BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0543600 Os04g0543600|AK064289
(444 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10600.1 | chr3:3313969-3317162 FORWARD LENGTH=585 365 e-101
AT5G04770.1 | chr5:1379118-1382304 FORWARD LENGTH=584 353 1e-97
AT4G21120.1 | chr4:11270318-11273775 FORWARD LENGTH=595 265 4e-71
AT1G17120.1 | chr1:5851964-5853736 FORWARD LENGTH=591 231 8e-61
AT2G34960.1 | chr2:14744175-14745884 REVERSE LENGTH=570 228 7e-60
AT3G03720.1 | chr3:925870-930974 REVERSE LENGTH=802 149 2e-36
AT1G58030.1 | chr1:21464185-21468141 REVERSE LENGTH=636 139 4e-33
AT5G36940.1 | chr5:14590330-14594137 FORWARD LENGTH=610 136 2e-32
AT1G05940.1 | chr1:1801365-1803942 REVERSE LENGTH=570 114 1e-25
>AT3G10600.1 | chr3:3313969-3317162 FORWARD LENGTH=585
Length = 584
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 265/441 (60%), Gaps = 16/441 (3%)
Query: 4 GELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNALDFP 63
GE F GAN++M+YVLSNAAV+R FT YL S GI+ + WR V G+ G+N +D
Sbjct: 134 GEFPAFITGANLIMDYVLSNAAVSRGFTAYLGSAFGISTSE-WRFIVSGLPNGFNEIDPI 192
Query: 64 AVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLV------SPH 117
AV ++L +T +CYST+ES+ +NM G G +NL +P
Sbjct: 193 AVIVVLAVTFVICYSTRESSKVNMVLTALHIAFIVFVIVMGFSKGDVKNLTRPDNPENPS 252
Query: 118 GLAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMS 177
G P+GV GV +GAA+VY SYIGYD+ STMAEE++DP + +P+GI+GSV +V LYCLM+
Sbjct: 253 GFFPFGVSGVFNGAAMVYLSYIGYDAVSTMAEEVKDPVKDIPMGISGSVAIVIVLYCLMA 312
Query: 178 LALCAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCV 237
+++ +LPY I AP+SA F + GWEW VAMLGQARY+CV
Sbjct: 313 ISMSMLLPYDLIDAEAPYSAAFSKSEGWEWVTRVVGIGASFGILTSLIVAMLGQARYMCV 372
Query: 238 IARARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVA 297
I R+R+VP W AKVHP T TP+NA+ FLG+ TA +ALFT+L V+ ++SIGTL VFY+VA
Sbjct: 373 IGRSRVVPIWFAKVHPKTSTPVNASAFLGIFTAVLALFTDLNVLLNLVSIGTLFVFYMVA 432
Query: 298 NALIYHRYAKLGANRXXXXXXXXXXXXXXXXXXXXXRRI--HGQCRWGMALFGATSVT-- 353
NA+I+ RY +G ++ G +W + GA++VT
Sbjct: 433 NAVIFRRYVTVGYTEPWPTLSFLCLFSITSILFTLVWQLAPSGPPKW--FILGASTVTAI 490
Query: 354 -ITAMFHCAVRRDMPEPPSEWMVPLMPWPAAASVFLNVFLMTTLKVMSFQRFGLWSFVII 412
I +FHC V + P W VPLMPW S+FLN+FL+ +L S+ RFG +S +++
Sbjct: 491 AIVQIFHCVVPQ--ARIPEFWGVPLMPWTPCVSIFLNIFLLGSLDAPSYIRFGFFSGLVV 548
Query: 413 VFYVCYGVHSTYSAEENEAVN 433
+ YV Y VH++Y AE + +++
Sbjct: 549 LVYVFYSVHASYDAEGDGSLD 569
>AT5G04770.1 | chr5:1379118-1382304 FORWARD LENGTH=584
Length = 583
Score = 353 bits (905), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/435 (43%), Positives = 263/435 (60%), Gaps = 12/435 (2%)
Query: 4 GELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNALDFP 63
GE FF GAN++M+YV+SNAAV+RSFT YL + GI+ WR V G+ KG+N +D
Sbjct: 135 GEFPAFFTGANLVMDYVMSNAAVSRSFTAYLGTAFGIST-SKWRFVVSGLPKGFNEIDPV 193
Query: 64 AVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVSP------H 117
AV ++LV+T+ +C ST+ES+ +NM G G ++NL SP
Sbjct: 194 AVLVVLVITVIICCSTRESSKVNMIMTAFHIAFIFFVIVMGFIKGDSKNLSSPANPEHPS 253
Query: 118 GLAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMS 177
G P+G GV +GAA+VY SYIGYD+ STMAEE+ +P + +PVG++GSV +V+ LYCLM+
Sbjct: 254 GFFPFGAAGVFNGAAMVYLSYIGYDAVSTMAEEVENPVKDIPVGVSGSVAIVTVLYCLMA 313
Query: 178 LALCAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCV 237
+++ +LPY I APFSA FR GWEW VAMLGQARY+CV
Sbjct: 314 VSMSMLLPYDLIDPEAPFSAAFRGSNGWEWVTKVVGIGASFGILTSLLVAMLGQARYMCV 373
Query: 238 IARARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVA 297
I R+R+VP W AK+HP T TP+NA+ FLG+ TA++ALFT+L V+ ++SIGTL VFY+VA
Sbjct: 374 IGRSRVVPFWFAKIHPKTSTPVNASTFLGIFTAALALFTDLNVLLNLVSIGTLFVFYMVA 433
Query: 298 NALIYHRYAKLGANRXXXXXXXXXXXXXXXXXXXXXRRIHGQCRWGMALFGATSVTITAM 357
NALI+ RY +G + ++ + + + GA++V A+
Sbjct: 434 NALIFRRYVPVGPTKPWPTLCFLTLFSITSLVFTLIWKLVPEGKPKAFMLGASAVVAIAI 493
Query: 358 ---FHCAVRRDMPEPPSEWMVPLMPWPAAASVFLNVFLMTTLKVMSFQRFGLWSFVIIVF 414
F C V + P W VP MPW S+FLN+FL+ +L S+ RFG +S +I++
Sbjct: 494 VLSFQCVVPQA--RKPELWGVPFMPWTPCVSIFLNIFLLGSLDAPSYVRFGFFSGLIVLV 551
Query: 415 YVCYGVHSTYSAEEN 429
Y+ YGVH++ AE N
Sbjct: 552 YLFYGVHASSDAEAN 566
>AT4G21120.1 | chr4:11270318-11273775 FORWARD LENGTH=595
Length = 594
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 229/434 (52%), Gaps = 16/434 (3%)
Query: 1 LETGELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNAL 60
+E G+ + F NI++EYV+ AAVARS+T Y A+ +P+ +RI V + + Y+ L
Sbjct: 145 VELGDFMAFIAAGNIILEYVVGGAAVARSWTSYFATLLN-HKPEDFRIIVHKLGEDYSHL 203
Query: 61 DFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVSPHGLA 120
D AV + ++ + TK S+ N AG +N
Sbjct: 204 DPIAVGVCAIICVLAVVGTKGSSRFNYIASIIHMVVILFVIIAGFTKADVKNY---SDFT 260
Query: 121 PYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLAL 180
PYGVRGV AA+++F+YIG+D+ STMAEE ++P R +P+G+ GS++V + YCLM++ L
Sbjct: 261 PYGVRGVFKSAAVLFFAYIGFDAVSTMAEETKNPGRDIPIGLVGSMVVTTVCYCLMAVTL 320
Query: 181 CAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCVIAR 240
C M PY +I APFS F GW+W V +GQARY+ IAR
Sbjct: 321 CLMQPYQQIDPDAPFSVAF-SAVGWDWAKYIVAFGALKGMTTVLLVGAIGQARYMTHIAR 379
Query: 241 ARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVANAL 300
A ++P WLA+V+ TGTP+NAT+ + TA IA FT+L+++ +++S+ TL +F VA AL
Sbjct: 380 AHMMPPWLAQVNAKTGTPINATVVMLAATALIAFFTKLKILADLLSVSTLFIFMFVAVAL 439
Query: 301 IYHRYAKLGANRXXXXXXXXXXXXXXXXXXXXXRRIHGQCRWGMALFGATSVTITA---- 356
+ RY G W + G IT
Sbjct: 440 LVRRYYVTGETSTRDRNKFLVFLGLILASSTAT-----AVYWALEEEGWIGYCITVPIWF 494
Query: 357 MFHCAVRRDMPE--PPSEWMVPLMPWPAAASVFLNVFLMTTLKVMSFQRFGLWSFVIIVF 414
+ A++ +P+ P W VPL+PW +AS+ +N+FL+ ++ SF RF +W+ +++++
Sbjct: 495 LSTVAMKFLVPQARAPKIWGVPLVPWLPSASIAINIFLLGSIDTKSFVRFAIWTGILLIY 554
Query: 415 YVCYGVHSTYSAEE 428
YV +G+H+TY +
Sbjct: 555 YVLFGLHATYDTAK 568
>AT1G17120.1 | chr1:5851964-5853736 FORWARD LENGTH=591
Length = 590
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 220/430 (51%), Gaps = 15/430 (3%)
Query: 1 LETGELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNAL 60
+E G+ + F NIL+E ++ A + RS++ YLAS + D +RI+VD AKG++ L
Sbjct: 156 VELGDFIAFIAAGNILLEAMVGAAGLGRSWSSYLASLVK-NDSDYFRIKVDSFAKGFDLL 214
Query: 61 DFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVSPHGLA 120
D AVA++LV TK ++ LN+ G + NLV
Sbjct: 215 DPVAVAVLLVANGIAMTGTKRTSWLNLITSMVTVCIIVFIVVVGFTHSKTSNLVP---FF 271
Query: 121 PYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLAL 180
PYG +GV+ AA+VY+SY G+D + MAEE P+R +P+G+ GS+ +++ +YCLM+LAL
Sbjct: 272 PYGAKGVVQSAAVVYWSYTGFDMVANMAEETEKPSRDIPIGLVGSMSMITVVYCLMALAL 331
Query: 181 CAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCVIAR 240
M+ YTEI +A +S F + G +W V LGQARY IAR
Sbjct: 332 TMMVKYTEIDANAAYSVAF-AQIGMKWAKYLVGICALKGMTTSLLVGSLGQARYTTQIAR 390
Query: 241 ARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVANAL 300
+ ++P W A VHP TGTP+ AT+ + + ++ I+ FT L+V+ + S TL +F LVA AL
Sbjct: 391 SHMIPPWFALVHPKTGTPIYATLLVTILSSIISFFTSLEVLSSVFSFATLFIFMLVAVAL 450
Query: 301 IYHRYAKLGANRXXXXXXXXXXXXXXXXXXXXXRRIHGQCRWGMALFGATSVTITAMFHC 360
+ RY I W + G + T+T +
Sbjct: 451 LVRRYYVKDVT-----PEAGLLKFLGFLFLIIASSIGVSALWNSGVKGWIAYTVTGVIWF 505
Query: 361 AVRRDMP-----EPPSEWMVPLMPWPAAASVFLNVFLMTTLKVMSFQRFGLWSFVIIVFY 415
+ P W VPL+PW + S+ +N+FL+ +L ++F RF + + V++++Y
Sbjct: 506 IGTLGLALLPKYRVPKVWGVPLVPWLPSFSIAMNLFLIGSLGYVAFLRFIICTMVMLLYY 565
Query: 416 VCYGVHSTYS 425
+ G+H+TY
Sbjct: 566 LFVGLHATYD 575
>AT2G34960.1 | chr2:14744175-14745884 REVERSE LENGTH=570
Length = 569
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 223/440 (50%), Gaps = 20/440 (4%)
Query: 1 LETGELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNAL 60
+E G+ F NIL+E ++ AAVAR++T Y A+ P+A RI+ D ++ G+N L
Sbjct: 139 IELGDFAAFITAGNILLESIVGTAAVARAWTSYFATLLN-RSPNALRIKTD-LSSGFNLL 196
Query: 61 DFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVSPHGLA 120
D AV +I ST+++++LN AG + NL
Sbjct: 197 DPIAVVVIAASATIASISTRKTSLLNWIASAINTLVIFFVIIAGFIHADTSNLTP---FL 253
Query: 121 PYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLAL 180
P+G GV AA+VYF+Y G+DS +TMAEE ++P+R +P+G+ GS+ +++ +YCLM+L+L
Sbjct: 254 PFGPEGVFRAAAVVYFAYGGFDSIATMAEETKNPSRDIPIGLLGSMSIITVIYCLMALSL 313
Query: 181 CAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCVIAR 240
M YT+I +A +S F + G +W V LGQARY+ IAR
Sbjct: 314 SMMQKYTDIDPNAAYSVAF-QSVGMKWGKYLVALGALKGMTTVLLVGALGQARYVTHIAR 372
Query: 241 ARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVANAL 300
++P A VHP TGTP+NA + + + +A IA F+ L V+ ++SI TL +F ++ AL
Sbjct: 373 THMIPPIFALVHPKTGTPINANLLVAIPSALIAFFSGLDVLASLLSISTLFIFTMMPIAL 432
Query: 301 IYHR-YAKLGANRXXXXXXXXXXXXXXXXXXXXXRRIHGQCRWGMALFGA-TSVTITAMF 358
+ R Y + R + WGM G+ T+T F
Sbjct: 433 LVRRYYVRQDTPRVHLIKLITCLLFVVVSS------MGTSAYWGMQRKGSWIGYTVTVPF 486
Query: 359 ----HCAVRRDMPEP--PSEWMVPLMPWPAAASVFLNVFLMTTLKVMSFQRFGLWSFVII 412
+ +P+ P W VPL+PW S+ N+FLM +L M+F RFG+ + ++
Sbjct: 487 WFLGTLGIVFFVPQQRTPKVWGVPLVPWLPCLSIATNIFLMGSLGAMAFVRFGVCTLAML 546
Query: 413 VFYVCYGVHSTYSAEENEAV 432
++Y G+H+T+ + V
Sbjct: 547 LYYFLLGLHATFDMAHQQIV 566
>AT3G03720.1 | chr3:925870-930974 REVERSE LENGTH=802
Length = 801
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 158/305 (51%), Gaps = 4/305 (1%)
Query: 4 GELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITEPDAWRIQVDGIAKGYNALDFP 63
GE + + G ++++Y + +A+AR T LAS G + + I +D
Sbjct: 303 GEGIAWLVGWALVLDYTIGGSAIARGITPNLASFFGGLDNLPVFLARQTIPGVGIVVDPC 362
Query: 64 AVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVS---PHGLA 120
A LI+++T+ LC+ KES+ + G + V P G
Sbjct: 363 AALLIMIVTILLCFGIKESSTVQAIVTSVNVCTLVFIIVVGGYLACKTGWVGYDLPSGYF 422
Query: 121 PYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLAL 180
P+G+ G+L G+A+V+FSYIG+D+ ++ AEE+++P R LP+GI ++L+ LY L+S+ +
Sbjct: 423 PFGLNGILAGSAVVFFSYIGFDTVTSTAEEVKNPQRDLPLGIGIALLICCILYMLLSVVI 482
Query: 181 CAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCVIAR 240
++PY + P S+ F + +G +W ++L Q R +AR
Sbjct: 483 VGLVPYYSLNPDTPISSAFGD-SGMQWAAYILTTGAITALCASLLGSLLAQPRIFMAMAR 541
Query: 241 ARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVANAL 300
L+PA+ +++ P T P+ +TI +G+ A++A F ++ + EM+S+GTL+ F VA +
Sbjct: 542 DGLLPAFFSEISPRTQVPVKSTIAIGVLAAALAFFMDVAQLSEMVSVGTLMAFTAVAVCV 601
Query: 301 IYHRY 305
+ RY
Sbjct: 602 LVLRY 606
>AT1G58030.1 | chr1:21464185-21468141 REVERSE LENGTH=636
Length = 635
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 153/308 (49%), Gaps = 10/308 (3%)
Query: 4 GELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITE--PDAW-RIQVDGIAKGYNAL 60
GE V + G +++EY + +AVAR + LA G + P R Q+ G+ +
Sbjct: 118 GEGVAWIIGWALILEYTIGGSAVARGISPNLALIFGGEDGLPAILARHQIPGLDI---VV 174
Query: 61 DFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVS---PH 117
D A L+ V+T LC KES AG + G P
Sbjct: 175 DPCAAILVFVVTGLLCMGIKESTFAQGIVTAVNVCVLLFVIVAGSYLGFKTGWPGYELPT 234
Query: 118 GLAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMS 177
G P+GV G+ G+A V+F++IG+DS ++ AEE+R+P R LP+GI ++L+ +LY ++S
Sbjct: 235 GFFPFGVDGMFAGSATVFFAFIGFDSVASTAEEVRNPQRDLPIGIGLALLLCCSLYMMVS 294
Query: 178 LALCAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCV 237
+ + ++PY + P S+ F +W A+L Q R L
Sbjct: 295 IVIVGLIPYYAMDPDTPISSAFASH-DMQWAVYLITLGAVMALCSALMGALLPQPRILMA 353
Query: 238 IARARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVA 297
+AR L+P+ + ++ T P+ AT+ GLC A++A F ++ + M+S+GTLL F +VA
Sbjct: 354 MARDGLLPSIFSDINKRTQVPVKATVATGLCAATLAFFMDVSQLAGMVSVGTLLAFTMVA 413
Query: 298 NALIYHRY 305
+++ RY
Sbjct: 414 ISVLILRY 421
>AT5G36940.1 | chr5:14590330-14594137 FORWARD LENGTH=610
Length = 609
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 153/308 (49%), Gaps = 10/308 (3%)
Query: 4 GELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGITE--PDAW-RIQVDGIAKGYNAL 60
GE V + G +++EY + + VAR + LA G + P R Q+ G+ +
Sbjct: 107 GEGVAWLIGWALILEYTIGGSTVARGISPNLAMIFGGEDCLPTILARHQIPGLDI---VV 163
Query: 61 DFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVS---PH 117
D A L+ ++T C KES AG + V P
Sbjct: 164 DPCAAVLVFIVTGLCCLGVKESTFAQGIVTTANVFVMIFVIVAGSYLCFKTGWVGYELPT 223
Query: 118 GLAPYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMS 177
G PYGV G+L G+A V+F+YIG+D+ ++MAEE+++P R LP+GI S+L+ LY ++S
Sbjct: 224 GYFPYGVDGMLTGSATVFFAYIGFDTVASMAEEVKNPRRDLPLGIGISLLLCCLLYMMVS 283
Query: 178 LALCAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCV 237
+ + ++PY + P S+ F G +W ++L Q R L
Sbjct: 284 VVIVGLVPYYAMDPDTPISSAFSSH-GIQWAAYLINLGAVMALCSALMGSILPQPRILMA 342
Query: 238 IARARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVA 297
+AR L+P++ + V+ T P+N TI G+C A +A F ++ + M+S+GTL+ F +VA
Sbjct: 343 MARDGLLPSYFSYVNQRTQVPINGTITTGVCAAILAFFMDVSQLAGMVSVGTLVAFTMVA 402
Query: 298 NALIYHRY 305
+L+ RY
Sbjct: 403 ISLLIVRY 410
>AT1G05940.1 | chr1:1801365-1803942 REVERSE LENGTH=570
Length = 569
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 9/305 (2%)
Query: 5 ELVGFFGGANILMEYVLSNAAVARSFTDYLASTCGI-----TEPDAWRIQVDGIAKGYNA 59
E+ F ++++Y + A+++RS Y + + W + G +
Sbjct: 127 EITAFLVFVQLMLDYHIGAASISRSLASYAVALLELFPALKGSIPLWMGSGKELLGGLLS 186
Query: 60 LDFPAVALILVLTLCLCYSTKESAMLNMXXXXXXXXXXXXXXXAGLWNGSARNLVSPHGL 119
L+ A L+ +LTL LC +ES+ +N AG + N SP
Sbjct: 187 LNILAPILLALLTLVLCQGVRESSAVNSVMTATKVVIVLVVICAGAFEIDVANW-SP--F 243
Query: 120 APYGVRGVLDGAAIVYFSYIGYDSASTMAEEIRDPARALPVGIAGSVLVVSALYCLMSLA 179
AP G + VL GA +V+FSY+G+D+ + AEE ++P R LP+GI GS+LV +LY + L
Sbjct: 244 APNGFKAVLTGATVVFFSYVGFDAVANSAEESKNPQRDLPIGIMGSLLVCISLYIGVCLV 303
Query: 180 LCAMLPYTEIAESAPFSAVFREKAGWEWXXXXXXXXXXXXXXXXXXVAMLGQARYLCVIA 239
L M+P++ ++E AP + F K G ++ V + Q+R +
Sbjct: 304 LTGMVPFSLLSEDAPLAEAFSSK-GMKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLG 362
Query: 240 RARLVPAWLAKVHPSTGTPMNATIFLGLCTASIALFTELQVVFEMISIGTLLVFYLVANA 299
R L+P+ +++HP+ TP+++ I+ G+ +A + + ++S+GTL + +VA
Sbjct: 363 RDGLLPSIFSRIHPTLHTPLHSQIWCGIVAGVLAGIFNVHSLSHILSVGTLTGYSVVAAC 422
Query: 300 LIYHR 304
++ R
Sbjct: 423 VVALR 427
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,602,475
Number of extensions: 249536
Number of successful extensions: 788
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 12
Length of query: 444
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 342
Effective length of database: 8,310,137
Effective search space: 2842066854
Effective search space used: 2842066854
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 113 (48.1 bits)