BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0533300 Os04g0533300|AK106182
         (206 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23750.1  | chr5:8010004-8011453 REVERSE LENGTH=203            116   1e-26
AT3G61260.1  | chr3:22675403-22676701 REVERSE LENGTH=213          115   2e-26
AT3G48940.1  | chr3:18142863-18144163 REVERSE LENGTH=176          110   5e-25
AT2G45820.1  | chr2:18863147-18864576 REVERSE LENGTH=191          109   1e-24

>AT5G23750.1 | chr5:8010004-8011453 REVERSE LENGTH=203
          Length = 202

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 72/126 (57%)

Query: 79  GSNDRDVALARVETEKRNSLIXXXXXXXXXXXXXXXXXXLSAILSWENTKKANIXXXXXX 138
           GS +RD  LARVETEKR SLI                  LS+I SWEN KKA +      
Sbjct: 77  GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKK 136

Query: 139 XXXXXXXXXXXXXXXXXXXVAIVHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGHAPK 198
                              +A +HKEAEEKRAM+EAKRGEE+LKAEE+AAKYRATG APK
Sbjct: 137 MEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPK 196

Query: 199 KLIGCF 204
           KL GC 
Sbjct: 197 KLFGCM 202



>AT3G61260.1 | chr3:22675403-22676701 REVERSE LENGTH=213
          Length = 212

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 55  DDSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVETEKRNSLIXXXXXXXXXXXXXXX 114
           DDSKAL +VEK  +EP   KPA   S DRDV LA +  EKR S +               
Sbjct: 64  DDSKALTVVEKPVEEPAPAKPA-SASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKA 122

Query: 115 XXXLSAILSWENTKKANIXXXXXXXXXXXXXXXXXXXXXXXXXVAIVHKEAEEKRAMVEA 174
              ++ + +WEN+KKA +                         VA +HKEAEE+RAM+EA
Sbjct: 123 EKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEA 182

Query: 175 KRGEEVLKAEEMAAKYRATGHAPKKLIGCF 204
           KRGE+VLKAEE AAKYRATG  PK   GCF
Sbjct: 183 KRGEDVLKAEETAAKYRATGIVPKATCGCF 212



>AT3G48940.1 | chr3:18142863-18144163 REVERSE LENGTH=176
          Length = 175

 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 83/150 (55%), Gaps = 3/150 (2%)

Query: 55  DDSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVETEKRNSLIXXXXXXXXXXXXXXX 114
           DDSKA+ +V  VA + P E   + GS  RD  L R+E +KR SLI               
Sbjct: 29  DDSKAIVLV--VAAKEPTE-DKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKA 85

Query: 115 XXXLSAILSWENTKKANIXXXXXXXXXXXXXXXXXXXXXXXXXVAIVHKEAEEKRAMVEA 174
              +S++ +WEN+KKA++                         +A +HKEAEEKRAM EA
Sbjct: 86  QKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEA 145

Query: 175 KRGEEVLKAEEMAAKYRATGHAPKKLIGCF 204
           KRGE+VLKAEEMAAKYRATG AP KL G F
Sbjct: 146 KRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175



>AT2G45820.1 | chr2:18863147-18864576 REVERSE LENGTH=191
          Length = 190

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 81/149 (54%), Gaps = 1/149 (0%)

Query: 56  DSKALAIVEKVADEPPAEKPAQGGSNDRDVALARVETEKRNSLIXXXXXXXXXXXXXXXX 115
           +SKALA+VEK  +E   +K A  GS DRDV LA +E EK+ S I                
Sbjct: 43  ESKALAVVEKPIEEHTPKK-ASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQ 101

Query: 116 XXLSAILSWENTKKANIXXXXXXXXXXXXXXXXXXXXXXXXXVAIVHKEAEEKRAMVEAK 175
             +S + +WEN+KKA +                         VA +HK AEEKRAMVEAK
Sbjct: 102 KKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAK 161

Query: 176 RGEEVLKAEEMAAKYRATGHAPKKLIGCF 204
           +GEE+LKAEEM AKYRATG  PK   GCF
Sbjct: 162 KGEELLKAEEMGAKYRATGVVPKATCGCF 190



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.309    0.125    0.338 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,154,412
Number of extensions: 49745
Number of successful extensions: 174
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 164
Number of HSP's successfully gapped: 6
Length of query: 206
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 112
Effective length of database: 8,529,465
Effective search space: 955300080
Effective search space used: 955300080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 109 (46.6 bits)