BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0534400 Os04g0534400|AK071369
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240 275 2e-74
AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257 259 8e-70
AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240 226 1e-59
AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638 201 2e-52
AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150 160 8e-40
AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221 153 7e-38
AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387 152 2e-37
AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267 56 2e-08
AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288 54 5e-08
AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315 54 7e-08
>AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240
Length = 239
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 175/217 (80%), Gaps = 10/217 (4%)
Query: 5 SKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPR 64
S ELL I+P++L+F FE KKQISCS+ L N+TD+Y+AFKVKTT+PKKYCVRPN+G+V PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 65 STSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLK 124
S+S+V+VTMQAQ+EAPAD+QCKDKFL+Q VV + G T KDVT EMF+K +G+ V+E KL+
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 125 VVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLNYQDTTRESDEPPLLSATRAHKDAEDV 184
VVYV PPRPPSPVREGSEEGSSPRAS+S+ GN + D T P SA R DA+D
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNAS--DFT----AAPRFSADRV--DAQD- 172
Query: 185 TSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRRE 221
+ SE AL+++LTEE+NSA+Q NN+L +E+D +RRE
Sbjct: 173 -NSSEARALVTKLTEEKNSAVQLNNRLQQELDQLRRE 208
>AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257
Length = 256
Score = 259 bits (662), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/251 (54%), Positives = 177/251 (70%), Gaps = 11/251 (4%)
Query: 1 MGSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGI 60
+G + ELL +EPL+L+F FE KKQISCS+ LTN+TD+ +AFKVKTT+PKKYCVRPN+G+
Sbjct: 15 IGMSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGV 74
Query: 61 VPPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDE 120
V PRST +V+VTMQAQ+EAP+DMQCKDKFL+Q V+ + G T K+VT EMF+K +G+ V+E
Sbjct: 75 VLPRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEE 134
Query: 121 RKLKVVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLNYQDTTRESDEPPLLSATRAHKD 180
KL+V YV PPRPPSPV EGSEEGSSPRAS+S+ G+ + S E ++ H++
Sbjct: 135 TKLRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH-----GSEFSFERFIVDNKAGHQE 189
Query: 181 AEDVTSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRREISK-QNXXXXXXXXXXXXX 239
+ SE ALI++LTEE+ SAIQ NN+L E+D +RRE K Q+
Sbjct: 190 -----NTSEARALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGL 244
Query: 240 XXXXXXYIMKR 250
YIMKR
Sbjct: 245 IGLILGYIMKR 255
>AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240
Length = 239
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 163/226 (72%), Gaps = 25/226 (11%)
Query: 7 ELLGIEPLELRFSFETKKQISCSMQLTNRTD-DYIAFKVKTTSPKKYCVRPNSGIVPPRS 65
+L+ I P EL+F FE KKQ SCSMQLTN+T +AFKVKTT+P+KYCVRPN+G+V P
Sbjct: 5 DLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGD 64
Query: 66 TSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKV 125
+ +V VTMQAQ+EAP DMQCKDKFLVQ+VVV++GTT+K+V EMFNK +G V+++ KL+V
Sbjct: 65 SCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRV 124
Query: 126 VYVQPPRPPSPVREGSEEGSSPRASL----SEGGNLNYQDTTRESDEPPLLSATRAHKDA 181
VY+ P PPSPV EGSEEG+SP ASL S+ +L + D +R +E
Sbjct: 125 VYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASL-FDDVSRTFEE------------- 169
Query: 182 EDVTSD--SETSALISRLTEERNSAIQQNNKLLEEMDLVRREISKQ 225
TS+ SE ++IS+LTEE+ SA QQ+ KL E++++R+E SK+
Sbjct: 170 ---TSEKSSEAWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKK 212
>AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638
Length = 637
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 141/203 (69%), Gaps = 3/203 (1%)
Query: 5 SKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPR 64
S ELL I+P++++F E K++SCS+ LTN+T++Y+AFK KTT+ KKY VRPN G+V PR
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 65 STSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLK 124
S+ +V+V MQA +EAPADMQC+DK L Q VV TT KDVT EMF+K +G+ +E +LK
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 125 VVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLN--YQDTTRESDEPPLLSATRAHKDAE 182
V+YV PP+PPSPV+EG+EEGSSPRAS+S+ GN + + D R S PL S + D
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEAFVDMLR-SLLVPLFSNAASSTDDH 351
Query: 183 DVTSDSETSALISRLTEERNSAI 205
+T + R E RNS +
Sbjct: 352 GITLPQYQVFINFRGDELRNSFV 374
Score = 183 bits (464), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 122/177 (68%), Gaps = 11/177 (6%)
Query: 1 MGSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGI 60
M +D ELL + +++RF E KQ SCS+ LTN+TD+Y+AFK +TT PK YCV+P+ G+
Sbjct: 1 MSTD--ELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGV 58
Query: 61 VPPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDE 120
V PRS+ +V+V MQA +EAPAD QCKDK L Q VV GT K+VT EMF+K +G+ V+E
Sbjct: 59 VLPRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEE 118
Query: 121 RKLKVVYVQPPRPPSPVREGSEEGSSPRASLSEGGN---------LNYQDTTRESDE 168
K++YV PP+P SPV+EG E+GSSP AS+S+ GN + D R SDE
Sbjct: 119 TIFKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGNASEVFVGPSVGIVDLIRMSDE 175
>AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150
Length = 149
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 98/122 (80%)
Query: 7 ELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPRST 66
ELL IEP+ L+F FE KKQ+SCS+ LTN+TD+ +AFKVKTT+ YCVRPN G++ P+ST
Sbjct: 5 ELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKST 64
Query: 67 SDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKVV 126
V+VTMQAQ+E P+DMQ +KF++QSV+ + G T K+VT EMF+K SG+VV+E KL+V
Sbjct: 65 CKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKLRVT 124
Query: 127 YV 128
YV
Sbjct: 125 YV 126
>AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221
Length = 220
Score = 153 bits (387), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 128/225 (56%), Gaps = 39/225 (17%)
Query: 2 GSDSKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIV 61
G +L+ I+P EL+F FE +KQ C +++ N+T++Y+AFKVKTTSPKKY VRPN+G++
Sbjct: 3 GVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVI 62
Query: 62 PPRSTSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDER 121
P + + VT+QAQRE P DMQCKDKFL+QS +V T ++ + F K SG + E
Sbjct: 63 QPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTEC 122
Query: 122 KLKVVYVQPPRPPSPVREGSEEGSSPRASLSEGGNLNYQDTTRESDEPPLLSATRAHKDA 181
KLKV Y+ PS + SE G++ + D
Sbjct: 123 KLKVSYI----TPSTTQRSSESGAT-------------------------------NGDG 147
Query: 182 EDVTSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRREISKQN 226
+ SET + I RL EER++A++Q +L E++ VRR +++N
Sbjct: 148 Q----SSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQRN 188
>AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387
Length = 386
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
Query: 8 LLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPRSTS 67
LL I+P L+F+ + KKQ SC +QLTN T Y+AFKVKTTSPKKYCVRPN G+V P+ST
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 68 DVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKVVY 127
+ V MQA +E P DM CKDKFL+QS V+ TT +D+T MF+K G ++E KL+V
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 128 VQPPRPP--SPV 137
V P P SP+
Sbjct: 125 VPPSDSPELSPI 136
>AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267
Length = 266
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 16 LRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPRSTSDVIVTMQA 75
L F +E KQ+ +++L N + + AFK +TT+PK +RP G++ P + V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 76 QR-----EAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKVVYVQP 130
+ + P + + K KF + S+ V G + E+F++ V E+ L+V+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFIDA 201
Query: 131 PRP 133
RP
Sbjct: 202 DRP 204
>AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288
Length = 287
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 5 SKELLGIEP-LELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPP 63
+K L ++P +L F +E KQ+ ++++ N + ++AFK +TT PK +RP I+ P
Sbjct: 96 TKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAP 155
Query: 64 RSTSDVIVTM------QAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNV 117
++I T+ E P + + KF + S+ + T D E+F + +V
Sbjct: 156 --GEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMKVPT---DYMPELFEEQKDHV 210
Query: 118 VDERKLKVVYVQPPRPPS 135
+E+ ++VV++ P P S
Sbjct: 211 SEEQVMRVVFLDPENPNS 228
>AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315
Length = 314
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 16 LRF-SF-ETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPRSTSDVIVTM 73
L+F SF E KQ+ ++++ N + ++AFK +TT+PK +RP I+ P T +I T+
Sbjct: 133 LKFLSFNEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGET--IIATV 190
Query: 74 ------QAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKVVY 127
E P D + + KF + S+ V D E+F++ +V E+ L+V++
Sbjct: 191 FKFVEPPENNEKPMDQRSRVKFKIMSLKV---KGPMDYVPELFDEQKDDVSKEQILRVIF 247
Query: 128 VQPPR 132
+ P R
Sbjct: 248 LDPER 252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.309 0.126 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,098,580
Number of extensions: 221932
Number of successful extensions: 769
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 11
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 110 (47.0 bits)