BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0541100 Os04g0541100|AK107139
(605 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76880.1 | chr1:28865594-28867931 FORWARD LENGTH=604 175 6e-44
AT1G76890.2 | chr1:28873211-28875203 REVERSE LENGTH=576 165 6e-41
AT1G33240.1 | chr1:12051859-12054320 REVERSE LENGTH=670 155 7e-38
AT5G28300.1 | chr5:10292789-10295101 REVERSE LENGTH=620 115 1e-25
AT5G47660.1 | chr5:19313008-19314636 FORWARD LENGTH=399 95 1e-19
AT3G10000.1 | chr3:3076874-3078907 FORWARD LENGTH=482 88 1e-17
AT5G03680.1 | chr5:957858-960760 FORWARD LENGTH=592 82 6e-16
AT3G25990.1 | chr3:9504846-9506703 REVERSE LENGTH=373 66 5e-11
AT1G13450.1 | chr1:4612999-4615115 REVERSE LENGTH=407 60 3e-09
AT5G63420.1 | chr5:25400515-25405807 FORWARD LENGTH=912 54 2e-07
AT5G01380.1 | chr5:155784-157451 REVERSE LENGTH=324 49 6e-06
AT2G38250.1 | chr2:16018384-16019500 FORWARD LENGTH=290 49 7e-06
>AT1G76880.1 | chr1:28865594-28867931 FORWARD LENGTH=604
Length = 603
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 85/92 (92%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWPK E++ALI+LR LD +YQE GPKGPLWEEIS+GMRRLG+NR+SKRCKEKWENINKY
Sbjct: 408 RWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMRRLGFNRNSKRCKEKWENINKY 467
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVIYRRKH 448
FKKVKESNKKRPEDSKTCPYFHQLD +YR ++
Sbjct: 468 FKKVKESNKKRPEDSKTCPYFHQLDALYRERN 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 47/54 (87%)
Query: 1 KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEALHAAA 54
K+AE GY R+AKKCKEKFENV+KY+KRTKEGR G+ +GK+YRFF +LEAL + +
Sbjct: 97 KMAEHGYIRNAKKCKEKFENVYKYHKRTKEGRTGKSEGKTYRFFDQLEALESQS 150
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWP+ E AL+++R ++ + +++ KGPLWEE+S M GY R++K+CKEK+EN+ KY
Sbjct: 61 RWPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENVYKY 120
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVI 443
K+ KE + E KT +F QL+ +
Sbjct: 121 HKRTKEGRTGKSE-GKTYRFFDQLEAL 146
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 5 LGYKRSAKKCKEKFENVHKYYKRTKEGRAGR-QDGKSYRFFTELEALH 51
LG+ R++K+CKEK+EN++KY+K+ KE R +D K+ +F +L+AL+
Sbjct: 448 LGFNRNSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALY 495
>AT1G76890.2 | chr1:28873211-28875203 REVERSE LENGTH=576
Length = 575
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWPKTEV+ALI++R L+ YQE G KGPLWEEIS+GMRRLGYNRS+KRCKEKWENINKY
Sbjct: 397 RWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKY 456
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVIYRRKH 448
FKKVKESNKKRP DSKTCPYFHQL+ +Y ++
Sbjct: 457 FKKVKESNKKRPLDSKTCPYFHQLEALYNERN 488
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 1 KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEAL 50
K+ ELGYKRS+KKCKEKFENV+KY+KRTKEGR G+ +GK+YRFF ELEA
Sbjct: 77 KMMELGYKRSSKKCKEKFENVYKYHKRTKEGRTGKSEGKTYRFFEELEAF 126
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWP+ E AL+++R E+D ++++ K PLWEEIS M LGY RSSK+CKEK+EN+ KY
Sbjct: 41 RWPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKY 100
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVI 443
K+ KE + E KT +F +L+
Sbjct: 101 HKRTKEGRTGKSE-GKTYRFFEELEAF 126
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 5 LGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQ-DGKSYRFFTELEALH 51
LGY RSAK+CKEK+EN++KY+K+ KE R D K+ +F +LEAL+
Sbjct: 437 LGYNRSAKRCKEKWENINKYFKKVKESNKKRPLDSKTCPYFHQLEALY 484
>AT1G33240.1 | chr1:12051859-12054320 REVERSE LENGTH=670
Length = 669
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 81/93 (87%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWPK E+ ALI LR ++ RYQ+ PKG LWEEIS+ M+R+GYNR++KRCKEKWENINKY
Sbjct: 435 RWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKY 494
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVIYRRKHL 449
+KKVKESNKKRP+D+KTCPYFH+LD++YR K L
Sbjct: 495 YKKVKESNKKRPQDAKTCPYFHRLDLLYRNKVL 527
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 1 KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEALH 51
KL ELGYKRS+KKCKEKFENV KYYKRTKE R GR DGK+Y+FF++LEAL+
Sbjct: 98 KLLELGYKRSSKKCKEKFENVQKYYKRTKETRGGRHDGKAYKFFSQLEALN 148
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
RWP+ E AL+++R ++D +++ K PLWE +S + LGY RSSK+CKEK+EN+ KY
Sbjct: 62 RWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKY 121
Query: 417 FKKVKESNKKRPEDSKTCPYFHQLDVI 443
+K+ KE+ R D K +F QL+ +
Sbjct: 122 YKRTKETRGGR-HDGKAYKFFSQLEAL 147
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 5 LGYKRSAKKCKEKFENVHKYYKRTKEGRAGR-QDGKSYRFFTELEALH 51
+GY R+AK+CKEK+EN++KYYK+ KE R QD K+ +F L+ L+
Sbjct: 475 MGYNRNAKRCKEKWENINKYYKKVKESNKKRPQDAKTCPYFHRLDLLY 522
>AT5G28300.1 | chr5:10292789-10295101 REVERSE LENGTH=620
Length = 619
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 64/98 (65%), Gaps = 10/98 (10%)
Query: 357 RWPKTEVQALIQLRMEL---------DMRYQETGPKG-PLWEEISSGMRRLGYNRSSKRC 406
RWPK EV ALI +R + D T K PLWE IS M +GY RS+KRC
Sbjct: 459 RWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGYKRSAKRC 518
Query: 407 KEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDVIY 444
KEKWENINKYF+K K+ NKKRP DS+TCPYFHQL +Y
Sbjct: 519 KEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALY 556
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 1 KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQ-DGKSYRFFTELEALHA 52
K+ E+GYKRSAK+CKEK+EN++KY+++TK+ R D ++ +F +L AL++
Sbjct: 505 KMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALYS 557
>AT5G47660.1 | chr5:19313008-19314636 FORWARD LENGTH=399
Length = 398
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 66/90 (73%), Gaps = 4/90 (4%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETG-PKGPLWEEISSGMRRLGYNRSSKRCKEKWENINK 415
RWP+ EVQALI R +++ ++TG KG +W+EIS+ M+ GY RS+K+CKEKWEN+NK
Sbjct: 303 RWPQEEVQALISSRSDVE---EKTGINKGAIWDEISARMKERGYERSAKKCKEKWENMNK 359
Query: 416 YFKKVKESNKKRPEDSKTCPYFHQLDVIYR 445
Y+++V E +K+PE SKT YF +L Y+
Sbjct: 360 YYRRVTEGGQKQPEHSKTRSYFEKLGNFYK 389
>AT3G10000.1 | chr3:3076874-3078907 FORWARD LENGTH=482
Length = 481
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGM-RRLGYNRSSKRCKEKWENINK 415
RWP+ E L+++R LD +++E KGPLW+E+S M GY RS K+C+EK+EN+ K
Sbjct: 88 RWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENLYK 147
Query: 416 YFKKVKESNKKRPEDSKTCPYFHQLDVIY 444
Y+KK KE R +D K +F QL+ IY
Sbjct: 148 YYKKTKEGKSGRRQDGKNYRFFRQLEAIY 176
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 4 ELGYKRSAKKCKEKFENVHKYYKRTKEGRAG-RQDGKSYRFFTELEALHAAA 54
E GY RS KKC+EKFEN++KYYK+TKEG++G RQDGK+YRFF +LEA++ +
Sbjct: 128 EHGYTRSGKKCREKFENLYKYYKKTKEGKSGRRQDGKNYRFFRQLEAIYGES 179
>AT5G03680.1 | chr5:957858-960760 FORWARD LENGTH=592
Length = 591
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 45/51 (88%)
Query: 4 ELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEALHAAA 54
E GY+RS KKC+EKFEN++KYY++TKEG+AGRQDGK YRFF +LEAL+ +
Sbjct: 159 EHGYQRSGKKCREKFENLYKYYRKTKEGKAGRQDGKHYRFFRQLEALYGDS 209
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGM-RRLGYNRSSKRCKEKWENINK 415
RWP+ E L+++R LD +++E KGPLW+E+S M GY RS K+C+EK+EN+ K
Sbjct: 119 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 178
Query: 416 YFKKVKESNKKRPEDSKTCPYFHQLDVIY 444
Y++K KE R +D K +F QL+ +Y
Sbjct: 179 YYRKTKEGKAGR-QDGKHYRFFRQLEALY 206
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 358 WPKTEVQALIQLRMELDMRYQETGPKGP---LWEEISSGMRRLGYN-RSSKRCKEKWENI 413
W + E+ L+++R +D +QE LWEEI++ + +LG++ RS+ CKEKWE I
Sbjct: 422 WGEQEILKLMEIRTSMDSTFQEILGGCSDEFLWEEIAAKLIQLGFDQRSALLCKEKWEWI 481
Query: 414 -NKYFKKVKESNKKRPEDSKTCPYFH 438
N K+ K+ NKKR ++S +C ++
Sbjct: 482 SNGMRKEKKQINKKRKDNSSSCGVYY 507
>AT3G25990.1 | chr3:9504846-9506703 REVERSE LENGTH=373
Length = 372
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 358 WPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYF 417
W + E + LI LR E+D + + LWE+IS MR G++RS C +KW NI K F
Sbjct: 55 WAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNILKEF 114
Query: 418 KKVKESNKKRPEDSKT-CPYFHQLDVIYRRK 447
KK K+ K T Y+++++ I+R +
Sbjct: 115 KKAKQHEDKATSGGSTKMSYYNEIEDIFRER 145
>AT1G13450.1 | chr1:4612999-4615115 REVERSE LENGTH=407
Length = 406
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 358 WPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYF 417
W + E ++LI R +D + + LWE+ISS MR G++RS C +KW N+ K F
Sbjct: 87 WVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEF 146
Query: 418 KKVKESNKKRPEDSKTCPYFHQLDVIYRRK 447
KK K + R S Y+ +++ I R +
Sbjct: 147 KKAKHHD--RGNGSAKMSYYKEIEDILRER 174
>AT5G63420.1 | chr5:25400515-25405807 FORWARD LENGTH=912
Length = 911
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 357 RWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKY 416
+W E++ +I++R EL R+Q + LWEEISS + G NRS +CK W ++
Sbjct: 820 KWKPEEIKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASL--- 876
Query: 417 FKKVKESNKKRPEDSKTC-PYFHQLDVIY 444
+K +ES K E SKT P+F ++ I
Sbjct: 877 IQKYEES--KADERSKTSWPHFEDMNNIL 903
>AT5G01380.1 | chr5:155784-157451 REVERSE LENGTH=324
Length = 323
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 358 WPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYF 417
W E + L+ +R ELD + ET LWE +++ M G+ RS+++CK KW+N+ +
Sbjct: 52 WSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRY 111
Query: 418 KKVKESNKKRPED-SKTCPYFHQLDVIY 444
K + + P+ + P+++++ I+
Sbjct: 112 KACETTE---PDAIRQQFPFYNEIQSIF 136
>AT2G38250.1 | chr2:16018384-16019500 FORWARD LENGTH=290
Length = 289
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 358 WPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYF 417
W E + LI +R ELD + ET LWE IS+ MR + RS ++CK KW+N+ F
Sbjct: 42 WSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRF 101
Query: 418 K 418
K
Sbjct: 102 K 102
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,607,123
Number of extensions: 189445
Number of successful extensions: 746
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 739
Number of HSP's successfully gapped: 27
Length of query: 605
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 501
Effective length of database: 8,255,305
Effective search space: 4135907805
Effective search space used: 4135907805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)