BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0540300 Os04g0540300|Os04g0540300
(372 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G09790.1 | chr1:3168568-3170819 REVERSE LENGTH=455 308 4e-84
AT3G02210.1 | chr3:409352-411478 REVERSE LENGTH=453 227 1e-59
AT5G60920.1 | chr5:24511466-24513932 REVERSE LENGTH=457 225 2e-59
AT3G29810.1 | chr3:11728212-11730158 FORWARD LENGTH=442 217 9e-57
AT5G15630.1 | chr5:5084842-5086545 FORWARD LENGTH=432 208 4e-54
AT5G60950.1 | chr5:24527157-24528005 REVERSE LENGTH=205 106 2e-23
AT5G49270.1 | chr5:19972021-19974398 REVERSE LENGTH=664 62 5e-10
AT4G16120.1 | chr4:9116591-9119138 REVERSE LENGTH=662 60 2e-09
AT4G27110.1 | chr4:13599236-13601521 REVERSE LENGTH=669 55 8e-08
AT3G16860.1 | chr3:5759643-5762104 REVERSE LENGTH=654 52 4e-07
>AT1G09790.1 | chr1:3168568-3170819 REVERSE LENGTH=455
Length = 454
Score = 308 bits (788), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 229/405 (56%), Gaps = 76/405 (18%)
Query: 11 FVCCLSSRFADAYDPVDPNGNIIINWDFQ-SIENVYTVMVSVHNHQLYRHIEQPGWRLSW 69
F+ + AD YDP+DP G III WD S + V V++ N Q YRH+E+PGW+LSW
Sbjct: 24 FMIMIDKMVADGYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSW 83
Query: 70 RWAGNEIIWGMTGAEATEQGDCHRIRGA-TRPHCCEKQPVIVDLPPGTPYNNQVSSCCRG 128
W E+IW M GAE TEQG+C + PHCC ++P IVDL PG N QV++CCRG
Sbjct: 84 HWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRG 143
Query: 129 GVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCSNATKVN-- 186
GVL+S++Q++ +AF M VG + DG +PS F +GVPGYSC NAT V+
Sbjct: 144 GVLTSMSQDHANHVSAFHMTVG-----SSPDGPEEFNMPSNFDIGVPGYSCDNATSVSPT 198
Query: 187 --ATSEGEKPELPAGDGEAV--------APVFRCTDHM----------CPV--------- 217
+T +G + EAV +P +C + CP
Sbjct: 199 KFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSSSH 258
Query: 218 -------------------RVHWHVKIS-----YREYWRVKV----------TITNYNQV 243
V VK S R +W VKV T TN+N +
Sbjct: 259 CVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTM 318
Query: 244 KNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEY-GTLNDTGMFWGIQYYNEMMLQD---GN 299
KNY++WNLVV HPNL+S+ Q+FSFNY+ L Y ++NDTGMFWG+Q+YN+++LQ+ GN
Sbjct: 319 KNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGN 378
Query: 300 VQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLP 344
VQTE++LKKD +FTF GWAFPRR+ F+G ECVMP PD +P LP
Sbjct: 379 VQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLP 423
>AT3G02210.1 | chr3:409352-411478 REVERSE LENGTH=453
Length = 452
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 140/200 (70%), Gaps = 11/200 (5%)
Query: 179 CSNATKVNATSEGEKPELPA-----GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRV 233
C N ++ + + P + + G + P+ +CT HMCPVR+HWHVK++Y++YWRV
Sbjct: 252 CRNTSQPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRV 311
Query: 234 KVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEM 293
KVTITN+N NYS WNLVVQHPN +LTQ FSFNY+PL Y ++NDTG+ WGI++YN++
Sbjct: 312 KVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDL 371
Query: 294 MLQD---GNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDS 350
++Q GNVQ+E++ +K+ S FTF GWAFPRR+YF+G CVMPPPD YP LPN G S
Sbjct: 372 LMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTG--S 429
Query: 351 RVSAAQLIASSCLLLPFIFL 370
S L A+ LLL +FL
Sbjct: 430 HKSVGSLFAAMALLL-IVFL 448
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 113/172 (65%), Gaps = 9/172 (5%)
Query: 20 ADAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIW 78
++AYDP+DP+GNI + WD + + Y V+V+N Q YRHI+ PGW L W WA E+IW
Sbjct: 31 SEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIW 90
Query: 79 GMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNN 138
GM G + TEQGDC + +G T PHCC+K P +VDL PG+PYN Q+++CCRGGVL+S Q+
Sbjct: 91 GMNGGQTTEQGDCSKFKG-TIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDP 149
Query: 139 RTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGV--PGYSCSNATKVNAT 188
T+ +AFQ+ VG + T + R +P F + PGY+CS A V T
Sbjct: 150 ATAVSAFQLTVG--QAGTTNKTVR---VPKNFTLKAPGPGYTCSPAKIVKPT 196
>AT5G60920.1 | chr5:24511466-24513932 REVERSE LENGTH=457
Length = 456
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 135/194 (69%), Gaps = 12/194 (6%)
Query: 172 VGVPGYSC---SNATKVNATSEGEKPEL------PAGDGEAVAPVFRCTDHMCPVRVHWH 222
VG P +C +N T+ A + + P L P G + P+ +CT HMCP+RVHWH
Sbjct: 246 VGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWH 305
Query: 223 VKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTG 282
VK +Y+EYWRVK+TITN+N NY+ WNLV QHPNL ++TQ+FSFNY+ L Y LNDT
Sbjct: 306 VKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTA 365
Query: 283 MFWGIQYYNEMMLQD---GNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQ 339
M WG+++YN+ + + GNVQ+E++ +KD+S FTF GWAFPRR+YF+G CVMPPPD
Sbjct: 366 MLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDS 425
Query: 340 YPLLPNGGPDSRVS 353
YP LPNGG S+ S
Sbjct: 426 YPFLPNGGSRSQFS 439
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 6 LILFVFVCCLSSRFA--DAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQ 62
L L++ SS F +AYD +DP GNI + WD S + Y +V++ N Q YRHI+
Sbjct: 18 LALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQS 77
Query: 63 PGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQV 122
PGW L W+WA E+IW M GA+ TEQGDC + +G PHCC+K P +VDL PGTPYN Q+
Sbjct: 78 PGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQI 136
Query: 123 SSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCSNA 182
++CC+GGV++S Q+ T+ ++FQ+ VG T + R P + G G PGY+C A
Sbjct: 137 ANCCKGGVMNSWVQDPATAASSFQISVGA--AGTTNKTVRVPRNFTLMGPG-PGYTCGPA 193
Query: 183 TKVNAT 188
V T
Sbjct: 194 KIVRPT 199
>AT3G29810.1 | chr3:11728212-11730158 FORWARD LENGTH=442
Length = 441
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 135/198 (68%), Gaps = 16/198 (8%)
Query: 179 CSNATKVNATSEGEKPEL-PAGDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTI 237
C N+++ + + + PA + P+ +CT HMCP+RVHWHVK SY+EYWRVKV I
Sbjct: 247 CQNSSQAGTCVDPKIASVVPALGKNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAI 306
Query: 238 TNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQD 297
TN+N NYS WNLVVQHPN +LT+LFSFNY+PL Y +NDT M WGI++YN+ + Q
Sbjct: 307 TNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQA 366
Query: 298 ---GNVQTEMILKKDKSDFTFSGGWAFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSA 354
GNVQ+E++ +K+ +FTF GWAFPRR+YF+G CVMPPPD YP LPN P+
Sbjct: 367 GPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASPN----- 421
Query: 355 AQLIASSCLLLPFIFLIM 372
IA+S PF+ L++
Sbjct: 422 ---IATS----PFVILLI 432
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 114/186 (61%), Gaps = 8/186 (4%)
Query: 7 ILFVFVCCLSSRFA---DAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQ 62
L +F+C +S +AYD +DP GNI I WD S + Y +V++ N Q YRHIE
Sbjct: 10 FLLLFLCSWTSFTFTTTEAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEA 69
Query: 63 PGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQV 122
PGW+L W W E+IW M G +ATEQGDC + +G PHCC+K P IVDL PGTPYN Q+
Sbjct: 70 PGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNI-PHCCKKTPAIVDLLPGTPYNQQI 128
Query: 123 SSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCSNA 182
S+CCRGGV+S+ Q+ T+ ++FQ+ VG + T + R P + G PGY+C A
Sbjct: 129 SNCCRGGVISAWAQDPATAISSFQISVG--QSGTTNTTVRAPRNITLKAPG-PGYTCGPA 185
Query: 183 TKVNAT 188
V +
Sbjct: 186 KLVKPS 191
>AT5G15630.1 | chr5:5084842-5086545 FORWARD LENGTH=432
Length = 431
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 127/167 (76%), Gaps = 7/167 (4%)
Query: 205 APVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQL 264
P+ +CT HMCPVRVHWHVK +Y++YWRVK+ ITN+N N++ W L +QHPNL ++TQ+
Sbjct: 266 TPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQV 325
Query: 265 FSFNYQPLIEYGTLNDTGMFWGIQYYNEMMLQ---DGNVQTEMILKKDKSDFTFSGGWAF 321
FSF+Y+P+ YG++NDTGMF+G ++YN+++++ GNVQ+E++L+KD+ FTF GWAF
Sbjct: 326 FSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAF 385
Query: 322 PRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIASSCLLLPFI 368
PR+VYF+G EC++PPPD YP LPN + S + I LLL FI
Sbjct: 386 PRKVYFNGDECMLPPPDSYPFLPNSAQGNFASFSLTI----LLLLFI 428
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 105/170 (61%), Gaps = 5/170 (2%)
Query: 20 ADAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIW 78
A AYDP+DP+GNI I WD S + Y V+++N Q+YRHI+ PGW L W WA E+IW
Sbjct: 18 ATAYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIW 77
Query: 79 GMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNN 138
M GA+ TEQGDC + +G PHCC+K P +VDL PG PYN Q S+CC+GGV+ + Q+
Sbjct: 78 SMVGAQTTEQGDCSKFKGNV-PHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDP 136
Query: 139 RTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPGYSCSNATKVNAT 188
+ + FQ+ G T + + P + G G PGY+C A V +T
Sbjct: 137 SAAVSQFQVSAG--LAGTTNKTVKLPKNFTLLGPG-PGYTCGPAKIVPST 183
>AT5G60950.1 | chr5:24527157-24528005 REVERSE LENGTH=205
Length = 204
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 17/147 (11%)
Query: 6 LILFVFVCCLSSRFADAYDPVDPN-GNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQP 63
L+L F C +S+ + + N GNI + WD + + Y +V+ +N+Q R I P
Sbjct: 11 LLLVSFSCLIST------EALTSNYGNITVKWDLLNWTPDGYVAVVTAYNYQKQRSI--P 62
Query: 64 GWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVS 123
GW++SWR E+IW M GA+ T QG C +G P C ++P +VDL PGTP+N Q++
Sbjct: 63 GWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGNI-PQSCVRKPTVVDLLPGTPFNQQIA 121
Query: 124 SCCRGGVLSSLTQNNRTSTAAFQMVVG 150
+CC+ GVL S +AFQ+ VG
Sbjct: 122 NCCKSGVLKP------GSESAFQLSVG 142
>AT5G49270.1 | chr5:19972021-19974398 REVERSE LENGTH=664
Length = 663
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 210 CTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQ--HPNLRSLTQLFSF 267
C D+ C V ++WH+ YR W V++TI N+ ++ ++ +W L VQ P L + +SF
Sbjct: 492 CGDN-CGVSINWHMASDYRGGWTVRITIFNWGEI-DFPNWFLAVQMKKPALLGFEKAYSF 549
Query: 268 NYQPLIEYGTLNDTGMFWGIQYYNEMMLQ----DGNVQTEMILKKDKSDFTFSGGW---- 319
N L G +N+T G+ + ++ + D + I K +S FS
Sbjct: 550 NASLLSVDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNIRIPGKQQSVIQFSKKLTPGI 609
Query: 320 ------AFPRRVYFDGHECVMPPPDQYPLLPNGGPDSRVSAAQLIA 359
FP +V F+G EC++ PD P+ G + ++ I
Sbjct: 610 NVAERDGFPAKVIFNGEECLL--PDLLPMASGGRRNGAITVLSFIT 653
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 30 GNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQ 88
G++ I +D ++ + Y V++ NH ++ W LS+ W +E I M GA T
Sbjct: 216 GDLTIMYDVIRAYDQNYLTEVTMENHNPLGRLDH--WELSFDWMRDEFIQKMQGAYPTVV 273
Query: 89 GDCHRIRGA----------TRPHCCEKQPVIVDLPPGTPYNN---QVSSCCRGGVLSSLT 135
I G CE++P+I+DLPP ++ + SCCR G +
Sbjct: 274 DATKCIFGPQSLIYTGLDFADVLTCERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRI 333
Query: 136 QNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSR----FGVGVPGYSCSNATKVNAT 188
+ S + F M V D +R P + G P YSC +V T
Sbjct: 334 MDPSKSVSVFTMQVAKMP----PDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPT 386
>AT4G16120.1 | chr4:9116591-9119138 REVERSE LENGTH=662
Length = 661
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 28/161 (17%)
Query: 12 VCCLSSRFADAYDPVD------PNGNIIINWDF-QSIENVYTVMVSVHNHQLYRHIEQPG 64
VCC+ D + +D +G++ I +D +S + Y V++ NH ++
Sbjct: 193 VCCIPDPDYDNREIIDNEFLPRKDGDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLDN-- 250
Query: 65 WRLSWRWAGNEIIWGMTGA--EATEQGDCHRIRGATRPH----------CCEKQPVIVDL 112
W+LS+ W +E I+ M GA + DC + G H C ++P ++DL
Sbjct: 251 WKLSFDWMRDEFIYTMKGAYPSIVDSSDC--VDGPQAKHYQDLDFSNVLSCARRPTVIDL 308
Query: 113 PPGTPYNNQ----VSSCCRGGVLSSLTQNNRTSTAAFQMVV 149
PP T YN+ + CCR G + + + S++ FQM V
Sbjct: 309 PP-TKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQV 348
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 210 CTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLR-SLTQLFSFN 268
C D+ C V ++WH+ YR W +VT+ N+ + ++ DW VQ N + +SFN
Sbjct: 494 CGDN-CGVSINWHLATDYRGGWTARVTVFNWGET-DFVDWFTAVQMKNAAPGFEKAYSFN 551
Query: 269 YQPLIEYGTLNDTGMFWGIQYYNEMMLQ-DGN--VQTEMILKKDKSDFTFS--------- 316
I N+T G+ N ++ + DG ++ I K +S +F+
Sbjct: 552 AS-TIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINV 610
Query: 317 -GGWAFPRRVYFDGHECVMP 335
GG FP +V+F+G EC +P
Sbjct: 611 PGGDGFPSKVFFNGEECSLP 630
>AT4G27110.1 | chr4:13599236-13601521 REVERSE LENGTH=669
Length = 668
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 30/201 (14%)
Query: 12 VCCLSSRFADAYDPVDP------NGNIIINWD-FQSIENVYTVMVSVHNHQLYRHIEQPG 64
VCC + A + V +G++ I +D Q+ + Y V++ N ++
Sbjct: 195 VCCKRNPKFKAKEKVKTKFMPRQHGDLNIIYDVLQAYASSYMAQVTIDNTSPLGRLDH-- 252
Query: 65 WRLSWRWAGNEIIWGMTGAEATEQG--DCHRIRGA--------TRPHCCEKQPVIVDLPP 114
W L+W W E I M GA A E+ +C + ++ C+K+P+I DLP
Sbjct: 253 WNLTWEWMRGEFIHSMRGAYAAEKNTLECLSSKAGQFYGDLDFSQVANCQKKPIIKDLPA 312
Query: 115 GTPYNN---QVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRF- 170
+N ++ CC+ G L + S A FQ+ V D +R P R
Sbjct: 313 ERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQV----YKVPPDQNRTAFFPPRNW 368
Query: 171 ---GVGVPGYSCSNATKVNAT 188
G+ P Y C +V+AT
Sbjct: 369 KIDGIVNPTYKCGPPIRVDAT 389
>AT3G16860.1 | chr3:5759643-5762104 REVERSE LENGTH=654
Length = 653
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 12 VCCL------SSRFADAYDPVDPNGNIIINWDF-QSIENVYTVMVSVHNHQLYRHIEQPG 64
VCC +S+ + P G++ I +D ++ ++ Y+ V++ NH L ++
Sbjct: 187 VCCTPNPNITTSKIGQKFLPRQ-EGDLTIMYDVTRAYQSSYSAQVTIENHNLLGRLDN-- 243
Query: 65 WRLSWRWAGNEIIWGMTGA--EATEQGDC--------HRIRGATRPHCCEKQPVIVDLPP 114
W LS+ W +E ++ GA + DC ++ + C ++P I+DLP
Sbjct: 244 WDLSFMWMKDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDLP- 302
Query: 115 GTPYNN----QVSSCCRGGVLSSLTQNNRTSTAAFQMVV 149
T YN+ ++ CCR G + + + S + FQ+ V
Sbjct: 303 LTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEV 341
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 210 CTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLR-SLTQLFSFN 268
C D+ C V ++WH+ YR W +VT+ N+ ++ DW V+ N + +SFN
Sbjct: 486 CGDN-CGVSINWHLATDYRGGWTARVTLFNWGDT-DFVDWFTAVELRNAAPGFQKAYSFN 543
Query: 269 YQPLIEYGTLNDTGMFWGIQYYNEMMLQ-DGNVQTE--MILKKDKSDFTFSGGW------ 319
+I N T + G+ N ++ + DG +E I K +S +F+
Sbjct: 544 GS-IIAVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKLTPGIKV 602
Query: 320 ----AFPRRVYFDGHECVMPPPDQYPLLPNGGPDSR-VSAAQLIASSCLLLPFI 368
FP +V F+G EC +P +LP + VS LI + L L F+
Sbjct: 603 GSKDGFPTKVLFNGQECSLP-----SVLPTSNSHRKHVSTFLLILTPFLALLFL 651
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,091,246
Number of extensions: 401554
Number of successful extensions: 842
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 821
Number of HSP's successfully gapped: 18
Length of query: 372
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,364,969
Effective search space: 2275271568
Effective search space used: 2275271568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)