKI+E++++V VD++G G++Y D S+P
Sbjct: 8 ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67
Query: 64 ECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQA 123
+CRYAVFDFDFVT +NC+KSKIFFI+WSP+ SK+R+K+LYA+SKD +R L+GI ELQA
Sbjct: 68 DCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQA 127
Query: 124 TDPSEMSMDIVKARA 138
TDP+EM DI++ RA
Sbjct: 128 TDPTEMGFDIIQDRA 142
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 167 bits (423), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 105/138 (76%)
Query: 1 MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60
+ + SGM + D+CK F E+K K+ R++ +K++E++++V VD++G G++YDD AS+
Sbjct: 3 LKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASL 62
Query: 61 PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120
P +CRYAVFDFD+VT +NC+ SKIFFI+WSP+ S++R KM+YA+SK +R LDG+ E
Sbjct: 63 PEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYE 122
Query: 121 LQATDPSEMSMDIVKARA 138
LQATDP+EM D ++ RA
Sbjct: 123 LQATDPTEMGFDKIQDRA 140
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 96/136 (70%), Gaps = 11/136 (8%)
Query: 8 MAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRL------GQPGDTYDDFTASMP 61
M + D+CKL F ELK +R+FR I +KI++ QV+V++ G+ +Y++F S+P
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIED-NMQVIVEKHHYKKMHGEREQSYEEFANSLP 59
Query: 62 ASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVEL 121
A ECRYA+ D +FV E KI FI+WSP T+K+R KM+Y+S+KDRFKRELDGIQVE
Sbjct: 60 ADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEF 115
Query: 122 QATDPSEMSMDIVKAR 137
ATD +++S+D ++ R
Sbjct: 116 HATDLTDISLDAIRRR 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,757,717
Number of extensions: 101153
Number of successful extensions: 287
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 283
Number of HSP's successfully gapped: 12
Length of query: 139
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 51
Effective length of database: 8,693,961
Effective search space: 443392011
Effective search space used: 443392011
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 106 (45.4 bits)