BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0531100 Os04g0531100|AK063584
(144 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63220.1 | chr1:23449017-23450244 FORWARD LENGTH=148 193 2e-50
AT3G55470.1 | chr3:20564356-20566092 FORWARD LENGTH=157 99 1e-21
AT4G00467.1 | chr4:214846-216076 REVERSE LENGTH=203 85 1e-17
AT4G34150.1 | chr4:16355035-16356955 FORWARD LENGTH=248 60 4e-10
AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021 56 8e-09
AT1G05500.1 | chr1:1625098-1628940 FORWARD LENGTH=561 54 2e-08
AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338 54 4e-08
AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386 50 3e-07
AT5G11100.1 | chr5:3532402-3535221 FORWARD LENGTH=570 50 5e-07
AT4G15740.1 | chr4:8964912-8966318 REVERSE LENGTH=469 48 2e-06
AT4G00700.1 | chr4:286260-289369 FORWARD LENGTH=1007 47 3e-06
AT5G47710.1 | chr5:19330470-19331178 FORWARD LENGTH=167 47 3e-06
AT3G61300.1 | chr3:22687662-22690580 FORWARD LENGTH=973 46 6e-06
>AT1G63220.1 | chr1:23449017-23450244 FORWARD LENGTH=148
Length = 147
Score = 193 bits (491), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 110/143 (76%)
Query: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 60
M GTLEV+LV AKGLE+ D+L NMDPY L CR+Q+QKS+VA G G+ PEWNETF+F+V
Sbjct: 1 MPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTV 60
Query: 61 THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGL 120
+ TEL K+ D D GT+DD VGEATI LE ++ EGSIPPT YNVVK+EEY+GEI V L
Sbjct: 61 SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVAL 120
Query: 121 TFTPEDDRDRGLSEEDIGGWKQS 143
+F P ++R RG+ EE GGWK S
Sbjct: 121 SFKPSENRSRGMDEESYGGWKNS 143
>AT3G55470.1 | chr3:20564356-20566092 FORWARD LENGTH=157
Length = 156
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 14/155 (9%)
Query: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVAS-GKGSDPEWNETFMFS 59
M G LEV L+ KGL+ +D+L +DPY ++ + Q +KSSVA G +P WN+ +
Sbjct: 1 MAVGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWR 60
Query: 60 VTHNAT----ELIIKLMDSDSGTDDDFVGEATISLEAIYTEG------SIPPTVYNVVKE 109
+ +LI+K+MD D+ + DDF+GEAT+ ++ + G + PT YN+V
Sbjct: 61 AEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVDS 120
Query: 110 E-EYRGEIKVGLTFTPEDDRDRGLSEEDIGGWKQS 143
+ + GE+ +G++++ +DRG+ E GGWK S
Sbjct: 121 DLSFVGELLIGVSYSLL--QDRGMDGEQFGGWKHS 153
>AT4G00467.1 | chr4:214846-216076 REVERSE LENGTH=203
Length = 202
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 11/141 (7%)
Query: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMF-- 58
M +G LEV L+ A G+ +T+++ Y +L+C ++E +S ++ G + WN+ F+F
Sbjct: 1 MKRGILEVFLIDAHGITHTNFIGTPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDF 60
Query: 59 --SVTHNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGS------IPPTVYNVVKEE 110
S T + ++++D + D FVGE I L I TEG I P YNVV E+
Sbjct: 61 PMSQWKKLTYIKLRILDKELFNDGGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVVLED 120
Query: 111 E-YRGEIKVGLTFTPEDDRDR 130
+ ++GE+KVGL F D R
Sbjct: 121 DTFKGELKVGLRFIATDKLQR 141
>AT4G34150.1 | chr4:16355035-16356955 FORWARD LENGTH=248
Length = 247
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 2 VQG-TLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 60
+QG LEV +VG + L++T++ DPY VL+ + ++ + G + + E F+F++
Sbjct: 7 IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66
Query: 61 THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTE 96
+L + + +S++ + DDF+G ATI L+ + ++
Sbjct: 67 IEGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQ 102
>AT1G03370.1 | chr1:830968-834996 FORWARD LENGTH=1021
Length = 1020
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNAT 65
L+V +V A+ L D DPY L+ Q ++ V K +P+W E F F V
Sbjct: 3 LQVRVVEARNLPAMDLNGFSDPYVRLQLGKQRSRTKVVK-KNLNPKWTEDFSFGVDDLND 61
Query: 66 ELIIKLMDSDSGTDDDFVGEATISLEAIY 94
EL++ ++D D +DDFVG+ +S+ ++
Sbjct: 62 ELVVSVLDEDKYFNDDFVGQVRVSVSLVF 90
>AT1G05500.1 | chr1:1625098-1628940 FORWARD LENGTH=561
Length = 560
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSD--PEWNETFMFSVT 61
G LEV LV AK L N D + DP+A + R +K+ + +D P WNE F F V
Sbjct: 262 GMLEVKLVQAKNLTNKDLVGKSDPFAKMFIRPLREKTKRSKTINNDLNPIWNEHFEFVVE 321
Query: 62 HNATE-LIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEY------RG 114
+T+ L++++ D + + +G A I L + G + +VK+ E RG
Sbjct: 322 DASTQHLVVRIYDDEGVQASELIGCAQIRLCEL-EPGKVKDVWLKLVKDLEIQRDTKNRG 380
Query: 115 EIKVGLTFTP 124
E+ + L + P
Sbjct: 381 EVHLELLYIP 390
>AT4G21160.1 | chr4:11284694-11286532 FORWARD LENGTH=338
Length = 337
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHN 63
G L+V + + D + + DPY VL Q+ +S+V +P WNE M SV HN
Sbjct: 181 GLLKVTIKKGTNMAIRDMMSS-DPYVVLTLGQQKAQSTVVKSN-LNPVWNEELMLSVPHN 238
Query: 64 ATELIIKLMDSDSGTDDDFVGEATISLEAIYT 95
+ +++ D D+ + DD +GEA I ++ + T
Sbjct: 239 YGSVKLQVFDYDTFSADDIMGEAEIDIQPLIT 270
>AT3G07940.1 | chr3:2529542-2531368 FORWARD LENGTH=386
Length = 385
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHN 63
G ++V +V L D + + DPY +L Q K+ V +P WNET M S+
Sbjct: 229 GLIKVNVVKGTNLAVRDVMTS-DPYVILALGQQSVKTRVIKN-NLNPVWNETLMLSIPEP 286
Query: 64 ATELIIKLMDSDSGTDDDFVGEATISLEAIYT 95
L + + D D+ + DDF+GEA I ++ + +
Sbjct: 287 MPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVS 318
>AT5G11100.1 | chr5:3532402-3535221 FORWARD LENGTH=570
Length = 569
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCR--SQEQKSSVASGKGSDPEWNETFMFSVT 61
G L+V +V AK L N D + DPYA++ R K + +P WNE F F V
Sbjct: 264 GKLDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTISNSLNPIWNEHFEFIVE 323
Query: 62 HNATE-LIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEY------RG 114
+T+ L +++ D + +G A + L + G + +VK+ E RG
Sbjct: 324 DVSTQHLTVRVFDDEGVGSSQLIGAAQVPLNEL-VPGKVKDIWLKLVKDLEIQRDTKNRG 382
Query: 115 EIKVGLTFTP 124
++++ L + P
Sbjct: 383 QVQLELLYCP 392
>AT4G15740.1 | chr4:8964912-8966318 REVERSE LENGTH=469
Length = 468
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 1 MVQGTLEVLLVGAKGLENTDYLCNMDPYAVLKC------RSQEQKSSVASGKGSDPEWNE 54
M TLE+ +V A + + D MD YAV+ + Q K+ + GS+P WN
Sbjct: 36 MENPTLELKIVSASDVNHIDATDKMDVYAVVSINGDTTQQKQAAKTPIDYDGGSNPTWNH 95
Query: 55 TFMFSVTHNATE-----LIIKLMDS-DSGTDDDFVGEATISLEAIYTEGSIPP 101
T FSV + +KL G +D ++GE +S++ + IPP
Sbjct: 96 TVKFSVNEREANEGLLTITVKLFSYWLEGDNDLYLGEVNVSVQDLLASNPIPP 148
>AT4G00700.1 | chr4:286260-289369 FORWARD LENGTH=1007
Length = 1006
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFS---VTH 62
L V +V A+ L N D ++DPY V+K + + K +DPEWN+ F F+ +
Sbjct: 270 LYVRVVKARDLPNKDLTGSLDPYVVVKI-GNFKGVTTHFNKNTDPEWNQVFAFAKDNLQS 328
Query: 63 NATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVG 119
N E+++K D D DDFVG L + + +PP + + + YR E K G
Sbjct: 329 NFLEVMVK--DKDI-LLDDFVGIVKFDLREV--QSRVPPD--SPLAPQWYRLENKRG 378
>AT5G47710.1 | chr5:19330470-19331178 FORWARD LENGTH=167
Length = 166
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 4 GTLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHN 63
G L+V ++ K L D+ + DPY ++K ++ K+ V + +P WNE F++
Sbjct: 6 GLLQVTVIQGKKLVIRDFKSS-DPYVIVKLGNESAKTKVINN-CLNPVWNEELNFTLKDP 63
Query: 64 ATELIIKLMDSDSGTDDDFVGEATISLEAIYT 95
A L +++ D D DD +G A++SL+ + +
Sbjct: 64 AAVLALEVFDKDRFKADDKMGHASLSLQPLIS 95
>AT3G61300.1 | chr3:22687662-22690580 FORWARD LENGTH=973
Length = 972
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 6 LEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSVTHNAT 65
L + +V A+ L + D ++DPY +K + K+ K +P WNE F FS ++ +
Sbjct: 251 LFIKIVKARNLPSMDLTGSLDPYIEVKLGNYTGKTK-HFEKNQNPVWNEVFAFSKSNQQS 309
Query: 66 ELI-IKLMDSDSGTDDDFVGEATISLEAIYT----EGSIPPTVYNVVKEEEYRGEIKVGL 120
++ + +MD D DDFVG L I T + + P Y V E+ GEI + +
Sbjct: 310 NVLEVIVMDKDM-VKDDFVGLIRFDLNQIPTRVAPDSPLAPEWYRVNNEKG--GEIMLAV 366
Query: 121 TFTPEDD 127
F + D
Sbjct: 367 WFGTQAD 373
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,402,167
Number of extensions: 144279
Number of successful extensions: 381
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 400
Number of HSP's successfully gapped: 18
Length of query: 144
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 55
Effective length of database: 8,666,545
Effective search space: 476659975
Effective search space used: 476659975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 106 (45.4 bits)