BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0551500 Os04g0551500|AK068749
(360 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 127 7e-30
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 125 3e-29
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 123 1e-28
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 123 2e-28
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 122 3e-28
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 121 5e-28
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 121 6e-28
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 121 6e-28
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 120 1e-27
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 119 2e-27
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 119 3e-27
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 118 5e-27
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 117 8e-27
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 117 8e-27
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 117 1e-26
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 114 8e-26
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 91 7e-19
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%)
Query: 94 RKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCS 153
+K +A+ P CQV GC L K+YH+RH+VCE H+K V+V+G EQRFCQQCS
Sbjct: 110 KKSRASNLCSQNPLCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCS 169
Query: 154 RFHVLAEFDDAKKSCRRRLAGHNERRRR 181
RFH L+EFDD K+SCRRRLAGHNERRR+
Sbjct: 170 RFHFLSEFDDGKRSCRRRLAGHNERRRK 197
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 79/130 (60%), Gaps = 9/130 (6%)
Query: 55 CLKLGKRPC---FWXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKEKAATAVPVVPRCQVE 111
CLKLGKR FW ++K K+ VPRCQ++
Sbjct: 126 CLKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVA------RKKTKSCGQSMQVPRCQID 179
Query: 112 GCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRR 171
GC++ L K+YHR+H+VCE H+K P+VVV G E+RFCQQCSRFH ++EFD+ K+SCR+R
Sbjct: 180 GCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKR 239
Query: 172 LAGHNERRRR 181
L+ HN RRR+
Sbjct: 240 LSHHNARRRK 249
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 64/79 (81%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
P CQVEGC++ L K+YHR+H++CE H+K P+VVV G E+RFCQQCSRFH L+EFD+
Sbjct: 166 TPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEK 225
Query: 165 KKSCRRRLAGHNERRRRSN 183
K+SCRRRL+ HN RRR+ N
Sbjct: 226 KRSCRRRLSDHNARRRKPN 244
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 66/90 (73%)
Query: 106 PRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAK 165
P CQV+ C L K+YHRRHKVCEVH+KA + +V QRFCQQCSRFH+L+EFD+ K
Sbjct: 118 PMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 177
Query: 166 KSCRRRLAGHNERRRRSNASEAMARGSAHP 195
+SCRRRLAGHN RRR++ E +A G P
Sbjct: 178 RSCRRRLAGHNRRRRKTTQPEEVASGVVVP 207
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 108 CQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKS 167
CQVE C+ L VK+YHRRHKVCE+H+KA V G QRFCQQCSRFH+L EFD+ K+S
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165
Query: 168 CRRRLAGHNERRRRSN 183
CRRRLAGHN+RRR++N
Sbjct: 166 CRRRLAGHNKRRRKTN 181
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 108 CQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKS 167
CQV+ C L VK+YHRRHKVCE+H+KA +V G QRFCQQCSRFHVL EFD+ K+S
Sbjct: 127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186
Query: 168 CRRRLAGHNERRRRSN 183
CRRRLAGHN+RRR++N
Sbjct: 187 CRRRLAGHNKRRRKAN 202
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 93 KRKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQC 152
K+K KA ++ V CQVE C + K+YH+RHKVC+ HAKAP V + G QRFCQQC
Sbjct: 42 KQKGKATSSSGV---CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQC 98
Query: 153 SRFHVLAEFDDAKKSCRRRLAGHNERRRRSN 183
SRFH L+EFD+AK+SCRRRLAGHNERRR+S
Sbjct: 99 SRFHALSEFDEAKRSCRRRLAGHNERRRKST 129
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 61/77 (79%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
+PRCQVEGC + L K Y+ RH+VC VH+K P+V V G EQRFCQQCSRFH L EFD
Sbjct: 71 IPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLE 130
Query: 165 KKSCRRRLAGHNERRRR 181
K+SCRRRLAGHNERRR+
Sbjct: 131 KRSCRRRLAGHNERRRK 147
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 64/88 (72%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
PRCQ EGC+ L K YHRRHKVCE H+KA VV G QRFCQQCSRFH+L+EFD+
Sbjct: 185 TPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNG 244
Query: 165 KKSCRRRLAGHNERRRRSNASEAMARGS 192
K+SCR+RLA HN RRR+ + S + + +
Sbjct: 245 KRSCRKRLADHNRRRRKCHQSASATQDT 272
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 63/85 (74%)
Query: 108 CQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKS 167
CQV+ C ++ K YHRRHKVCEVHAKA V + G QRFCQQCSRFH L EFD+AK+S
Sbjct: 54 CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 113
Query: 168 CRRRLAGHNERRRRSNASEAMARGS 192
CRRRLAGHNERRR+S+ GS
Sbjct: 114 CRRRLAGHNERRRKSSGESTYGEGS 138
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 63/77 (81%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
VPRCQ++GC++ L K YHR+HKVCE H+K P+V V G E+RFCQQCSRFH ++EFD+
Sbjct: 172 VPRCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEK 231
Query: 165 KKSCRRRLAGHNERRRR 181
K+SCR+RL+ HN RRR+
Sbjct: 232 KRSCRKRLSHHNARRRK 248
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%)
Query: 106 PRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAK 165
P+CQV+ C L K+YHRRHKVCEVH+KA + +V QRFCQQCSRFH+L+EFD+ K
Sbjct: 80 PKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGK 139
Query: 166 KSCRRRLAGHNERRRRS 182
+SCRRRL GHN RRR++
Sbjct: 140 RSCRRRLDGHNRRRRKT 156
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
+P C V+GCD +EYH+RHKVC+VH+K P V ++G +QRFCQQCSRFH L EFD+
Sbjct: 98 MPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEG 157
Query: 165 KKSCRRRLAGHNERRRR 181
K+SCR+RL GHN RRR+
Sbjct: 158 KRSCRKRLDGHNRRRRK 174
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
+P C V+GCD +EYH+RHKVC+VH+K P V ++G +QRFCQQCSRFH L EFD+
Sbjct: 98 MPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEG 157
Query: 165 KKSCRRRLAGHNERRRR 181
K+SCR+RL GHN RRR+
Sbjct: 158 KRSCRKRLDGHNRRRRK 174
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 63/82 (76%)
Query: 107 RCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKK 166
RCQVEGC + L VK Y+ RHKVC +H+K+ +V+V G QRFCQQCSRFH L+EFD K+
Sbjct: 58 RCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKR 117
Query: 167 SCRRRLAGHNERRRRSNASEAM 188
SCRRRLA HNERRR+ + A+
Sbjct: 118 SCRRRLACHNERRRKPQPTTAL 139
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 59/74 (79%)
Query: 108 CQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKS 167
CQV+ C + L K+Y+RRH+VCEVHAKA V G QRFCQQCSRFH L EFD+AK+S
Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRS 122
Query: 168 CRRRLAGHNERRRR 181
CRRRLAGHNERRR+
Sbjct: 123 CRRRLAGHNERRRK 136
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 105 VPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDA 164
V RCQV C+ + +K YH+RH+VC A A VV+ G +R+CQQC +FH+L +FD+
Sbjct: 135 VARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEG 194
Query: 165 KKSCRRRLAGHNERRRR 181
K+SCRR+L HN RR+R
Sbjct: 195 KRSCRRKLERHNNRRKR 211
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,268,117
Number of extensions: 271561
Number of successful extensions: 595
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 595
Number of HSP's successfully gapped: 17
Length of query: 360
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 260
Effective length of database: 8,364,969
Effective search space: 2174891940
Effective search space used: 2174891940
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)